FFCP PHASE1:Hg19::chr3:47932759..47932803,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:47932759..47932803,- to FFCP PHASE1:Hg19::chr3:47932759..47932803,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4134 | |EntrezGene=4134 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6862 | |HGNC=6862 | ||
|TSSclassifier=strong | |||
|UniProt=B4DSQ1 | |UniProt=B4DSQ1 | ||
|association_with_transcript=0bp_to_ENST00000441748_5end | |||
|cluster_id=chr3:47932759..47932803,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_12_at_MAP4_5end | |||
|id=chr3:47932759..47932803,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;2.38e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.27e-09,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.11e-22;82!UBERON:0006241;2.48e-11;3!UBERON:0003057;2.48e-11;3!UBERON:0006215;1.80e-10;3!UBERON:0010122;1.84e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.40e-87!57;UBERON:0005068!7.40e-87!57;UBERON:0006241!7.40e-87!57;UBERON:0007135!7.40e-87!57;UBERON:0001017!3.43e-85!82;UBERON:0005743!2.44e-83!86;UBERON:0000073!1.09e-76!94;UBERON:0001016!1.09e-76!94;UBERON:0002616!2.84e-72!59;UBERON:0000955!3.99e-70!69;UBERON:0006238!3.99e-70!69;UBERON:0002780!2.07e-68!41;UBERON:0001890!2.07e-68!41;UBERON:0006240!2.07e-68!41;UBERON:0003080!1.60e-66!42;UBERON:0003075!1.72e-64!86;UBERON:0007284!1.72e-64!86;UBERON:0002346!6.70e-61!90;UBERON:0002020!3.22e-59!34;UBERON:0003528!3.22e-59!34;UBERON:0001893!4.50e-59!34;UBERON:0002791!4.05e-57!33;UBERON:0007023!4.10e-56!115;UBERON:0001869!4.82e-55!32;UBERON:0003056!4.20e-47!61;UBERON:0000956!4.36e-41!25;UBERON:0000203!4.36e-41!25;UBERON:0002619!5.17e-40!22;UBERON:0000153!7.32e-40!129;UBERON:0007811!7.32e-40!129;UBERON:0000033!2.25e-39!123;UBERON:0004121!2.92e-39!169;UBERON:0000924!6.19e-38!173;UBERON:0006601!6.19e-38!173;UBERON:0001950!5.03e-36!20;UBERON:0000025!2.26e-20!194;UBERON:0003076!2.26e-20!15;UBERON:0003057!2.26e-20!15;UBERON:0002308!2.09e-19!9;UBERON:0000125!2.09e-19!9;UBERON:0002420!5.53e-19!9;UBERON:0007245!5.53e-19!9;UBERON:0010009!5.53e-19!9;UBERON:0010011!5.53e-19!9;UBERON:0000454!5.53e-19!9;UBERON:0004732!2.84e-16!13;UBERON:0004111!1.25e-15!241;UBERON:0009663!3.15e-15!7;UBERON:0000477!1.22e-14!286;UBERON:0004733!1.89e-14!12;UBERON:0002028!1.89e-14!12;UBERON:0007277!1.89e-14!12;UBERON:0002298!6.49e-14!8;UBERON:0001871!1.21e-12!7;UBERON:0000200!1.28e-12!6;UBERON:0000349!2.13e-11!5;UBERON:0000483!4.05e-11!309;UBERON:0000064!4.85e-11!219;UBERON:0000119!7.36e-11!312;UBERON:0001872!1.19e-10!5;UBERON:0002021!1.38e-10!5;UBERON:0001894!1.55e-10!7;UBERON:0006222!1.55e-10!7;UBERON:0000369!1.80e-09!4;UBERON:0002435!1.80e-09!4;UBERON:0000204!1.80e-09!4;UBERON:0010082!1.80e-09!4;UBERON:0002680!9.02e-09!9;UBERON:0001895!9.02e-09!9;UBERON:0010092!9.02e-09!9;UBERON:0000475!1.46e-08!365;UBERON:0000922!2.22e-08!612;UBERON:0002050!3.41e-08!605;UBERON:0005423!3.41e-08!605;UBERON:0001896!4.67e-08