FFCP PHASE1:Hg19::chr21:45826259..45826283,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7226 | |EntrezGene=7226 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=12339 | |HGNC=12339 | ||
|TSSclassifier=strong | |||
|UniProt=B4DWB3 | |UniProt=B4DWB3 | ||
|association_with_transcript=-350bp_to_AK301451_5end | |association_with_transcript=-350bp_to_AK301451_5end | ||
|cluster_id=chr21:45826259..45826283,+ | |||
|description=CAGE_peak_6_at_TRPM2_5end | |description=CAGE_peak_6_at_TRPM2_5end | ||
|id=chr21:45826259..45826283,+ | |id=chr21:45826259..45826283,+ | ||
|ontology_enrichment_celltype=CL:1000507!9.89e-13!12;CL:1000494!9.89e-13!12;CL:1000497!1.29e-12!18;CL:0002518!1.29e-12!18;CL:1000449!1.34e-11!16;CL:0000243!3.80e-10!15;CL:0000125!3.80e-10!15;CL:0000030!3.80e-10!15;CL:0000339!3.80e-10!15;CL:0002681!4.74e-09!13;CL:0002584!4.74e-09!13;CL:0000239!5.52e-09!3;CL:1000615!5.52e-09!3;CL:0002306!5.52e-09!3;CL:0000095!6.79e-09!17;CL:0000123!6.79e-09!17;CL:0002586!3.39e-08!3;CL:0000077!1.49e-07!19 | |ontology_enrichment_celltype=CL:1000507!9.89e-13!12;CL:1000494!9.89e-13!12;CL:1000497!1.29e-12!18;CL:0002518!1.29e-12!18;CL:1000449!1.34e-11!16;CL:0000243!3.80e-10!15;CL:0000125!3.80e-10!15;CL:0000030!3.80e-10!15;CL:0000339!3.80e-10!15;CL:0002681!4.74e-09!13;CL:0002584!4.74e-09!13;CL:0000239!5.52e-09!3;CL:1000615!5.52e-09!3;CL:0002306!5.52e-09!3;CL:0000095!6.79e-09!17;CL:0000123!6.79e-09!17;CL:0002586!3.39e-08!3;CL:0000077!1.49e-07!19 | ||
|ontology_enrichment_celltype_v019=CL:0000239;1.77e-15;3!CL:1000615;1.77e-15;3!CL:0002306;1.77e-15;3!CL:1000497;1.69e-10;17!CL:0002518;1.69e-10;17!CL:1000507;2.16e-10;10!CL:1000494;2.16e-10;10!CL:0002149;2.17e-08;6!CL:0002255;2.17e-08;6!CL:1000449;4.24e-07;15!CL:1000415;7.19e-07;2!CL:0000054;9.53e-07;2!CL:0000137;9.53e-07;2!CL:0000092;9.53e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.56e-15,3;CL:1000615,2.56e-15,3;CL:0002306,2.56e-15,3;CL:1000497,1.87e-10,17;CL:0002518,1.87e-10,17;CL:1000507,2.24e-10,10;CL:1000494,2.24e-10,10;CL:0002149,2.17e-08,6;CL:0002255,2.17e-08,6;CL:1000449,4.34e-07,15;CL:1000415,7.20e-07,2;CL:0000054,8.52e-07,2;CL:0000137,8.52e-07,2;CL:0000092,8.52e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.88e-09!239;DOID:162!1.42e-08!235;DOID:120!2.24e-07!27;DOID:193!9.93e-07!29 | |||
|ontology_enrichment_disease_v019=DOID:0060085;3.08e-12;1!DOID:3165;3.08e-12;1!DOID:0060121;3.08e-12;1!DOID:2438;3.08e-12;1!DOID:4418;3.08e-12;1!DOID:3001;2.17e-08;6!DOID:200;9.53e-07;2!DOID:4305;9.53e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,2.46e-12,1;DOID:3165,2.46e-12,1;DOID:0060121,2.46e-12,1;DOID:2438,2.46e-12,1;DOID:4418,2.46e-12,1;DOID:3001,2.17e-08,6;DOID:200,8.52e-07,2;DOID:4305,8.52e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0009773!9.89e-13!12;UBERON:0001231!9.89e-13!12;UBERON:0004810!9.89e-13!12;UBERON:0000058!1.30e-11!26;UBERON:0004211!1.34e-11!16;UBERON:0001285!1.34e-11!16;UBERON:0007684!1.34e-11!16;UBERON:0003220!1.34e-11!16;UBERON:0004208!1.34e-11!16;UBERON:0000353!4.82e-11!17;UBERON:0006555!8.33e-11!17;UBERON:0005103!8.33e-11!17;UBERON:0000083!8.33e-11!17;UBERON:0009201!8.33e-11!17;UBERON:0004819!8.33e-11!17;UBERON:0006553!8.33e-11!17;UBERON:0003074!8.33e-11!17;UBERON:0003060!8.33e-11!17;UBERON:0000080!4.21e-10!18;UBERON:0002120!4.21e-10!18;UBERON:0004875!4.21e-10!18;UBERON:0005721!4.21e-10!18;UBERON:0005754!4.21e-10!18;UBERON:0007297!4.21e-10!18;UBERON:0001851!4.04e-09!16;UBERON:0001225!4.74e-09!13;UBERON:0008987!4.74e-09!13;UBERON:0006853!5.52e-09!3;UBERON:0007685!5.52e-09!3;UBERON:0004134!5.52e-09!3;UBERON:0004876!6.59e-09!20;UBERON:0003887!2.14e-08!21;UBERON:0001781!3.39e-08!3;UBERON:0001782!3.39e-08!