FFCP PHASE1:Hg19::chr10:52645379..52645393,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29974 | |EntrezGene=29974 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24086 | |HGNC=24086 | ||
|TSSclassifier=strong | |||
|UniProt=F8W9F8 | |UniProt=F8W9F8 | ||
|association_with_transcript=0bp_to_ENST00000395489_5end | |association_with_transcript=0bp_to_ENST00000395489_5end | ||
|cluster_id=chr10:52645379..52645393,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_A1CF_5end | |description=CAGE_peak_1_at_A1CF_5end | ||
|id=chr10:52645379..52645393,- | |id=chr10:52645379..52645393,- | ||
|ontology_enrichment_celltype=CL:0000181!1.90e-21!12;CL:0000417!1.90e-21!12;CL:0000668!1.90e-21!12;CL:0000414!1.90e-21!12;CL:0000412!1.90e-21!12;CL:0000182!1.90e-21!12;CL:0002322!2.82e-07!5 | |ontology_enrichment_celltype=CL:0000181!1.90e-21!12;CL:0000417!1.90e-21!12;CL:0000668!1.90e-21!12;CL:0000414!1.90e-21!12;CL:0000412!1.90e-21!12;CL:0000182!1.90e-21!12;CL:0002322!2.82e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000182;3.15e-31;12!CL:0002563;7.64e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.15e-31,12;CL:0000223,1.89e-10,58;CL:0002563,7.64e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;9.97e-34;11!UBERON:0009497;2.29e-28;13!UBERON:0003104;1.13e-20;31!UBERON:0001041;1.09e-11;30!UBERON:0006242;6.02e-07;1!CL:0000223;6.19e-07;58!UBERON:0001045;6.97e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.52e-20!19;UBERON:0006925!1.52e-20!19;UBERON:0008836!1.52e-20!19;UBERON:0009854!5.34e-20!23;UBERON:0005409!1.09e-18!35;UBERON:0000160!2.66e-18!27;UBERON:0009497!3.15e-18!25;UBERON:0000015!3.15e-18!25;UBERON:0002423!3.15e-18!25;UBERON:0006235!3.15e-18!25;UBERON:0004161!3.15e-18!25;UBERON:0004921!1.04e-17!129;UBERON:0004185!1.04e-17!129;UBERON:0008835!1.87e-17!22;UBERON:0003894!1.87e-17!22;UBERON:0009856!2.06e-17!26;UBERON:0005057!2.27e-17!26;UBERON:0000059!5.68e-17!11;UBERON:0005172!2.37e-15!55;UBERON:0005173!2.37e-15!55;UBERON:0007499!4.14e-15!25;UBERON:0001007!6.99e-15!155;UBERON:0001555!6.99e-15!155;UBERON:0007026!6.99e-15!155;UBERON:0002417!1.81e-13!61;UBERON:0000916!1.81e-13!61;UBERON:0004119!4.34e-13!169;UBERON:0000925!4.34e-13!169;UBERON:0006595!4.34e-13!169;UBERON:0004907!1.01e-12!5;UBERON:0003929!5.38e-12!54;UBERON:0002365!8.74e-12!31;UBERON:0002330!8.74e-12!31;UBERON:0001155!3.39e-11!9;UBERON:0005177!2.68e-10!107;UBERON:0002368!3.32e-10!35;UBERON:0000077!1.12e-09!130;UBERON:0001052!2.25e-09!4;UBERON:0000949!4.23e-09!45;UBERON:0009569!2.10e-08!113;UBERON:0005911!5.38e-08!82;UBERON:0001041!5.77e-07!98;UBERON:0000481!9.90e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.41e-30;19!UBERON:0006925;2.41e-30;19!UBERON:0002423;3.12e-27;25!UBERON:0000160;4.57e-25;17!UBERON:0005409;2.66e-19;22!UBERON:0002365;1.73e-17;31!UBERON:0002330;1.73e-17;31!UBERON:0001155;4.27e-16;9!UBERON:0002368;3.43e-15;33!UBERON:0000059;3.88e-13;11!UBERON:0004921;8.11e-12;33!UBERON:0002108;2.10e-11;4!UBERON:0001007;3.61e-11;81!UBERON:0000949;3.84e-11;43!UBERON:0005172;1.16e-10;52!UBERON:0005173;1.16e-10;52!UBERON:0002417;4.96e-08;58!UBERON:0000916;4.96e-08;58!UBERON:0001154;6.97e-07;1!UBERON:0001153;6.97e-07;1!UBERON:0009854;6.97e-07;1!UBERON:0001301;7.39e-07;1!UBERON:0001242;7.64e-07;4!UBERON:0001262;7.64e-07;4!UBERON:0004786;7.64e-07;4!UBERON:0004808;7.64e-07;4!UBERON:0001277;7.64e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.41e-30,19;UBERON:0006925,2.41e-30,19;UBERON:0008836,2.41e-30,19;UBERON:0009854,9.46e-30,23;UBERON:0009497,3.08e-27,25;UBERON:0000015,3.08e-27,25;UBERON:0002423,3.08e-27,25;UBERON:0006235,3.08e-27,25;UBERON:0004161,3.08e-27,25;UBERON:0009856,4.45e-26,26;UBERON:0008835,5.81e-26,22;UBERON:0003894,5.81e-26,22;UBERON:0000160,4.44e-25,17;UBERON:0007499,1.25e-22,25;UBERON:0003929,6.70e-19,54;UBERON:0005172,9.81e-19,54;UBERON:0005173,9.81e-19,54;UBERON:0002365,6.71e-18,31;UBERON:0002330,6.71e-18,31;UBERON:0004921,1.03e-17,118;UBERON:0005409,6.48e-17,25;UBERON:0002417,1.42e-16,60;UBERON:0000916,1.42e-16,60;UBERON:0001155,4.21e-16,9;UBERON:0002368,1.20e-15,35;UBERON:0001007,3.78e-15,145;UBERON:0001555,3.78e-15,145