FFCP PHASE1:Hg19::chr6:41604890..41604947,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:41604890..41604947,+
|short_description=p2@MDFI
|description=CAGE_peak_2_at_MDFI_5end
|association_with_transcript=0bp_to_uc003oqp.3_5end
|EntrezGene=4188...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4188 | |EntrezGene=4188 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6967 | |HGNC=6967 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc003oqp.3_5end | |||
|cluster_id=chr6:41604890..41604947,+ | |||
|description=CAGE_peak_2_at_MDFI_5end | |||
|id=chr6:41604890..41604947,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.12e-17!254;CL:0000115!1.01e-16!35;CL:0002139!6.58e-15!24;CL:0002078!4.16e-14!44;CL:0000071!2.21e-12!18;CL:0002546!2.21e-12!18;CL:0002321!2.91e-11!248;CL:0000220!3.43e-11!246;CL:0000076!1.94e-10!62;CL:0000213!4.73e-09!57;CL:0000215!4.73e-09!57;CL:0002368!2.44e-07!13;CL:1000413!4.48e-07!9;CL:1000449!7.01e-07!16;CL:0000035!7.86e-07!20 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.26e-18;24!CL:0000115;5.64e-18;36!CL:0000071;6.19e-15;18!CL:0002078;2.09e-12;45!CL:1000449;3.65e-09;15!CL:0002368;5.96e-09;13!CL:0000213;2.00e-08;58!CL:0000215;2.00e-08;58!CL:1000413;2.14e-08;9!CL:0002681;5.27e-08;12!CL:0002584;5.27e-08;12!CL:1000497;1.58e-07;17!CL:0002518;1.58e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.38e-21,36;CL:0000066,3.90e-20,253;CL:0002078,4.13e-19,45;CL:0002139,4.53e-18,24;CL:0000071,6.06e-15,18;CL:0002546,6.06e-15,18;CL:0002321,2.61e-13,250;CL:0000213,1.15e-12,58;CL:0000215,1.15e-12,58;CL:0000076,4.76e-10,63;CL:1000449,3.26e-09,15;CL:0002368,6.25e-09,13;CL:0000222,1.71e-08,121;CL:1000413,2.19e-08,9;CL:0002681,4.50e-08,12;CL:0002584,4.50e-08,12;CL:1000497,1.44e-07,17;CL:0002518,1.44e-07,17 | |||
|ontology_enrichment_development_v019=CL:0002546;6.19e-15;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!6.23e-21!312;UBERON:0000483!1.93e-19!309;UBERON:0004111!8.73e-15!241;UBERON:0000477!3.53e-14!286;UBERON:0000468!4.33e-14!659;UBERON:0000922!4.56e-14!612;UBERON:0002050!8.39e-13!605;UBERON:0005423!8.39e-13!605;UBERON:0000923!1.69e-12!604;UBERON:0005291!1.69e-12!604;UBERON:0006598!1.69e-12!604;UBERON:0002532!1.69e-12!604;UBERON:0001986!2.21e-12!18;UBERON:0004638!2.21e-12!18;UBERON:0004852!2.21e-12!18;UBERON:0000025!2.71e-12!194;UBERON:0000481!4.29e-12!347;UBERON:0000467!1.83e-11!625;UBERON:0000480!2.68e-11!626;UBERON:0000487!4.72e-11!22;UBERON:0000064!5.31e-11!219;UBERON:0003914!7.01e-10!118;UBERON:0006914!1.40e-08!25;UBERON:0000466!1.45e-08!126;UBERON:0002049!4.15e-08!79;UBERON:0007798!4.15e-08!79;UBERON:0000475!5.62e-08!365;UBERON:0000464!5.71e-08!104;UBERON:0001048!5.99e-08!168;UBERON:0003103!6.87e-08!69;UBERON:0004121!1.11e-07!169;UBERON:0000924!1.39e-07!173;UBERON:0006601!1.39e-07!173;UBERON:0003915!4.48e-07!9;UBERON:0004700!4.48e-07!9;UBERON:0001917!4.48e-07!9;UBERON:0006555!6.60e-07!17;UBERON:0005103!6.60e-07!17;UBERON:0000083!6.60e-07!17;UBERON:0009201!6.60e-07!17;UBERON:0004819!6.60e-07!17;UBERON:0006553!6.60e-07!17;UBERON:0003074!6.60e-07!17;UBERON:0003060!6.60e-07!17;UBERON:0004211!7.01e-07!16;UBERON:0001285!7.01e-07!16;UBERON:0007684!7.01e-07!16;UBERON:0003220!7.01e-07!16;UBERON:0004208!7.01e-07!16;UBERON:0002200!7.07e-07!11;UBERON:0006876!7.07e-07!11;UBERON:0000033!7.12e-07!123;UBERON:0000080!8.18e-07!18;UBERON:0002120!8.18e-07!18;UBERON:0004875!8.18e-07!18;UBERON:0005721!8.18e-07!18;UBERON:0005754!8.18e-07!18;UBERON:0007297!8.18e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;6.19e-15;18!UBERON:0001986;6.19e-15;18!UBERON:0004852;6.19e-15;18!UBERON:0000487;9.84e-14;22!UBERON:0000490;1.93e-11;33!UBERON:0006914;3.94e-11;25!UBERON