!3;UBERON:0005290!4.67e-08!3;UBERON:0010096!4.67e-08!3;UBERON:0000062!4.79e-08!511;UBERON:0002240!5.33e-08!3;UBERON:0000988!5.45e-08!3;UBERON:0000923!1.03e-07!604;UBERON:0005291!1.03e-07!604;UBERON:0006598!1.03e-07!604;UBERON:0002532!1.03e-07!604;UBERON:0006331!1.31e-07!3;UBERON:0005383!1.89e-07!3;UBERON:0005382!1.89e-07!3;UBERON:0002771!4.29e-07!3;UBERON:0000467!9.65e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.70e-67;34!UBERON:0003528;3.36e-67;34!UBERON:0002020;3.36e-67;34!UBERON:0001869;1.19e-65;32!UBERON:0002791;1.32e-65;32!UBERON:0002780;1.23e-63;41!UBERON:0001890;1.23e-63;41!UBERON:0000073;4.05e-62;53!UBERON:0002616;4.05e-62;53!UBERON:0002619;1.04e-60;22!UBERON:0001950;1.52e-54;20!UBERON:0000956;5.14e-53;25!UBERON:0000203;5.14e-53;25!UBERON:0001017;2.48e-44;75!UBERON:0000955;8.34e-43;68!UBERON:0001016;1.01e-37;83!UBERON:0000125;9.90e-29;9!UBERON:0002308;9.90e-29;9!UBERON:0002420;6.02e-28;9!UBERON:0007245;6.02e-28;9!UBERON:0010009;6.02e-28;9!UBERON:0010011;6.02e-28;9!UBERON:0000454;6.02e-28;9!UBERON:0004732;1.02e-24;13!UBERON:0009663;2.71e-22;7!UBERON:0004733;6.51e-22;12!UBERON:0002028;6.51e-22;12!UBERON:0002298;4.07e-21;6!UBERON:0000200;2.01e-18;6!UBERON:0007023;1.74e-17;114!UBERON:0000349;1.76e-16;5!UBERON:0001871;5.40e-16;6!UBERON:0002021;2.21e-15;5!UBERON:0001872;2.46e-15;5!UBERON:0011216;6.56e-14;132!UBERON:0000369;1.47e-13;4!UBERON:0002435;1.47e-13;4!UBERON:0000204;1.47e-13;4!UBERON:0002680;3.51e-13;9!UBERON:0001895;3.51e-13;9!UBERON:0002784;6.89e-13;4!UBERON:0001896;1.96e-11;3!UBERON:0005290;1.96e-11;3!UBERON:0000988;2.03e-11;3!UBERON:0001894;2.36e-11;7!UBERON:0002240;2.48e-11;3!UBERON:0005174;2.48e-11;3!UBERON:0001137;2.48e-11;3!UBERON:0005383;1.61e-10;3!UBERON:0005382;1.61e-10;3!UBERON:0010314;6.35e-10;132!UBERON:0001870;7.51e-10;3!UBERON:0002148;3.72e-08;2!UBERON:0006331;3.72e-08;2!UBERON:0009662;3.72e-08;2!UBERON:0005162;5.98e-08;2!UBERON:0000122;5.98e-08;2!UBERON:0001875;8.35e-08;2!UBERON:0006514;8.35e-08;2!UBERON:0001954;8.93e-08;2!UBERON:0003022;8.93e-08;2!UBERON:0002421;8.93e-08;2!UBERON:0002600;8.93e-08;2!UBERON:0001897;1.54e-07;2!UBERON:0010225;1.54e-07;2!UBERON:0001873;1.84e-07;2!UBERON:0001876;2.38e-07;2!UBERON:0002771;2.62e-07;2!UBERON:0001905;5.09e-07;2!UBERON:0002702;5.09e-07;2!UBERON:0002757;5.09e-07;2!UBERON:0010134;5.09e-07;2!UBERON:0005408;5.09e-07;2!UBERON:0001899;5.09e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,9.44e-122,56;UBERON:0005068,9.44e-122,56;UBERON:0006241,9.44e-122,56;UBERON:0007135,9.44e-122,56;UBERON:0001017,1.13e-115,81;UBERON:0000073,9.46e-112,53;UBERON:0002616,9.46e-112,53;UBERON:0001016,3.21e-107,89;UBERON:0000955,3.54e-96,68;UBERON:0006238,3.54e-96,68;UBERON:0002780,6.89e-90,41;UBERON:0001890,6.89e-90,41;UBERON:0003080,6.89e-90,41;UBERON:0006240,6.89e-90,41;UBERON:0003075,2.79e-87,82;UBERON:0007284,2.79e-87,82;UBERON:0002346,1.02e-82,86;UBERON:0003528,2.67e-80,34;UBERON:0002020,2.67e-80,34;UBERON:0001893,4.33e-80,34;UBERON:0001869,5.37e-74,32;UBERON:0002791,7.95e-74,32;UBERON:0010371,1.73e-66,104;UBERON:0003056,5.93e-65,61;UBERON:0002619,1.10e-60,22;UBERON:0007023,6.00e-58,114;UBERON:0001950,1.46e-54,20;UBERON:0000956,5.38e-53,25;UBERON:0000203,5.38e-53,25;UBERON:0004121,9.46e-53,171;UBERON:0000924,9.46e-53,171;UBERON:0006601,9.46e-53,171;UBERON:0010314,2.26e-52,132;UBERON:0011216,3.38e-39,223;UBERON:0003076,5.77e-31,15;UBERON:0003057,5.77e-31,15;UBERON:0000125,8.05e-29,9;UBERON:0002308,8.05e-29,9;UBERON:0002420,3.56e-28,9;UBERON:0007245,3.56e-28,9;UBERON:0010009,3.56e-28,9;UBERON:0010011,3.56e-28,9;UBERON:0000454,3.56e-28,9;UBERON:0000025,1.03e-27,192;UBERON:0004732,1.18e-24,13;UBERON:0009663,2.00e-22,7;UBERON:0004733,7.55e-22,12;UBERON:0002028,7.55e-22,12;UBERON:0007277,7.55e-22,12;UBERON:0002298,4.08e-21,6;UBERON:0004111,6.94e-20,240;UBERON:0000200,1.96e-18,6;UBERON:0000349,1.43e-16,5;UBERON:0001871,4.80e-16,6;UBERON:0001872,1.99e-15,5;UBERON:0002021,2.47e-15,5;UBERON:0000483,6.70e-15,306;UBERON:0000119,1.21e-14,309;UBERON:0000369,1.25e-13,4;UBERON:0002435,1.25e-13,4;UBERON:0000204,1.25e-13,4;UBERON:0010082,1.25e-13,4;UBERON:0002680,4.25e-13,9;UBERON:0001895,4.25e-13,9;UBERON:0010092,4.25e-13,9;UBERON:0002784,7.70e-13,4;UBERON:0001896,1.77e-11,3;UBERON:0005290,1.77e-11,3;UBERON:0010096,1.77e-11,3;UBERON:0002240,2.17e-11,3;UBERON:0005174,2.17e-11,3;UBERON:0001137,2.17e-11,3;UBERON:0000988,2.25e-11,3;UBERON:0001894,2.79e-11,7;UBERON:0006222,2.79e-11,7;UBERON:0005383,1.49e-10,3;UBERON:0005382,1.49e-10,3;UBERON:0001870,8.78e-10,3;UBERON:0002050,5.51e-09,564;UBERON:0000922,1.50e-08,592;UBERON:0000923,1.68e-08,560;UBERON:0010316,1.68e-08,560;UBERON:0005291,1.68e-08,560;UBERON:0006598,1.68e-08,560;UBERON:0010317,1.68e-08,560;UBERON:0002532,1.68e-08,560;UBERON:0005423,2.49e-08,581;UBERON:0002148,4.12e-08,2;UBERON:0006331,4.12e-08,2;UBERON:0009662,4.12e-08,2;UBERON:0005162,5.98e-08,2;UBERON:0000122,5.98e-08,2;UBERON:0001875,7.82e-08,2;UBERON:0006514,7.82e-08,2;UBERON:0001954,9.87e-08,2;UBERON:0003022,9.87e-08,2;UBERON:0002421,9.87e-08,2;UBERON:0002600,9.87e-08,2;UBERON:0001897,1.37e-07,2;UBERON:0010225,1.37e-07,2;UBERON:0001873,1.67e-07,2;UBERON:0010122,1.67e-07,2;UBERON:0001876,1.90e-07,2;UBERON:0002771,2.71e-07,2;UBERON:0002702,5.95e-07,2;UBERON:0001905,6.33e-07,2;UBERON:0002757,6.33e-07,2;UBERON:0010134,6.33e-07,2;UBERON:0005408,6.33e-07,2;UBERON:0001899,6.33e-07,2 | |||
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| ||
|short_description=p12@MAP4 | |||
}} | }} |
Latest revision as of 13:11, 18 September 2015
Short description: | p12@MAP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_MAP4_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000441748_5end |
EntrezGene: | MAP4 |
HGNC: | 6862 |
UniProt: | B4DSQ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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neuronal stem cell | 2.27e-09 | 8 |