FFCP PHASE1:Hg19::chr14:100070508..100070561,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=317762 | |EntrezGene=317762 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=35459 | |HGNC=35459 | ||
|TSSclassifier=strong | |||
|UniProt=A6NKD9 | |UniProt=A6NKD9 | ||
|association_with_transcript=-145bp_to_ENST00000380243_5end | |association_with_transcript=-145bp_to_ENST00000380243_5end | ||
|cluster_id=chr14:100070508..100070561,- | |||
|description=CAGE_peak_1_at_CCDC85C_5end | |description=CAGE_peak_1_at_CCDC85C_5end | ||
|id=chr14:100070508..100070561,- | |id=chr14:100070508..100070561,- | ||
|ontology_enrichment_celltype=CL:0000066!1.08e-42!254;CL:0000076!1.93e-15!62;CL:0002321!1.07e-14!248;CL:0000220!3.55e-14!246;CL:0000223!7.83e-11!59;CL:0000077!3.74e-08!19;CL:0002076!7.65e-08!43;CL:0000221!3.47e-07!71 | |ontology_enrichment_celltype=CL:0000066!1.08e-42!254;CL:0000076!1.93e-15!62;CL:0002321!1.07e-14!248;CL:0000220!3.55e-14!246;CL:0000223!7.83e-11!59;CL:0000077!3.74e-08!19;CL:0002076!7.65e-08!43;CL:0000221!3.47e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000077;4.05e-08;19!CL:0000076;1.91e-07;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.06e-43,253;CL:0000076,1.12e-14,63;CL:0002321,2.49e-14,250;CL:0000223,1.23e-11,58;CL:0002076,1.29e-08,42;CL:0000077,3.58e-08,19;CL:0000221,8.30e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000223;7.83e-07;58 | |||
|ontology_enrichment_disease=DOID:0050687!1.46e-19!143;DOID:305!9.41e-17!106;DOID:14566!3.54e-15!239;DOID:162!4.71e-15!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.65e-19,143;DOID:305,1.02e-16,106;DOID:14566,4.70e-15,239;DOID:162,6.26e-15,235 | |||
|ontology_enrichment_uberon=UBERON:0004111!3.79e-16!241;UBERON:0004119!4.15e-16!169;UBERON:0000925!4.15e-16!169;UBERON:0006595!4.15e-16!169;UBERON:0000477!4.45e-14!286;UBERON:0000481!2.12e-13!347;UBERON:0001007!5.77e-13!155;UBERON:0001555!5.77e-13!155;UBERON:0007026!5.77e-13!155;UBERON:0000483!1.70e-12!309;UBERON:0004921!1.78e-12!129;UBERON:0004185!1.78e-12!129;UBERON:0001048!6.18e-12!168;UBERON:0000119!8.10e-12!312;UBERON:0000025!8.91e-12!194;UBERON:0000077!1.37e-11!130;UBERON:0005911!1.94e-11!82;UBERON:0000064!4.41e-11!219;UBERON:0005177!3.74e-10!107;UBERON:0000924!7.54e-10!173;UBERON:0006601!7.54e-10!173;UBERON:0000466!8.01e-10!126;UBERON:0004121!8.36e-10!169;UBERON:0001008!6.39e-09!45;UBERON:0001041!1.27e-08!98;UBERON:0006554!1.77e-08!44;UBERON:0000475!1.92e-08!365;UBERON:0005172!2.13e-08!55;UBERON:0005173!2.13e-08!55;UBERON:0002530!3.75e-08!59;UBERON:0003064!6.19e-08!37;UBERON:0009569!6.85e-08!113;UBERON:0003929!9.27e-08!54;UBERON:0000062!1.67e-07!511;UBERON:0000063!2.02e-07!97;UBERON:0000058!5.08e-07!26;UBERON:0000073!8.16e-07!94;UBERON:0001016!8.16e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;1.02e-07;30!UBERON:0001008;1.02e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,1.16e-16,240;UBERON:0004119,6.12e-16,160;UBERON:0000925,6.12e-16,160;UBERON:0006595,6.12e-16,160;UBERON:0011216,1.12e-15,223;UBERON:0001007,3.74e-13,145;UBERON:0001555,3.74e-13,145;UBERON:0007026,3.74e-13,145;UBERON:0004921,5.18e-13,118;UBERON:0000025,2.08e-12,192;UBERON:0000483,6.28e-12,306;UBERON:0005177,1.62e-11,101;UBERON:0005911,1.81e-11,82;UBERON:0001048,2.18e-11,160;UBERON:0000119,2.89e-11,309;UBERON:0001008,8.08e-11,48;UBERON:0006554,2.37e-10,47;UBERON:0004121,2.34e-09,171;UBERON:0000924,2.34e-09,171;UBERON:0006601,2.34e-09,171;UBERON:0001041,4.09e-09,87;UBERON:0005172,6.43e-09,54;UBERON:0005173,6.43e-09,54;UBERON:0002530,3.58e-08,59;UBERON:0009569,4.03e-08,112;UBERON:0003929,8.89e-08,54;UBERON:0010371,1.93e-07,104;UBERON:0003914,8.94e-07,117 | |||
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| ||
|short_description=p1@CCDC85C | |short_description=p1@CCDC85C | ||
}} | }} |
Latest revision as of 08:54, 18 September 2015
Short description: | p1@CCDC85C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CCDC85C_5end |
Coexpression cluster: | NA |
Association with transcript: | -145bp_to_ENST00000380243_5end |
EntrezGene: | CCDC85C |
HGNC: | 35459 |
UniProt: | A6NKD9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.06e-43 | 253 |
squamous epithelial cell | 1.12e-14 | 63 |
embryonic cell | 2.49e-14 | 250 |
endodermal cell | 1.23e-11 | 58 |
endo-epithelial cell | 1.29e-08 | 42 |
mesothelial cell | 3.58e-08 | 19 |
ectodermal cell | 8.30e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 1.16e-16 | 240 |
endoderm-derived structure | 6.12e-16 | 160 |
endoderm | 6.12e-16 | 160 |
presumptive endoderm | 6.12e-16 | 160 |
organ system subdivision | 1.12e-15 | 223 |
digestive system | 3.74e-13 | 145 |
digestive tract | 3.74e-13 | 145 |
primitive gut | 3.74e-13 | 145 |
subdivision of digestive tract | 5.18e-13 | 118 |
tube | 2.08e-12 | 192 |
epithelium | 6.28e-12 | 306 |
trunk region element | 1.62e-11 | 101 |
endo-epithelium | 1.81e-11 | 82 |
primordium | 2.18e-11 | 160 |
cell layer | 2.89e-11 | 309 |
renal system | 8.08e-11 | 48 |
urinary system structure | 2.37e-10 | 47 |
ectoderm-derived structure | 2.34e-09 | 171 |
ectoderm | 2.34e-09 | 171 |
presumptive ectoderm | 2.34e-09 | 171 |
foregut | 4.09e-09 | 87 |
abdomen element | 6.43e-09 | 54 |
abdominal segment element | 6.43e-09 | 54 |
gland | 3.58e-08 | 59 |
subdivision of trunk | 4.03e-08 | 112 |
gut epithelium | 8.89e-08 | 54 |
ecto-epithelium | 1.93e-07 | 104 |
epithelial tube | 8.94e-07 | 117 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.65e-19 | 143 |
carcinoma | 1.02e-16 | 106 |
disease of cellular proliferation | 4.70e-15 | 239 |
cancer | 6.26e-15 | 235 |