FFCP PHASE1:Hg19::chr1:64013668..64013680,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84455 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29379 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000460678_5end | |||
|cluster_id=chr1:64013668..64013680,+ | |||
|coexpression_cluster_id=C72 | |||
|description=CAGE_peak_7_at_EFCAB7_5end | |||
|id=chr1:64013668..64013680,+ | |||
|ontology_enrichment_celltype=CL:0000569!6.11e-13!4;CL:0000011!6.11e-13!4;CL:0002623!3.36e-10!3 | |||
|ontology_enrichment_celltype_v019=CL:0002540;3.57e-30;6!CL:0002092;2.00e-18;10!CL:0002570;7.29e-11;8!CL:0000048;4.01e-08;58!CL:0000723;3.01e-07;61!CL:0000134;6.11e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002540,3.40e-30,6;CL:0002092,1.94e-18,10;CL:0002570,8.47e-11,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000166!3.80e-15!21;UBERON:0000161!2.13e-13!35;UBERON:0000165!8.26e-13!28;UBERON:0000930!8.26e-13!28;UBERON:0000078!6.00e-12!18;UBERON:0001896!4.56e-10!3;UBERON:0005290!4.56e-10!3;UBERON:0010096!4.56e-10!3;UBERON:0001723!1.03e-09!3;UBERON:0001033!1.03e-09!3;UBERON:0010056!1.03e-09!3;UBERON:0001044!1.07e-08!6;UBERON:0003293!1.07e-08!6;UBERON:0003294!1.07e-08!6;UBERON:0010047!1.07e-08!6;UBERON:0000167!1.07e-08!6;UBERON:0003102!1.62e-08!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;1.87e-21;1!UBERON:0000026;1.87e-21;1!UBERON:0008784;1.87e-21;1!UBERON:0006058;1.87e-21;1!UBERON:0003663;1.87e-21;1!UBERON:0004256;1.87e-21;1!UBERON:0004708;1.87e-21;1!UBERON:0002101;1.87e-21;1!UBERON:0004709;1.87e-21;1!UBERON:0002529;1.87e-21;1!UBERON:0010538;1.87e-21;1!UBERON:0003661;1.87e-21;1!UBERON:0010890;1.87e-21;1!UBERON:0002471;1.87e-21;1!UBERON:0001383;1.87e-21;1!UBERON:0010758;1.87e-21;1!UBERON:0010707;1.87e-21;1!UBERON:0000978;1.87e-21;1!UBERON:0002103;1.87e-21;1!UBERON:0001665;1.87e-21;1!UBERON:0003823;1.87e-21;1!UBERON:0000154;1.87e-21;1!UBERON:0010709;1.87e-21;1!UBERON:0002371;1.78e-15;12!UBERON:0001013;2.30e-13;14!UBERON:0005090;2.02e-11;2!UBERON:0001630;2.02e-11;2!UBERON:0001474;1.53e-10;18!UBERON:0004765;1.77e-07;26!UBERON:0002405;3.19e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,1.88e-21,1;UBERON:0001389,1.88e-21,1;UBERON:0000026,1.88e-21,1;UBERON:0008784,1.88e-21,1;UBERON:0006058,1.88e-21,1;UBERON:0003663,1.88e-21,1;UBERON:0004256,1.88e-21,1;UBERON:0004708,1.88e-21,1;UBERON:0002101,1.88e-21,1;UBERON:0004709,1.88e-21,1;UBERON:0002529,1.88e-21,1;UBERON:0010538,1.88e-21,1;UBERON:0003661,1.88e-21,1;UBERON:0010890,1.88e-21,1;UBERON:0002471,1.88e-21,1;UBERON:0001383,1.88e-21,1;UBERON:0004357,1.88e-21,1;UBERON:0004347,1.88e-21,1;UBERON:0005420,1.88e-21,1;UBERON:0005732,1.88e-21,1;UBERON:0010758,1.88e-21,1;UBERON:0010707,1.88e-21,1;UBERON:0000978,1.88e-21,1;UBERON:0002103,1.88e-21,1;UBERON:0001665,1.88e-21,1;UBERON:0003823,1.88e-21,1;UBERON:0000154,1.88e-21,1;UBERON:0010709,1.88e-21,1;UBERON:0005733,1.88e-21,1;UBERON:0005730,1.88e-21,1;UBERON:0001013,2.35e-13,14;UBERON:0005090,2.02e-11,2;UBERON:0001630,2.02e-11,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45650098894541,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0.773043412653187,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0.256278298511402,0,0.160853921143607,0,0,0.177561725313127,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0.330569830721956,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75809815126273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0.573409195690071,0.443716206147409,0.248385611765534,0,0,0,0.285465333544967,0,0,0,0.298509605773748,1.40227985908335,1.10961172300523,1.13641803165053,1.25783950876288,1.77962244319307,1.14420034198462,0.756154618816195,0.15543720058278,0.443565449968902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.736423801007363,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0.414432328326074,0.3414369541879,0.691259661814092,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,0,6.47428837187895,12.5248624364621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,0,0,0,0.12729431655633,0,0.653150243690884,0.342233301085281,0.0673520530145875,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@EFCAB7 | |||
}} |
Latest revision as of 20:54, 18 September 2015
Short description: | p7@EFCAB7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_EFCAB7_5end |
Coexpression cluster: | C72_skeletal_tongue_throat_heart_diaphragm_penis_left |
Association with transcript: | 0bp_to_ENST00000460678_5end |
EntrezGene: | EFCAB7 |
HGNC: | 29379 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of the bone marrow | 3.40e-30 | 6 |
bone marrow cell | 1.94e-18 | 10 |
mesenchymal stem cell of adipose | 8.47e-11 | 8 |
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 1.88e-21 | 1 |
soleus muscle | 1.88e-21 | 1 |
appendage | 1.88e-21 | 1 |
lower limb segment | 1.88e-21 | 1 |
multi-limb segment region | 1.88e-21 | 1 |
hindlimb muscle | 1.88e-21 | 1 |
hindlimb zeugopod muscle | 1.88e-21 | 1 |
paired limb/fin | 1.88e-21 | 1 |
limb | 1.88e-21 | 1 |
pelvic appendage | 1.88e-21 | 1 |
limb segment | 1.88e-21 | 1 |
paired limb/fin segment | 1.88e-21 | 1 |
limb muscle | 1.88e-21 | 1 |
pelvic complex muscle | 1.88e-21 | 1 |
zeugopod | 1.88e-21 | 1 |
muscle of leg | 1.88e-21 | 1 |
paired limb/fin bud | 1.88e-21 | 1 |
limb bud | 1.88e-21 | 1 |
pelvic appendage bud | 1.88e-21 | 1 |
limb/fin field | 1.88e-21 | 1 |
subdivision of organism along appendicular axis | 1.88e-21 | 1 |
appendage girdle complex | 1.88e-21 | 1 |
leg | 1.88e-21 | 1 |
hindlimb | 1.88e-21 | 1 |
triceps surae | 1.88e-21 | 1 |
hindlimb zeugopod | 1.88e-21 | 1 |
posterior region of body | 1.88e-21 | 1 |
pelvic complex | 1.88e-21 | 1 |
limb field | 1.88e-21 | 1 |
hindlimb/pelvic fin field | 1.88e-21 | 1 |
adipose tissue | 2.35e-13 | 14 |
muscle structure | 2.02e-11 | 2 |
muscle organ | 2.02e-11 | 2 |