FFCP PHASE1:Hg19::chr21:42219044..42219059,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1826 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3039 | |||
|TSSclassifier=strong | |||
|UniProt=O60469 | |||
|association_with_transcript=5bp_to_,-5bp_to_ENST00000400454,NM_001389,uc002yyq.1,uc002yyr.1_5end | |||
|cluster_id=chr21:42219044..42219059,- | |||
|coexpression_cluster_id=C1260 | |||
|description=CAGE_peak_4_at_DSCAM_5end | |||
|id=chr21:42219044..42219059,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.57e-19;82!UBERON:0006241;1.78e-09;3!UBERON:0003057;1.78e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.11e-59!57;UBERON:0005068!2.11e-59!57;UBERON:0006241!2.11e-59!57;UBERON:0007135!2.11e-59!57;UBERON:0000073!1.06e-54!94;UBERON:0001016!1.06e-54!94;UBERON:0001017!1.72e-54!82;UBERON:0005743!3.30e-53!86;UBERON:0002780!3.03e-49!41;UBERON:0001890!3.03e-49!41;UBERON:0006240!3.03e-49!41;UBERON:0002616!5.42e-49!59;UBERON:0003080!8.41e-48!42;UBERON:0002346!1.30e-47!90;UBERON:0000955!2.09e-45!69;UBERON:0006238!2.09e-45!69;UBERON:0003075!1.81e-44!86;UBERON:0007284!1.81e-44!86;UBERON:0001893!4.50e-39!34;UBERON:0002020!7.69e-39!34;UBERON:0003528!7.69e-39!34;UBERON:0000924!1.15e-38!173;UBERON:0006601!1.15e-38!173;UBERON:0002791!2.33e-37!33;UBERON:0003056!1.56e-36!61;UBERON:0004121!5.85e-36!169;UBERON:0001869!7.00e-36!32;UBERON:0002619!1.25e-32!22;UBERON:0000153!3.14e-31!129;UBERON:0007811!3.14e-31!129;UBERON:0000033!5.33e-31!123;UBERON:0007023!1.23e-30!115;UBERON:0001950!1.07e-29!20;UBERON:0000956!5.07e-28!25;UBERON:0000203!5.07e-28!25;UBERON:0003076!1.63e-12!15;UBERON:0003057!1.63e-12!15;UBERON:0000064!2.97e-12!219;UBERON:0002308!3.60e-12!9;UBERON:0000125!3.60e-12!9;UBERON:0000200!1.11e-11!6;UBERON:0001894!1.58e-11!7;UBERON:0006222!1.58e-11!7;UBERON:0002021!4.90e-10!5;UBERON:0004732!5.32e-10!13;UBERON:0001872!6.53e-10!5;UBERON:0000025!9.41e-10!194;UBERON:0000483!1.26e-09!309;UBERON:0002420!1.84e-09!9;UBERON:0007245!1.84e-09!9;UBERON:0010009!1.84e-09!9;UBERON:0010011!1.84e-09!9;UBERON:0000454!1.84e-09!9;UBERON:0000119!2.30e-09!312;UBERON:0009663!4.10e-09!7;UBERON:0004733!1.41e-08!12;UBERON:0002028!1.41e-08!12;UBERON:0007277!1.41e-08!12;UBERON:0001871!1.67e-08!7;UBERON:0000475!1.97e-08!365;UBERON:0004111!3.65e-08!241;UBERON:0002298!4.41e-08!8;UBERON:0000369!1.21e-07!4;UBERON:0002435!1.21e-07!4;UBERON:0000204!1.21e-07!4;UBERON:0010082!1.21e-07!4;UBERON:0003296!3.45e-07!4;UBERON:0010133!3.45e-07!4;UBERON:0002680!9.67e-07!9;UBERON:0001895!9.67e-07!9;UBERON:0010092!9.67e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;5.00e-53;22!UBERON:0001950;9.22e-53;20!UBERON:0001893;2.12e-52;34!UBERON:0002780;1.36e-51;41!UBERON:0001890;1.36e-51;41!UBERON:0003528;2.72e-50;34!UBERON:0002020;2.72e-50;34!UBERON:0001869;1.51e-49;32!UBERON:0002791;2.28e-49;32!UBERON:0000073;4.69e-47;53!UBERON:0002616;4.69e-47;53!UBERON:0000956;2.93e-46;25!UBERON:0000203;2.93e-46;25!UBERON:0001017;2.32e-30;75!UBERON:0000955;5.10e-28;68!UBERON:0001016;5.97e-27;83!UBERON:0000200;1.56e-19;6!UBERON:0002021;1.20e-16;5!UBERON:0001872;1.88e-16;5!UBERON:0000125;2.40e-16;9!UBERON:0002308;2.40e-16;9!UBERON:0004732;3.85e-14;13!UBERON:0002298;4.20e-13;6!UBERON:0002420;2.31e-12;9!UBERON:0007245;2.31e-12;9!UBERON:0010009;2.31e-12;9!UBERON:0010011;2.31e-12;9!UBERON:0000454;2.31