FFCP PHASE1:Hg19::chr8:4852276..4852339,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64478 | |EntrezGene=64478 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14026 | |HGNC=14026 | ||
|TSSclassifier=strong | |||
|UniProt=F5GZ18,Q59FF8,Q96PZ7 | |UniProt=F5GZ18,Q59FF8,Q96PZ7 | ||
|association_with_transcript=0bp_to_NM_033225,uc011kwk.1_5end | |association_with_transcript=0bp_to_NM_033225,uc011kwk.1_5end | ||
|cluster_id=chr8:4852276..4852339,- | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_1_at_CSMD1_5end | |description=CAGE_peak_1_at_CSMD1_5end | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.97e-19;82!UBERON:0006215;1.40e-08;3!UBERON:0006241;3.96e-08;3!UBERON:0003057;3.96e-08;3!UBERON:0010122;1.00e-06;2 | |ontology_enrichment_development_v019=UBERON:0006601;6.97e-19;82!UBERON:0006215;1.40e-08;3!UBERON:0006241;3.96e-08;3!UBERON:0003057;3.96e-08;3!UBERON:0010122;1.00e-06;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.10e-65!57;UBERON:0005068!9.10e-65!57;UBERON:0006241!9.10e-65!57;UBERON:0007135!9.10e-65!57;UBERON:0001017!7.31e-59!82;UBERON:0005743!3.70e-57!86;UBERON:0007023!1.26e-56!115;UBERON:0002616!6.96e-54!59;UBERON:0002780!1.62e-52!41;UBERON:0001890!1.62e-52!41;UBERON:0006240!1.62e-52!41;UBERON:0000073!5.71e-52!94;UBERON:0001016!5.71e-52!94;UBERON:0001893!9.56e-52!34;UBERON:0002020!1.42e-51!34;UBERON:0003528!1.42e-51!34;UBERON:0003080!5.55e-51!42;UBERON:0000955!2.96e-50!69;UBERON:0006238!2.96e-50!69;UBERON:0002791!5.71e-50!33;UBERON:0002346!1.73e-49!90;UBERON:0001869!7.87e-49!32;UBERON:0003075!2.60e-46!86;UBERON:0007284!2.60e-46!86;UBERON:0002619!9.24e-40!22;UBERON:0000956!4.35e-37!25;UBERON:0000203!4.35e-37!25;UBERON:0001950!1.52e-36!20;UBERON:0003056!8.91e-35!61;UBERON:0000924!2.51e-30!173;UBERON:0006601!2.51e-30!173;UBERON:0004121!7.03e-28!169;UBERON:0000033!3.29e-27!123;UBERON:0000153!2.26e-26!129;UBERON:0007811!2.26e-26!129;UBERON:0002420!4.19e-16!9;UBERON:0007245!4.19e-16!9;UBERON:0010009!4.19e-16!9;UBERON:0010011!4.19e-16!9;UBERON:0000454!4.19e-16!9;UBERON:0002308!1.05e-15!9;UBERON:0000125!1.05e-15!9;UBERON:0000025!1.10e-15!194;UBERON:0001871!1.41e-14!7;UBERON:0003076!1.95e-14!15;UBERON:0003057!1.95e-14!15;UBERON:0009663!9.06e-13!7;UBERON:0004111!2.72e-12!241;UBERON:0004732!1.19e-11!13;UBERON:0000200!1.41e-11!6;UBERON:0004733!1.92e-10!12;UBERON:0002028!1.92e-10!12;UBERON:0007277!1.92e-10!12;UBERON:0000064!3.17e-10!219;UBERON:0001872!4.84e-10!5;UBERON:0002021!5.38e-10!5;UBERON:0002298!6.41e-10!8;UBERON:0000349!6.67e-10!5;UBERON:0000475!2.64e-09!365;UBERON:0000477!2.78e-09!286;UBERON:0000369!2.07e-08!4;UBERON:0002435!2.07e-08!4;UBERON:0000204!2.07e-08!4;UBERON:0010082!2.07e-08!4;UBERON:0000062!3.99e-08!511;UBERON:0000483!2.12e-07!309;UBERON:0000119!3.51e-07!312;UBERON:0000922!3.68e-07!612;UBERON:0000468!9.29e-07!659 | |ontology_enrichment_uberon=UBERON:0001049!9.10e-65!57;UBERON:0005068!9.10e-65!57;UBERON:0006241!9.10e-65!57;UBERON:0007135!9.10e-65!57;UBERON:0001017!7.31e-59!82;UBERON:0005743!3.70e-57!86;UBERON:0007023!1.26e-56!115;UBERON:0002616!6.96e-54!59;UBERON:0002780!1.62e-52!41;UBERON:0001890!1.62e-52!41;UBERON:0006240!1.62e-52!41;UBERON:0000073!5.71e-52!94;UBERON:0001016!5.71e-52!94;UBERON:0001893!9.56e-52!34;UBERON:0002020!1.42e-51!34;UBERON:0003528!1.42e-51!34;UBERON:0003080!5.55e-51!42;UBERON:0000955!2.96e-50!69;UBERON:0006238!2.96e-50!69;UBERON:0002791!5.71e-50!33;UBERON:0002346!1.73e-49!90;UBERON:0001869!7.87e-49!32;UBERON:0003075!2.60e-46!86;UBERON:0007284!2.60e-46!86;UBERON:0002619!9.24e-40!22;UBERON:0000956!4.35e-37!25;UBERON:0000203!4.35e-37!25;UBERON:0001950!1.52e-36!20;UBERON:0003056!8.91e-35!61;UBERON:0000924!2.51e-30!173;UBERON:0006601!2.51e-30!173;UBERON:0004121!7.03e-28!169;UBERON:0000033!3.29e-27!123;UBERON:0000153!2.26e-26!129;UBERON:0007811!2.26e-26!129;UBERON:0002420!4.19e-16!9;UBERON:0007245!4.19e-16!9;UBERON:0010009!4.19e-16!9;UBERON:0010011!4.19e-16!9;UBERON:0000454!4.19e-16!9;UBERON:0002308!1.05e-15!9;UBERON:0000125!1.05e-15!9;UBERON:0000025!1.10e-15!194;UBERON:0001871!1.41e-14!7;UBERON:0003076!1.95e-14!15;UBERON:0003057!1.95e-14!15;UBERON:0009663!9.06e-13!7;UBERON:0004111!2.72e-12!241;UBERON:0004732!1.19e-11!13;UBERON:0000200!1.41e-11!6;UBERON:0004733!1.92e-10!12;UBERON:0002028!1.92e-10!12;UBERON:0007277!1.92e-10!12;UBERON:0000064!3.17e-10!219;UBERON:0001872!4.84e-10!5;UBERON:0002021!5.38e-10!5;UBERON:0002298!6.41e-10!8;UBERON:0000349!6.67e-10!5;UBERON:0000475!2.64e-09!365;UBERON:0000477!2.78e-09!286;UBERON:0000369!2.07e-08!4;UBERON:0002435!2.07e-08!4;UBERON:0000204!2.07e-08!4;UBERON:0010082!2.07e-08!4;UBERON:0000062!3.99e-08!511;UBERON:0000483!2.12e-07!309;UBERON:0000119!3.51e-07!312;UBERON:0000922!3.68e-07!612;UBERON:0000468!9.29e-07!659 | ||
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|short_description=p1@CSMD1 | |short_description=p1@CSMD1 | ||
}} | }} |
Latest revision as of 09:35, 18 September 2015
Short description: | p1@CSMD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CSMD1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_NM_033225, uc011kwk.1_5end |
EntrezGene: | CSMD1 |
HGNC: | 14026 |
UniProt: | F5GZ18Q59FF8Q96PZ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data