3;UBERON:0005424!3.39e-08!3;UBERON:0002113!1.10e-07!27;UBERON:0003918!1.10e-07!27;UBERON:0005095!1.10e-07!27;UBERON:0007687!1.10e-07!27;UBERON:0000489!2.24e-07!32;UBERON:0003064!4.53e-07!37;UBERON:0005256!6.31e-07!143;UBERON:0003914!7.59e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0006853;1.77e-15;3!UBERON:0007685;1.77e-15;3!UBERON:0004134;1.77e-15;3!UBERON:0001282;8.84e-13;1!UBERON:0009842;8.84e-13;1!UBERON:0003704;8.84e-13;1!UBERON:0001171;8.84e-13;1!UBERON:0001172;8.84e-13;1!UBERON:0004211;2.16e-10;10!UBERON:0009773;2.16e-10;10!UBERON:0001231;2.16e-10;10!UBERON:0004810;2.16e-10;10!UBERON:0002113;1.71e-07;24!UBERON:0011143;1.71e-07;24!UBERON:0002294;2.29e-07;7!UBERON:0001173;2.29e-07;7!UBERON:0000353;3.36e-07;15!UBERON:0006555;4.24e-07;15!UBERON:0004819;4.24e-07;15!UBERON:0001285;4.24e-07;15!UBERON:0007684;4.24e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006853,2.56e-15,3;UBERON:0007685,2.56e-15,3;UBERON:0004134,2.56e-15,3;UBERON:0001282,8.85e-13,1;UBERON:0009842,8.85e-13,1;UBERON:0003704,8.85e-13,1;UBERON:0001171,8.85e-13,1;UBERON:0001172,8.85e-13,1;UBERON:0004810,2.24e-10,10;UBERON:0000353,3.74e-07,15;UBERON:0004211,4.34e-07,15;UBERON:0009773,4.34e-07,15;UBERON:0001231,4.34e-07,15;UBERON:0001285,4.34e-07,15;UBERON:0007684,4.34e-07,15;UBERON:0004208,4.34e-07,15;UBERON:0005172,6.06e-07,54;UBERON:0005173,6.06e-07,54;UBERON:0002113,6.68e-07,26;UBERON:0003918,6.68e-07,26;UBERON:0011143,6.68e-07,26;UBERON:0005095,6.68e-07,26;UBERON:0007687,6.68e-07,26 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0.975865597581014,0.123121058076788,0,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.99972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0,0,1.46139224653261,0.105551628892876,0,0,0.431831832204279,0,0.270946437543853,0.501689773854853,1.01950509218015,0.831076008928724,1.11937377361089,0,0,0.256450125116389,0.656029291399411,0.325378394664303,0,1.09883357782012,0.495056999523528,0,0,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,1.32687795048244,0.438450885253763,0,0,0.405820753925408,0,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333926115068718,0,0.211125408127993,0,0,0,0,0,0,0.269605053441981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,10.3687270820771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.522355239482415,0,0,0,0,0,0,0,0,3.15196426687527,1.39100228192093,0,0,2.72539988855215,0,0.39961921916426,0,0,0,0,0,0,0.407712618220842,0.732219924186332,0.407992870545287,1.44475294950759,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.1568514874692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0.318593534327405,0,0,0,0.265841714557995,0,0.300515217994437,0,0,0.181848659202559,0.214821114084977,0,0.398095888698616,0,0,0,0,0,0.214441591374926,0,0.226705925512272,3.70435958918134,8.3210479532199,0,0,0.219284049578707,3.88716121080938,0.771656153083659,0,0,0,0,0,0,0,0,0.327609848846413,0,0.211312123358627,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,0,0,4.23580644277392,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,1.07963795609311,0,0,0,0,0,0,0,0,0,0,0.236664001461131,0.255640214277473,0,0,1.24082554265728,12.4220062067066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0.33639558774184,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0.201273793591026,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0.975865597581014,0.123121058076788,0,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.99972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0,0,1.46139224653261,0.105551628892876,0,0,0.431831832204279,0,0.270946437543853,0.501689773854853,1.01950509218015,0.831076008928724,1.11937377361089