:0006555;3.65e-09;15!UBERON:0004819;3.65e-09;15!UBERON:0001285;3.65e-09;15!UBERON:0007684;3.65e-09;15!UBERON:0000353;1.35e-08;15!UBERON:0003915;2.14e-08;9!UBERON:0004700;2.14e-08;9!UBERON:0001917;2.14e-08;9!UBERON:0006876;4.19e-08;11!UBERON:0001225;5.27e-08;12!UBERON:0008987;5.27e-08;12!UBERON:0001851;7.71e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,4.38e-16,309;UBERON:0004638,6.06e-15,18;UBERON:0001986,6.06e-15,18;UBERON:0004852,6.06e-15,18;UBERON:0000483,1.24e-14,306;UBERON:0000487,9.93e-14,22;UBERON:0002049,3.87e-11,78;UBERON:0007798,3.87e-11,78;UBERON:0006914,3.97e-11,25;UBERON:0003914,5.64e-11,117;UBERON:0004111,3.09e-09,240;UBERON:0004211,3.26e-09,15;UBERON:0009773,3.26e-09,15;UBERON:0001231,3.26e-09,15;UBERON:0001285,3.26e-09,15;UBERON:0007684,3.26e-09,15;UBERON:0004208,3.26e-09,15;UBERON:0004535,9.72e-09,109;UBERON:0000353,1.15e-08,15;UBERON:0001009,1.85e-08,112;UBERON:0000025,2.06e-08,192;UBERON:0003915,2.19e-08,9;UBERON:0004700,2.19e-08,9;UBERON:0001917,2.19e-08,9;UBERON:0006555,2.46e-08,16;UBERON:0004819,2.46e-08,16;UBERON:0000922,3.25e-08,592;UBERON:0006876,3.84e-08,11;UBERON:0001225,4.50e-08,12;UBERON:0008987,4.50e-08,12;UBERON:0005423,5.57e-08,581;UBERON:0001048,1.42e-07,160;UBERON:0005631,1.57e-07,14;UBERON:0000158,1.57e-07,14;UBERON:0004872,1.89e-07,83;UBERON:0003103,5.12e-07,68;UBERON:0001851,6.73e-07,15;UBERON:0002050,7.60e-07,564 | |||
|phase1_expression=0,0,0.281908808191942,0,0.446961094427288,0,0,0,0,10.3208253330634,34.1922572306489,52.8628120555017,41.1476486036388,1.8564952944007,2.65117900582333,0,0.602694528023977,0,0.975865597581014,64.6385554903136,96.2883262672874,52.3469384868407,4.86601178122796,4.24310717725941,4.77062030460251,0,0,0,0,0,0.154816123316076,51.4875885708199,54.5182712988633,9.98335827450327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,14.0847180537764,7.1603034632377,0,0,0.434539556882471,17.4962908351242,57.9095495660137,1.60709189178915,8.20398770611487,10.7158438545614,1.0478326039817,12.750335090239,14.8313777113772,0,0,0,0,0,0,8.74554592413502,11.1830497363796,14.2327605659114,13.5673906061762,18.4579751932359,34.1146372005684,22.7804513525124,3.35941786920128,2.49036383880697,2.00832367658802,18.5301485870208,21.2876189601184,15.1318475679865,14.7065232138347,48.6085168729056,9.46577119811245,9.43023365029913,6.75668882899933,22.9974956198825,23.7316414892032,18.5033761369711,0,0,8.28578699070815,0,0,0,0,0,2.24271040056923,16.0123493594557,3.45334567784024,1.24484414159907,6.19669091520565,9.15386657435369,104.436625075003,126.7587033856,0.937285727335186,0,3.4228309292667,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0,10.0954643012419,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,65.7086900755209,40.6391719680344,36.7109882097925,0.243947412259191,0.265059536642971,1.16193942869518,1.0366105501537,1.51392510525377,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,16.9775754563669,23.8411015465858,6.5851841813024,19.1111324801205,0,0,0.590789906681404,0,0,4.46076306776166,24.4743136461235,22.4803506515239,12.0634766893957,8.05519472879207,1.62904152655162,0,8.6598805215164,0.811512834825538,5.51820862908362,17.1796072835678,19.4453915282177,18.8351610712252,0,0,0,0,0,58.1149770718017,24.1894264606358,39.6970272278682,11.3739323832617,17.1474023723238,57.1240191956165,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,118.074031815665,58.8546092924928,83.7523224075249,0.775630294546667,3.57656445851882,0,0,0,5.91576960802927,1.41849132023278,2.66422179016099,1.71573592389777,1.62786481617433,4.11620168390384,0,3.19852753868291,4.75171123760058,0,0.871533458600294,1.19967589418468,0,0,0,0.239624855491