e-12;9!UBERON:0011216;2.34e-12;132!UBERON:0007023;2.67e-12;114!UBERON:0001871;7.22e-12;6!UBERON:0004733;1.03e-11;12!UBERON:0002028;1.03e-11;12!UBERON:0009663;4.02e-11;7!UBERON:0001870;1.15e-10;3!UBERON:0001894;1.49e-10;7!UBERON:0000988;3.14e-10;3!UBERON:0002240;1.78e-09;3!UBERON:0005174;1.78e-09;3!UBERON:0001137;1.78e-09;3!UBERON:0002680;2.44e-08;9!UBERON:0001895;2.44e-08;9!UBERON:0005162;8.38e-08;2!UBERON:0000122;8.38e-08;2!UBERON:0000369;1.19e-07;4!UBERON:0002435;1.19e-07;4!UBERON:0000204;1.19e-07;4!UBERON:0002771;1.22e-07;2!UBERON:0002702;1.78e-07;2!UBERON:0002784;2.52e-07;4!UBERON:0002148;2.57e-07;2!UBERON:0006331;2.57e-07;2!UBERON:0009662;2.57e-07;2!UBERON:0003296;3.26e-07;4!UBERON:0010133;3.26e-07;4!UBERON:0010314;5.35e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.95e-89,56;UBERON:0005068,2.95e-89,56;UBERON:0006241,2.95e-89,56;UBERON:0007135,2.95e-89,56;UBERON:0001016,1.14e-82,89;UBERON:0001017,1.66e-81,81;UBERON:0000073,2.49e-81,53;UBERON:0002616,2.49e-81,53;UBERON:0002780,3.78e-71,41;UBERON:0001890,3.78e-71,41;UBERON:0003080,3.78e-71,41;UBERON:0006240,3.78e-71,41;UBERON:0000955,2.20e-67,68;UBERON:0006238,2.20e-67,68;UBERON:0002346,4.72e-64,86;UBERON:0001893,6.56e-62,34;UBERON:0003528,1.64e-61,34;UBERON:0002020,1.64e-61,34;UBERON:0003075,4.13e-61,82;UBERON:0007284,4.13e-61,82;UBERON:0001869,2.73e-56,32;UBERON:0002791,5.12e-56,32;UBERON:0010371,2.58e-53,104;UBERON:0002619,5.34e-53,22;UBERON:0001950,9.32e-53,20;UBERON:0003056,1.31e-48,61;UBERON:0004121,2.79e-47,171;UBERON:0000924,2.79e-47,171;UBERON:0006601,2.79e-47,171;UBERON:0000956,3.10e-46,25;UBERON:0000203,3.10e-46,25;UBERON:0007023,6.17e-39,114;UBERON:0010314,6.23e-36,132;UBERON:0011216,7.75e-32,223;UBERON:0000200,1.23e-19,6;UBERON:0000025,8.26e-19,192;UBERON:0003076,1.44e-18,15;UBERON:0003057,1.44e-18,15;UBERON:0002021,1.07e-16,5;UBERON:0001872,1.79e-16,5;UBERON:0000125,2.35e-16,9;UBERON:0002308,2.35e-16,9;UBERON:0004732,3.07e-14,13;UBERON:0004111,6.45e-14,240;UBERON:0002298,3.52e-13,6;UBERON:0002420,2.20e-12,9;UBERON:0007245,2.20e-12,9;UBERON:0010009,2.20e-12,9;UBERON:0010011,2.20e-12,9;UBERON:0000454,2.20e-12,9;UBERON:0004733,7.85e-12,12;UBERON:0002028,7.85e-12,12;UBERON:0007277,7.85e-12,12;UBERON:0001871,8.66e-12,6;UBERON:0000483,1.31e-11,306;UBERON:0000119,2.17e-11,309;UBERON:0009663,3.73e-11,7;UBERON:0001870,1.08e-10,3;UBERON:0001894,1.75e-10,7;UBERON:0006222,1.75e-10,7;UBERON:0000988,3.20e-10,3;UBERON:0002240,1.42e-09,3;UBERON:0005174,1.42e-09,3;UBERON:0001137,1.42e-09,3;UBERON:0000923,3.55e-09,560;UBERON:0010316,3.55e-09,560;UBERON:0005291,3.55e-09,560;UBERON:0006598,3.55e-09,560;UBERON:0010317,3.55e-09,560;UBERON:0002532,3.55e-09,560;UBERON:0002050,5.15e-09,564;UBERON:0002680,2.13e-08,9;UBERON:0001895,2.13e-08,9;UBERON:0010092,2.13e-08,9;UBERON:0005423,2.37e-08,581;UBERON:0000922,6.08e-08,592;UBERON:0005162,1.13e-07,2;UBERON:0000122,1.13e-07,2;UBERON:0000369,1.13e-07,4;UBERON:0002435,1.13e-07,4;UBERON:0000204,1.13e-07,4;UBERON:0010082,1.13e-07,4;UBERON:0002771,1.46e-07,2;UBERON:0002702,1.72e-07,2;UBERON:0002148,2.78e-07,2;UBERON:0006331,2.78e-07,2;UBERON:0009662,2.78e-07,2;UBERON:0002784,3.38e-07,4;UBERON:0003296,4.03e-07,4;UBERON:0010133,4.03e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.261958150995425,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