,0,0,0.256450125116389,0.656029291399411,0.325378394664303,0,1.09883357782012,0.495056999523528,0,0,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,1.32687795048244,0.438450885253763,0,0,0.405820753925408,0,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333926115068718,0,0.211125408127993,0,0,0,0,0,0,0.269605053441981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,10.3687270820771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.522355239482415,0,0,0,0,0,0,0,0,3.15196426687527,1.39100228192093,0,0,2.72539988855215,0,0.39961921916426,0,0,0,0,0,0,0.407712618220842,0.732219924186332,0.407992870545287,1.44475294950759,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.1568514874692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0.318593534327405,0,0,0,0.265841714557995,0,0.300515217994437,0,0,0.181848659202559,0.214821114084977,0,0.398095888698616,0,0,0,0,0,0.214441591374926,0,0.226705925512272,3.70435958918134,8.3210479532199,0,0,0.219284049578707,3.88716121080938,0.771656153083659,0,0,0,0,0,0,0,0,0.327609848846413,0,0.211312123358627,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,0,0,4.23580644277392,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,1.07963795609311,0,0,0,0,0,0,0,0,0,0,0.236664001461131,0.255640214277473,0,0,1.24082554265728,12.4220062067066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0.33639558774184,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p6@TRPM2 | |short_description=p6@TRPM2 | ||
}} | }} |
Latest revision as of 18:57, 18 September 2015
Short description: | p6@TRPM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TRPM2_5end |
Coexpression cluster: | NA |
Association with transcript: | -350bp_to_AK301451_5end |
EntrezGene: | TRPM2 |
HGNC: | 12339 |
UniProt: | B4DWB3 |
Genome view: | ZENBU |
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CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.56e-15 | 3 |
kidney cortex tubule cell | 2.56e-15 | 3 |
epithelial cell of proximal tubule | 2.56e-15 | 3 |
kidney cell | 1.87e-10 | 17 |
kidney epithelial cell | 1.87e-10 | 17 |
kidney tubule cell | 2.24e-10 | 10 |
nephron tubule epithelial cell | 2.24e-10 | 10 |
epithelial cell of uterus | 2.17e-08 | 6 |
stromal cell of endometrium | 2.17e-08 | 6 |
epithelial cell of nephron | 4.34e-07 | 15 |
epithelial cell of gall bladder | 7.20e-07 | 2 |
bone matrix secreting cell | 8.52e-07 | 2 |
osteocyte | 8.52e-07 | 2 |
osteoclast | 8.52e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
renal cortex tubule | 2.56e-15 | 3 |
region of nephron tubule | 2.56e-15 | 3 |
proximal tubule | 2.56e-15 | 3 |
intralobular bile duct | 8.85e-13 | 1 |
acinus | 8.85e-13 | 1 |
intrahepatic bile duct | 8.85e-13 | 1 |
portal lobule | 8.85e-13 | 1 |
hepatic acinus | 8.85e-13 | 1 |
nephron tubule epithelium | 2.24e-10 | 10 |
parenchyma | 3.74e-07 | 15 |
nephron epithelium | 4.34e-07 | 15 |
renal tubule | 4.34e-07 | 15 |
nephron tubule | 4.34e-07 | 15 |
nephron | 4.34e-07 | 15 |
uriniferous tubule | 4.34e-07 | 15 |
nephrogenic mesenchyme | 4.34e-07 | 15 |
abdomen element | 6.06e-07 | 54 |
abdominal segment element | 6.06e-07 | 54 |
kidney | 6.68e-07 | 26 |
kidney mesenchyme | 6.68e-07 | 26 |
upper urinary tract | 6.68e-07 | 26 |
kidney rudiment | 6.68e-07 | 26 |
kidney field | 6.68e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 2.46e-12 | 1 |
skin benign neoplasm | 2.46e-12 | 1 |
integumentary system benign neoplasm | 2.46e-12 | 1 |
dermis tumor | 2.46e-12 | 1 |
cutaneous fibrous histiocytoma | 2.46e-12 | 1 |
female reproductive endometrioid cancer | 2.17e-08 | 6 |
giant cell tumor | 8.52e-07 | 2 |
bone giant cell tumor | 8.52e-07 | 2 |