FFCP PHASE1:Hg19::chr17:79304150..79304190,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=284186 | |EntrezGene=284186 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26794 | |HGNC=26794 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N8V8 | |UniProt=Q8N8V8 | ||
|association_with_transcript=283bp_to_ENST00000332900,NM_178520,uc002kad.1_5end | |association_with_transcript=283bp_to_ENST00000332900,NM_178520,uc002kad.1_5end | ||
|cluster_id=chr17:79304150..79304190,- | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_1_at_TMEM105_5end | |description=CAGE_peak_1_at_TMEM105_5end | ||
|id=chr17:79304150..79304190,- | |id=chr17:79304150..79304190,- | ||
|ontology_enrichment_celltype=CL:0000066!4.41e-22!254;CL:0000223!3.85e-19!59;CL:0002076!7.82e-18!43;CL:0002251!7.20e-12!21;CL:0002368!9.26e-07!13 | |ontology_enrichment_celltype=CL:0000066!4.41e-22!254;CL:0000223!3.85e-19!59;CL:0002076!7.82e-18!43;CL:0002251!7.20e-12!21;CL:0002368!9.26e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0000349;6.12e-20;19!CL:0002577;3.42e-11;3!CL:0002541;5.38e-11;3!CL:0002076;2.82e-08;42!CL:0002536;1.32e-07;2!CL:0002537;3.84e-07;5!CL:0002251;6.25e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,7.71e-20,19;CL:0002577,3.43e-11,3;CL:0002541,6.71e-11,3;CL:0000223,5.42e-10,58;CL:0000066,8.44e-10,253;CL:0002076,1.14e-09,42;CL:0002536,1.51e-07,2;CL:0002537,3.96e-07,5;CL:0002251,7.57e-07,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.45e-15!106;DOID:0050687!1.02e-10!143;DOID:1749!1.12e-07!14;DOID:299!1.36e-07!25;DOID:162!4.47e-07!235 | |ontology_enrichment_disease=DOID:305!1.45e-15!106;DOID:0050687!1.02e-10!143;DOID:1749!1.12e-07!14;DOID:299!1.36e-07!25;DOID:162!4.47e-07!235 | ||
|ontology_enrichment_disease_v019=DOID:5093;2.07e-08;4!DOID:1612;2.07e-08;4!DOID:1749;1.74e-07;14!DOID:299;3.98e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.23e-09,106;DOID:5093,1.88e-08,4;DOID:1612,1.88e-08,4;DOID:1749,1.48e-07,14;DOID:299,4.29e-07,25;DOID:0050687,5.37e-07,143;DOID:162,6.78e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.74e-24!169;UBERON:0000925!3.74e-24!169;UBERON:0006595!3.74e-24!169;UBERON:0001007!5.35e-17!155;UBERON:0001555!5.35e-17!155;UBERON:0007026!5.35e-17!155;UBERON:0004921!2.09e-14!129;UBERON:0004185!2.09e-14!129;UBERON:0000077!6.82e-14!130;UBERON:0005631!4.36e-13!14;UBERON:0000158!4.36e-13!14;UBERON:0005911!9.37e-12!82;UBERON:0001004!6.64e-10!72;UBERON:0003124!1.26e-09!7;UBERON:0001041!1.41e-09!98;UBERON:0000161!1.01e-08!35;UBERON:0000344!1.60e-08!12;UBERON:0000466!2.61e-08!126;UBERON:0000166!3.80e-07!21;UBERON:0003729!5.54e-07!5;UBERON:0005153!5.74e-07!37;UBERON:0003929!7.49e-07!54 | |ontology_enrichment_uberon=UBERON:0004119!3.74e-24!169;UBERON:0000925!3.74e-24!169;UBERON:0006595!3.74e-24!169;UBERON:0001007!5.35e-17!155;UBERON:0001555!5.35e-17!155;UBERON:0007026!5.35e-17!155;UBERON:0004921!2.09e-14!129;UBERON:0004185!2.09e-14!129;UBERON:0000077!6.82e-14!130;UBERON:0005631!4.36e-13!14;UBERON:0000158!4.36e-13!14;UBERON:0005911!9.37e-12!82;UBERON:0001004!6.64e-10!72;UBERON:0003124!1.26e-09!7;UBERON:0001041!1.41e-09!98;UBERON:0000161!1.01e-08!35;UBERON:0000344!1.60e-08!12;UBERON:0000466!2.61e-08!126;UBERON:0000166!3.80e-07!21;UBERON:0003729!5.54e-07!5;UBERON:0005153!5.74e-07!37;UBERON:0003929!7.49e-07!54 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;3.60e-21;10!UBERON:0000158;3.60e-21;10!UBERON:0000478;2.97e-15;24!UBERON:0000305;1.91e-12;7!UBERON:0003124;5.38e-11;3!UBERON:0000920;5.38e-11;3!UBERON:0001987;1.74e-08;4!UBERON:0003343;1.28e-07;4!UBERON:0004785;1.28e-07;4!UBERON:0002294;2.12e-07;7!UBERON:0001173;2.12e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,7.62e-28,14;UBERON:0000158,7.62e-28,14;UBERON:0003124,2.40e-17,7;UBERON:0000478,3.55e-15,24;UBERON:0000305,2.18e-12,7;UBERON:0000920,6.71e-11,3;UBERON:0004871,8.67e-11,8;UBERON:0004119,4.11e-10,160;UBERON:0000925,4.11e-10,160;UBERON:0006595,4.11e-10,160;UBERON:0001987,1.75e-08,4;UBERON:0004340,1.75e-08,4;UBERON:0004923,6.88e-08,66;UBERON:0003343,1.72e-07,4;UBERON:0004785,1.72e-07,4 | |||
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| ||
|short_description=p1@TMEM105 | |short_description=p1@TMEM105 | ||
}} | }} |
Latest revision as of 06:13, 18 September 2015
Short description: | p1@TMEM105 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TMEM105_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | 283bp_to_ENST00000332900, NM_178520, uc002kad.1_5end |
EntrezGene: | TMEM105 |
HGNC: | 26794 |
UniProt: | Q8N8V8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 7.71e-20 | 19 |
placental epithelial cell | 3.43e-11 | 3 |
chorionic membrane mesenchymal stem cell | 6.71e-11 | 3 |
endodermal cell | 5.42e-10 | 58 |
epithelial cell | 8.44e-10 | 253 |
endo-epithelial cell | 1.14e-09 | 42 |
amniotic epithelial cell | 1.51e-07 | 2 |
amnion mesenchymal stem cell | 3.96e-07 | 5 |
epithelial cell of alimentary canal | 7.57e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 7.62e-28 | 14 |
membranous layer | 7.62e-28 | 14 |
chorion | 2.40e-17 | 7 |
extraembryonic structure | 3.55e-15 | 24 |
amnion | 2.18e-12 | 7 |
egg chorion | 6.71e-11 | 3 |
somatic layer of lateral plate mesoderm | 8.67e-11 | 8 |
endoderm-derived structure | 4.11e-10 | 160 |
endoderm | 4.11e-10 | 160 |
presumptive endoderm | 4.11e-10 | 160 |
placenta | 1.75e-08 | 4 |
allantois | 1.75e-08 | 4 |
organ component layer | 6.88e-08 | 66 |
mucosa of oral region | 1.72e-07 | 4 |
respiratory system mucosa | 1.72e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.23e-09 | 106 |
thoracic cancer | 1.88e-08 | 4 |
breast cancer | 1.88e-08 | 4 |
squamous cell carcinoma | 1.48e-07 | 14 |
adenocarcinoma | 4.29e-07 | 25 |
cell type cancer | 5.37e-07 | 143 |
cancer | 6.78e-07 | 235 |