538168907066586,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0.773043412653187,0.272746120590835,2.00763216772303,0,0,0,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301586917234893,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0.16798212819886,0,0.447792613514241,0.290633938513962,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60279707715243,4.63973287666617,1.67516265334349,6.37938751653163,0,0,0,0,0,0,0.415941723061614,0.892144943985809,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.276242966807689,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.495854746082934,0,1.14851441245126,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.33012373847307,0,0,0,0,0,1.76352923497993,0,0,0,0,0,0,0,0,0,2.90799823828566,3.06134723934109,0,0,0,0,0,0,0,0,0,0,0.885741385813839,2.65312164975897,1.52581736317083,1.87984741883082,0.886642856860642,1.31631238292384,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,1.22206028986725,0.296521128680622,0,0,4.17887024480198,0,1.40558667435203,0,0,0,0,0,2.44858209304392,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.91386879584153,0.90392296312213,0,0.397429223405979,5.76128243198496,0,0,0,0,0,0,0.343189995723929,0,0.124252535565433,0,0,0,0,0,0,3.42263447229983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,3.26888174667781,0,0,0,0,0,6.62170167572469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32709321450791,3.57028024705263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65820453990096,3.17268288745104,4.38168257472749,0,1.77486482458964,4.40884460883822,0,0,0,0,0,1.40500471742064,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,4.28601152070365,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,1.02315497042921,0,5.03251013938868,0.109209638192014,0,9.99102124477909,0.123935764259002,0,0,0,0,0,0,3.98221195598049,4.25089728976755,4.46974805360024,2.87162909937057,4.78936222821264,4.35690690524573,2.90656162137332,4.28308260777463,0,0,0,0,0,0,0,0,0,0,0,0,0,4.86270609252441,1.56215619722769,4.13373593002368,3.48786956066487,8.20462213527329,0,0,1.40696995487696,0,1.07140367175657,1.00885116665647,0.606965604236632,2.95960848756687,0.0887023701626388,0,0,3.60239584777208,4.99873079077653,0,0,0,2.35673384874003,0,4.56579360254748,0,0,0.500335809236594,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0.22589216407792,0.109940516745429,0,0,0.218559560503957,0,0,0,1.96308467114945,2.0793248022896,1.6906229103336,0,0.281951753939561,0.773494655682926,0,0,1.76447435857846,0,0,0,2.86679166302903,0,5.0993617643186,2.18175345170189,0,0,0,0,0,0,0.126698501011437,0,0,0.0918948995348449,0,0,0,0.829169439458779,3.82702084689012,0.213233981900981,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0.244209805832924,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@DSCAM | |||
}} |
Latest revision as of 12:06, 18 September 2015
Short description: | p4@DSCAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_DSCAM_5end |
Coexpression cluster: | C1260_neuroectodermal_parietal_occipital_insula_amygdala_extraskeletal_frontal |
Association with transcript: | 5bp_to_, -5bp_to_ENST00000400454, NM_001389, uc002yyq.1, uc002yyr.1_5end |
EntrezGene: | DSCAM |
HGNC: | 3039 |
UniProt: | O60469 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data