;UBERON:0007026,3.78e-15,145;UBERON:0000949,3.10e-14,45;UBERON:0004119,2.61e-13,160;UBERON:0000925,2.61e-13,160;UBERON:0006595,2.61e-13,160;UBERON:0005911,2.63e-13,82;UBERON:0000059,3.83e-13,11;UBERON:0005177,1.11e-11,101;UBERON:0002108,2.06e-11,4;UBERON:0002530,2.34e-10,59;UBERON:0011216,4.07e-09,223;UBERON:0009569,7.59e-09,112;UBERON:0003104,3.93e-07,160;UBERON:0009142,3.93e-07,160;UBERON:0001154,6.97e-07,1;UBERON:0001153,6.97e-07,1;UBERON:0001045,6.97e-07,1;UBERON:0001301,7.40e-07,1;UBERON:0001242,7.64e-07,4;UBERON:0001262,7.64e-07,4;UBERON:0004786,7.64e-07,4;UBERON:0004808,7.64e-07,4;UBERON:0001277,7.64e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40545596294053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,89.9960747234999,50.1241880505589,80.9382172153524,0,22.752861130476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.00984807631409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,100.671068379825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,108.171227092519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.041291884085,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21027132424918,71.5489003906144,0,0,0,0,0,0,0,0,0,3.87733098438087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.8420725005638,0,7.96209544862804,31.9331807857054,28.7184168118804,0,0,0,0,0,0,0,0,0,0,19.3585145677862,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,3.84215390530835,0,0,0,30.0291246258438,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0,0,5.82479747637269,32.773803839805,32.0597689102738,35.0498428041761,15.9452520053893,0,0,0,0,0,0,0,0,0,0,9.85071341239977,3.35709364063988,0,0,0,0,0,0,0,0,0,0,0,0,0,125.448712028439,43.727273341033,0,0,13.6869470307464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.59665412356402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280272163313789,0.913158720509496,0.863710364874486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487671699929078,0,0,0,0,0,0,0,0,0,0,68.9165231903946,23.3858729739234,0,0,0,0,0,0,0,0,0.45120521581504,0,0,0,0,0.730336388246517,0,0,0,0,0,11.6385904913388,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40545596294053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,89.9960747234999,50.1241880505589,80.9382172153524,0,22.752861130476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.00984807631409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,100.671068379825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,108.171227092519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.041291884085,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21027132424918,71.5489003906144,0,0,0,0,0,0,0,0,0,3.87733098438087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.8420725005638,0,7.96209544862804,31.9331807857054,28.7184168118804,0,0,0,0,0,0,0,0,0,0,19.3585145677862,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,3.84215390530835,0,0,0,30.0291246258438,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0,0,5.82479747637269,32.773803839805,32.0597689102738,35.0498428041761,15.9452520053893,0,0,0,0,0,0,0,0,0,0,9.85071341239977,3.35709364063988,0,0,0,0,0,0,0,0,0,0,0,0,0,125.448712028439,43.727273341033,0,0,13.6869470307464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.59665412356402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280272163313789,0.913158720509496,0.863710364874486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487671699929078,0,0,0,0,0,0,0,0,0,0,68.9165231903946,23.3858729739234,0,0,0,0,0,0,0,0,0.45120521581504,0,0,0,0,0.730336388246517,0,0,0,0,0,11.6385904913388,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@A1CF | |short_description=p1@A1CF | ||
}} | }} |
Latest revision as of 11:22, 18 September 2015
Short description: | p1@A1CF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_A1CF_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000395489_5end |
EntrezGene: | A1CF |
HGNC: | 24086 |
UniProt: | F8W9F8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.15e-31 | 12 |
endodermal cell | 1.89e-10 | 58 |
intestinal epithelial cell | 7.64e-07 | 4 |