FFCP PHASE1:Hg19::chr6:33399033..33399042,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8831 | |EntrezGene=8831 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11497 | |HGNC=11497 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-465bp_to_ENST00000428982_5end | |association_with_transcript=-465bp_to_ENST00000428982_5end | ||
|cluster_id=chr6:33399033..33399042,+ | |||
|description=CAGE_peak_6_at_SYNGAP1_5end | |description=CAGE_peak_6_at_SYNGAP1_5end | ||
|id=chr6:33399033..33399042,+ | |id=chr6:33399033..33399042,+ | ||
|ontology_enrichment_celltype=CL:0000047!1.25e-09!8;CL:0002322!1.36e-08!5;CL:0000542!2.18e-07!53;CL:0000051!2.18e-07!53;CL:0000540!5.36e-07!6;CL:0000031!5.36e-07!6;CL:0000404!5.36e-07!6;CL:0000838!9.50e-07!52 | |ontology_enrichment_celltype=CL:0000047!1.25e-09!8;CL:0002322!1.36e-08!5;CL:0000542!2.18e-07!53;CL:0000051!2.18e-07!53;CL:0000540!5.36e-07!6;CL:0000031!5.36e-07!6;CL:0000404!5.36e-07!6;CL:0000838!9.50e-07!52 | ||
|ontology_enrichment_celltype_v019=CL:0002322;5.15e-07;5 | |ontology_enrichment_celltype_v019=CL:0002322;5.15e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.32e-09,8;CL:0002322,6.18e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.39e-07;82 | |ontology_enrichment_development_v019=UBERON:0006601;2.39e-07;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p6@SYNGAP1 | |short_description=p6@SYNGAP1 | ||
}} | }} |
Latest revision as of 07:36, 18 September 2015
Short description: | p6@SYNGAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SYNGAP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -465bp_to_ENST00000428982_5end |
EntrezGene: | SYNGAP1 |
HGNC: | 11497 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.32e-09 | 8 |
embryonic stem cell | 6.18e-07 | 5 |