FFCP PHASE1:Hg19::chr11:61717845..61717856,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7439 | |EntrezGene=7439 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12703 | |HGNC=12703 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=3bp_to_ENST00000449131_5end | |association_with_transcript=3bp_to_ENST00000449131_5end | ||
|cluster_id=chr11:61717845..61717856,+ | |||
|coexpression_cluster_id=C41 | |||
|description=CAGE_peak_6_at_BEST1_5end | |description=CAGE_peak_6_at_BEST1_5end | ||
|id=chr11:61717845..61717856,+ | |id=chr11:61717845..61717856,+ | ||
|ontology_enrichment_celltype=CL:0000147!1.58e-17!14;CL:0000149!1.57e-13!4;CL:0000148!2.16e-11!10;CL:0000541!2.16e-11!10;CL:0002586!1.59e-10!3 | |ontology_enrichment_celltype=CL:0000147!1.58e-17!14;CL:0000149!1.57e-13!4;CL:0000148!2.16e-11!10;CL:0000541!2.16e-11!10;CL:0002586!1.59e-10!3 | ||
|ontology_enrichment_celltype_v019=CL:0000147;1.05e-17;14!CL:0000148;5.12e-13;10!CL:0000149;1.27e-12;4!CL:0002567;3.67e-08;3!CL:0002586;3.67e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000147,1.10e-17,14;CL:0000148,5.82e-13,10;CL:0000541,5.82e-13,10;CL:0000149,1.13e-12,4;CL:0002586,3.31e-08,3;CL:0002567,3.55e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.33e-16;3!UBERON:0003057;1.33e-16;3!UBERON:0006601;2.62e-16;82!UBERON:0003056;2.04e-08;3!UBERON:0005425;6.77e-07;1 | |||
|ontology_enrichment_disease=DOID:1909!4.60e-08!2 | |ontology_enrichment_disease=DOID:1909!4.60e-08!2 | ||
|ontology_enrichment_disease_v019=DOID:1909;7.92e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,5.45e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!4.25e-82!57;UBERON:0005068!4.25e-82!57;UBERON:0006241!4.25e-82!57;UBERON:0007135!4.25e-82!57;UBERON:0005743!5.28e-69!86;UBERON:0003075!1.15e-66!86;UBERON:0007284!1.15e-66!86;UBERON:0002616!1.81e-66!59;UBERON:0000073!1.02e-64!94;UBERON:0001016!1.02e-64!94;UBERON:0002346!3.14e-63!90;UBERON:0002780!9.24e-60!41;UBERON:0001890!9.24e-60!41;UBERON:0006240!9.24e-60!41;UBERON:0001017!2.60e-59!82;UBERON:0003080!3.52e-58!42;UBERON:0000955!7.44e-58!69;UBERON:0006238!7.44e-58!69;UBERON:0001893!7.94e-54!34;UBERON:0002020!9.99e-54!34;UBERON:0003528!9.99e-54!34;UBERON:0007023!5.15e-52!115;UBERON:0002791!4.37e-51!33;UBERON:0003056!1.87e-50!61;UBERON:0001869!5.47e-48!32;UBERON:0000033!2.25e-38!123;UBERON:0000153!4.14e-36!129;UBERON:0007811!4.14e-36!129;UBERON:0004121!5.93e-35!169;UBERON:0002619!4.33e-34!22;UBERON:0000924!6.94e-34!173;UBERON:0006601!6.94e-34!173;UBERON:0001950!2.70e-33!20;UBERON:0000956!1.18e-29!25;UBERON:0000203!1.18e-29!25;UBERON:0002308!3.04e-28!9;UBERON:0000125!3.04e-28!9;UBERON:0002420!1.12e-27!9;UBERON:0007245!1.12e-27!9;UBERON:0010009!1.12e-27!9;UBERON:0010011!1.12e-27!9;UBERON:0000454!1.12e-27!9;UBERON:0003076!6.49e-24!15;UBERON:0003057!6.49e-24!15;UBERON:0009663!2.14e-22!7;UBERON:0002298!1.22e-19!8;UBERON:0004732!1.70e-18!13;UBERON:0000200!7.27e-18!6;UBERON:0000025!4.45e-17!194;UBERON:0004733!9.81e-16!12;UBERON:0002028!9.81e-16!12;UBERON:0007277!9.81e-16!12;UBERON:0000369!2.53e-13!4;UBERON:0002435!2.53e-13!4;UBERON:0000204!2.53e-13!4;UBERON:0010082!2.53e-13!4;UBERON:0001871!3.94e-13!7;UBERON:0000483!2.62e-12!309;UBERON:0000119!4.41e-12!312;UBERON:0000064!4.94e-12!219;UBERON:0004111!7.89e-12!241;UBERON:0000966!4.89e-11!5;UBERON:0005388!4.89e-11!5;UBERON:0001802!4.89e-11!5;UBERON:0002240!6.18e-11!3;UBERON:0006331!8.57e-11!3;UBERON:0000988!1.39e-10!3;UBERON:0001896!1.59e-10!3;UBERON:0001781!1.59e-10!3;UBERON:0001782!1.59e-10!3;UBERON:0005290!1.59e-10!3;UBERON:0005424!1.59e-10!3;UBERON:0010096!1.59e-10!3;UBERON:0005383!1.69e-10!3;UBERON:0005382!1.69e-10!3;UBERON:0001872!3.45e-10!5;UBERON:0000349!5.22e-10!5;UBERON:0002771!1.29e-09!3;UBERON:0000475!2.41e-09!365;UBERON:0000477!3.70e-09!286;UBERON:0002680!1.78e-08!9;UBERON:0001895!1.78e-08!9;UBERON:0010092!1.78e-08!9;UBERON:0005162!5.09e-08!2;UBERON:0000122!5.09e-08!2;UBERON:0001897!6.44e-08!2;UBERON:0001894!1.35e-07!7;UBERON:0006222!1.35e-07!7;UBERON:0001875!1.46e-07!2;UBERON:0006514!1.46e-07!2;UBERON:0001873!1.51e-07!2;UBERON:0002148!1.51e-07!2;UBERON:0009662!1.51e-07!2;UBERON:0010122!1.51e-07!2;UBERON:0000062!2.33e-07!511;UBERON:0001870!4.19e-07!2;UBERON:0001876!5.54e-07!2 | |ontology_enrichment_uberon=UBERON:0001049!4.25e-82!57;UBERON:0005068!4.25e-82!57;UBERON:0006241!4.25e-82!57;UBERON:0007135!4.25e-82!57;UBERON:0005743!5.28e-69!86;UBERON:0003075!1.15e-66!86;UBERON:0007284!1.15e-66!86;UBERON:0002616!1.81e-66!59;UBERON:0000073!1.02e-64!94;UBERON:0001016!1.02e-64!94;UBERON:0002346!3.14e-63!90;UBERON:0002780!9.24e-60!41;UBERON:0001890!9.24e-60!41;UBERON:0006240!9.24e-60!41;UBERON:0001017!2.60e-59!82;UBERON:0003080!3.52e-58!42;UBERON:0000955!7.44e-58!69;UBERON:0006238!7.44e-58!69;UBERON:0001893!7.94e-54!34;UBERON:0002020!9.99e-54!34;UBERON:0003528!9.99e-54!34;UBERON:0007023!5.15e-52!115;UBERON:0002791!4.37e-51!33;UBERON:0003056!1.87e-50!61;UBERON:0001869!5.47e-48!32;UBERON:0000033!2.25e-38!123;UBERON:0000153!4.14e-36!129;UBERON:0007811!4.14e-36!129;UBERON:0004121!5.93e-35!169;UBERON:0002619!4.33e-34!22;UBERON:0000924!6.94e-34!173;UBERON:0006601!6.94e-34!173;UBERON:0001950!2.70e-33!20;UBERON:0000956!1.18e-29!25;UBERON:0000203!1.18e-29!25;UBERON:0002308!3.04e-28!9;UBERON:0000125!3.04e-28!9;UBERON:0002420!1.12e-27!9;UBERON:0007245!1.12e-27!9;UBERON:0010009!1.12e-27!9;UBERON:0010011!1.12e-27!9;UBERON:0000454!1.12e-27!9;UBERON:0003076!6.49e-24!15;UBERON:0003057!6.49e-24!15;UBERON:0009663!2.14e-22!7;UBERON:0002298!1.22e-19!8;UBERON:0004732!1.70e-18!13;UBERON:0000200!7.27e-18!6;UBERON:0000025!4.45e-17!194;UBERON:0004733!9.81e-16!12;UBERON:0002028!9.81e-16!12;UBERON:0007277!9.81e-16!12;UBERON:0000369!2.53e-13!4;UBERON:0002435!2.53e-13!4;UBERON:0000204!2.53e-13!4;UBERON:0010082!2.53e-13!4;UBERON:0001871!3.94e-13!7;UBERON:0000483!2.62e-12!309;UBERON:0000119!4.41e-12!312;UBERON:0000064!4.94e-12!219;UBERON:0004111!7.89e-12!241;UBERON:0000966!4.89e-11!5;UBERON:0005388!4.89e-11!5;UBERON:0001802!4.89e-11!5;UBERON:0002240!6.18e-11!3;UBERON:0006331!8.57e-11!3;UBERON:0000988!1.39e-10!3;UBERON:0001896!1.59e-10!3;UBERON:0001781!1.59e-10!3;UBERON:0001782!1.59e-10!3;UBERON:0005290!1.59e-10!3;UBERON:0005424!1.59e-10!3;UBERON:0010096!1.59e-10!3;UBERON:0005383!1.69e-10!3;UBERON:0005382!1.69e-10!3;UBERON:0001872!3.45e-10!5;UBERON:0000349!5.22e-10!5;UBERON:0002771!1.29e-09!3;UBERON:0000475!2.41e-09!365;UBERON:0000477!3.70e-09!286;UBERON:0002680!1.78e-08!9;UBERON:0001895!1.78e-08!9;UBERON:0010092!1.78e-08!9;UBERON:0005162!5.09e-08!2;UBERON:0000122!5.09e-08!2;UBERON:0001897!6.44e-08!2;UBERON:0001894!1.35e-07!7;UBERON:0006222!1.35e-07!7;UBERON:0001875!1.46e-07!2;UBERON:0006514!1.46e-07!2;UBERON:0001873!1.51e-07!2;UBERON:0002148!1.51e-07!2;UBERON:0009662!1.51e-07!2;UBERON:0010122!1.51e-07!2;UBERON:0000062!2.33e-07!511;UBERON:0001870!4.19e-07!2;UBERON:0001876!5.54e-07!2 | ||
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|short_description=p6@BEST1 | |short_description=p6@BEST1 | ||
}} | }} |
Latest revision as of 17:39, 18 September 2015
Short description: | p6@BEST1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_BEST1_5end |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | 3bp_to_ENST00000449131_5end |
EntrezGene: | BEST1 |
HGNC: | 12703 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pigment cell | 1.10e-17 | 14 |
melanocyte | 5.82e-13 | 10 |
melanoblast | 5.82e-13 | 10 |
visual pigment cell | 1.13e-12 | 4 |
retinal pigment epithelial cell | 3.31e-08 | 3 |
light melanocyte | 3.55e-08 | 3 |
Ontology term | p-value | n |
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