583,0,0,0,0,0.179060963239896,0,0,0,0,0.508189248444927,1.30139853857622,0.773288812777695,1.34013012267479,0,0,0,0,0.49076596687656,6.5022167737758,8.68048075839154,0.415941723061614,0,0,0,0.902838299183157,27.2889004867182,5.17365356462525,3.32112799267718,3.50301420229236,0,59.9151541835986,54.2166609621152,0,0,0,43.0441151453688,79.8890109650386,56.5469848526502,0,0,0.841980283299221,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0.116210378459959,0,28.6724252533697,0.920809889358963,0,0,0,3.15839729035188,1.46329140498388,4.70609861506113,7.30696123266303,1.26661954671451,21.6093429734704,8.16449785327275,8.85255256018771,38.5568131725723,5.96082162596476,6.52196706011309,3.82314409567557,4.98645605357235,3.1342465661105,0,0,2.56450125116389,16.0727176392856,8.13445986660758,0.9273691048295,11.0799052430196,15.1817479853882,20.099293829866,10.4009639365843,0,6.28359668898793,2.92692372517824,4.91211759123615,1.10269257987624,0.537101224341368,3.48040065394148,1.78975917573812,9.08126763596721,11.9005139059904,25.369088892194,9.82617886208298,4.046311234222,0,0,0,3.38836938193698,1.06461206063404,0,0,0,33.1220948730104,1.2655176988749,7.62520775695299,0.511795582622668,0,0,0,0.719489830333259,2.19629623788844,1.88499843753098,0.202182481573316,0,0,2.43816869544795,0,1.05650146756755,0,0,0,0,0,0,0,0,0,0.6196469961995,0,1.57752487424457,2.06322986127554,0,0,0,0,4.55367808518858,28.6946470600886,14.5295390215523,22.7902773682168,38.1118447014629,1.31801321087491,11.6236450621232,6.73885902670502,10.6423236848802,10.5672764095201,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75809815126273,0,0,0,7.1623345421307,6.23625829748541,3.99308912729002,1.9882952955326,0.703347082052564,0,0,0,1.19548792950642,1.10513566212459,0,7.97695723516807,0,0,2.06697207638852,0.716084698702437,0,0.690503839458535,0,0,0,0.371072392647405,0,0,0,0,5.57587896598948,3.30529745380596,4.49136595359079,0,0,0,0,0.361789315876224,0,0.331737779793674,0,0.87754158861589,0,1.25481369850743,3.15496059865568,0.113942055847001,0,2.96200226552248,0,7.33702667383415,9.34295452698996,3.73124343213044,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.530745387020035,1.22206028986725,0,0,0,0.471807930864739,3.21031058919516,0,0,1.36965233252463,0,1.18375320854817,2.41981432097328,1.22429104652196,15.543898588608,0,0,0,0.330991955875499,0.313932918407225,0,0,0,0.867798691675654,4.01768829398948,4.78825636192214,0.873633341210151,0.343972064943233,0,0,0,0.775912131907355,0,1.35588444468319,4.11125773940253,0.19871461170299,0.1899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| ||
|short_description=p2@MDFI | |||
}} | }} |
Latest revision as of 18:46, 18 September 2015
Short description: | p2@MDFI |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MDFI_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc003oqp.3_5end |
EntrezGene: | MDFI |
HGNC: | 6967 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.38e-21 | 36 |
epithelial cell | 3.90e-20 | 253 |
meso-epithelial cell | 4.13e-19 | 45 |
endothelial cell of vascular tree | 4.53e-18 | 24 |
blood vessel endothelial cell | 6.06e-15 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.06e-15 | 18 |
embryonic cell | 2.61e-13 | 250 |
lining cell | 1.15e-12 | 58 |
barrier cell | 1.15e-12 | 58 |
squamous epithelial cell | 4.76e-10 | 63 |
epithelial cell of nephron | 3.26e-09 | 15 |
respiratory epithelial cell | 6.25e-09 | 13 |
mesodermal cell | 1.71e-08 | 121 |
endothelial cell of artery | 2.19e-08 | 9 |
kidney cortical cell | 4.50e-08 | 12 |
renal cortical epithelial cell | 4.50e-08 | 12 |
kidney cell | 1.44e-07 | 17 |
kidney epithelial cell | 1.44e-07 | 17 |