FFCP PHASE1:Hg19::chr4:6202291..6202311,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=152789 | |EntrezGene=152789 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26460 | |HGNC=26460 | ||
|TSSclassifier=strong | |||
|UniProt=Q96N16,F8WCA9 | |UniProt=Q96N16,F8WCA9 | ||
|association_with_transcript=6bp_to_ENST00000282924,ENST00000418227,ENST00000425341,NM_001099433,NM_144720,uc003giv.3,uc010idb.1,uc010idc.1,uc010idd.1,uc010ide.2_5end | |association_with_transcript=6bp_to_ENST00000282924,ENST00000418227,ENST00000425341,NM_001099433,NM_144720,uc003giv.3,uc010idb.1,uc010idc.1,uc010idd.1,uc010ide.2_5end | ||
|cluster_id=chr4:6202291..6202311,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_2_at_JAKMIP1_5end | |description=CAGE_peak_2_at_JAKMIP1_5end | ||
|id=chr4:6202291..6202311,- | |id=chr4:6202291..6202311,- | ||
|ontology_enrichment_celltype=CL:0000084!5.99e-15!25;CL:0000827!5.99e-15!25;CL:0000838!3.86e-12!52;CL:0000791!7.31e-12!18;CL:0000789!7.31e-12!18;CL:0002420!7.31e-12!18;CL:0002419!7.31e-12!18;CL:0000790!7.31e-12!18;CL:0000542!9.86e-12!53;CL:0000051!9.86e-12!53;CL:0000625!1.46e-09!11 | |ontology_enrichment_celltype=CL:0000084!5.99e-15!25;CL:0000827!5.99e-15!25;CL:0000838!3.86e-12!52;CL:0000791!7.31e-12!18;CL:0000789!7.31e-12!18;CL:0002420!7.31e-12!18;CL:0002419!7.31e-12!18;CL:0000790!7.31e-12!18;CL:0000542!9.86e-12!53;CL:0000051!9.86e-12!53;CL:0000625!1.46e-09!11 | ||
|ontology_enrichment_celltype_v019=CL:0000084;5.60e-23;25!CL:0000791;3.26e-17;18!CL:0000789;3.26e-17;18!CL:0002419;3.26e-17;18!CL:0000625;2.85e-15;11!CL:0000542;1.38e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,3.66e-23,25;CL:0000827,3.66e-23,25;CL:0000838,1.31e-17,52;CL:0000791,2.29e-17,18;CL:0000789,2.29e-17,18;CL:0002420,2.29e-17,18;CL:0002419,2.29e-17,18;CL:0000790,2.29e-17,18;CL:0000542,3.86e-17,53;CL:0000051,3.86e-17,53;CL:0000625,2.44e-15,11 | |||
|ontology_enrichment_development_v019=CL:0000790;3.26e-17;18!UBERON:0006601;8.18e-10;82!CL:0000051;1.38e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.68e-42!82;UBERON:0005743!1.76e-41!86;UBERON:0001049!3.21e-40!57;UBERON:0005068!3.21e-40!57;UBERON:0006241!3.21e-40!57;UBERON:0007135!3.21e-40!57;UBERON:0000073!4.00e-40!94;UBERON:0001016!4.00e-40!94;UBERON:0002780!3.94e-36!41;UBERON:0001890!3.94e-36!41;UBERON:0006240!3.94e-36!41;UBERON:0007023!6.11e-36!115;UBERON:0003080!6.22e-35!42;UBERON:0000955!3.73e-34!69;UBERON:0006238!3.73e-34!69;UBERON:0002616!8.57e-33!59;UBERON:0001893!1.83e-30!34;UBERON:0002020!3.27e-30!34;UBERON:0003528!3.27e-30!34;UBERON:0002791!2.67e-29!33;UBERON:0001869!5.70e-29!32;UBERON:0002346!2.24e-28!90;UBERON:0003075!2.29e-28!86;UBERON:0007284!2.29e-28!86;UBERON:0003056!9.20e-26!61;UBERON:0002619!5.30e-25!22;UBERON:0001950!9.47e-23!20;UBERON:0000956!4.29e-21!25;UBERON:0000203!4.29e-21!25;UBERON:0000153!5.20e-17!129;UBERON:0007811!5.20e-17!129;UBERON:0000924!3.80e-16!173;UBERON:0006601!3.80e-16!173;UBERON:0004121!8.44e-16!169;UBERON:0000033!9.11e-16!123;UBERON:0002420!8.83e-11!9;UBERON:0007245!8.83e-11!9;UBERON:0010009!8.83e-11!9;UBERON:0010011!8.83e-11!9;UBERON:0000454!8.83e-11!9;UBERON:0002308!1.24e-10!9;UBERON:0000125!1.24e-10!9;UBERON:0009663!6.00e-09!7;UBERON:0000200!2.14e-08!6;UBERON:0000178!4.42e-08!15;UBERON:0000179!4.42e-08!15;UBERON:0000463!4.42e-08!15;UBERON:0001871!8.18e-08!7;UBERON:0001872!1.57e-07!5;UBERON:0002021!2.99e-07!5;UBERON:0003076!4.61e-07!15;UBERON:0003057!4.61e-07!15;UBERON:0001894!5.19e-07!7;UBERON:0006222!5.19e-07!7;UBERON:0000349!6.96e-07!5 | |ontology_enrichment_uberon=UBERON:0001017!8.68e-42!82;UBERON:0005743!1.76e-41!86;UBERON:0001049!3.21e-40!57;UBERON:0005068!3.21e-40!57;UBERON:0006241!3.21e-40!57;UBERON:0007135!3.21e-40!57;UBERON:0000073!4.00e-40!94;UBERON:0001016!4.00e-40!94;UBERON:0002780!3.94e-36!41;UBERON:0001890!3.94e-36!41;UBERON:0006240!3.94e-36!41;UBERON:0007023!6.11e-36!115;UBERON:0003080!6.22e-35!42;UBERON:0000955!3.73e-34!69;UBERON:0006238!3.73e-34!69;UBERON:0002616!8.57e-33!59;UBERON:0001893!1.83e-30!34;UBERON:0002020!3.27e-30!34;UBERON:0003528!3.27e-30!34;UBERON:0002791!2.67e-29!33;UBERON:0001869!5.70e-29!32;UBERON:0002346!2.24e-28!90;UBERON:0003075!2.29e-28!86;UBERON:0007284!2.29e-28!86;UBERON:0003056!9.20e-26!61;UBERON:0002619!5.30e-25!22;UBERON:0001950!9.47e-23!20;UBERON:0000956!4.29e-21!25;UBERON:0000203!4.29e-21!25;UBERON:0000153!5.20e-17!129;UBERON:0007811!5.20e-17!129;UBERON:0000924!3.80e-16!173;UBERON:0006601!3.80e-16!173;UBERON:0004121!8.44e-16!169;UBERON:0000033!9.11e-16!123;UBERON:0002420!8.83e-11!9;UBERON:0007245!8.83e-11!9;UBERON:0010009!8.83e-11!9;UBERON:0010011!8.83e-11!9;UBERON:0000454!8.83e-11!9;UBERON:0002308!1.24e-10!9;UBERON:0000125!1.24e-10!9;UBERON:0009663!6.00e-09!7;UBERON:0000200!2.14e-08!6;UBERON:0000178!4.42e-08!15;UBERON:0000179!4.42e-08!15;UBERON:0000463!4.42e-08!15;UBERON:0001871!8.18e-08!7;UBERON:0001872!1.57e-07!5;UBERON:0002021!2.99e-07!5;UBERON:0003076!4.61e-07!15;UBERON:0003057!4.61e-07!15;UBERON:0001894!5.19e-07!7;UBERON:0006222!5.19e-07!7;UBERON:0000349!6.96e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.89e-41;32!UBERON:0001893;9.04e-40;34!UBERON:0003528;2.44e-39;34!UBERON:0002020;2.44e-39;34!UBERON:0002791;1.79e-38;32!UBERON:0002619;3.58e-38;22!UBERON:0001950;2.32e-34;20!UBERON:0002780;4.88e-33;41!UBERON:0001890;4.88e-33;41!UBERON:0000956;5.67e-33;25!UBERON:0000203;5.67e-33;25!UBERON:0000073;4.33e-25;53!UBERON:0002616;4.33e-25;53!UBERON:0001017;7.97e-19;75!UBERON:0000955;9.06e-19;68!UBERON:0001016;3.38e-16;83!UBERON:0000125;3.73e-14;9!UBERON:0002308;3.73e-14;9!UBERON:0000200;4.64e-13;6!UBERON:0001872;1.66e-11;5!UBERON:0002420;2.27e-11;9!UBERON:0007245;2.27e-11;9!UBERON:0010009;2.27e-11;9!UBERON:0010011;2.27e-11;9!UBERON:0000454;2.27e-11;9!UBERON:0002021;3.05e-11;5!UBERON:0009663;3.72e-11;7!UBERON:0000369;9.29e-10;4!UBERON:0002435;9.29e-10;4!UBERON:0000204;9.29e-10;4!UBERON:0001871;6.40e-08;6!UBERON:0002298;9.02e-08;6!UBERON:0005383;1.04e-07;3!UBERON:0005382;1.04e-07;3!UBERON:0001870;1.92e-07;3!UBERON:0000349;2.00e-07;5!UBERON:0007023;6.45e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.31e-49,56;UBERON:0005068,5.31e-49,56;UBERON:0006241,5.31e-49,56;UBERON:0007135,5.31e-49,56;UBERON:0001016,3.38e-46,89;UBERON:0001869,3.83e-46,32;UBERON:0001017,4.63e-46,81;UBERON:0001893,5.99e-46,34;UBERON:0003528,1.53e-45,34;UBERON:0002020,1.53e-45,34;UBERON:0002780,3.50e-45,41;UBERON:0001890,3.50e-45,41;UBERON:0003080,3.50e-45,41;UBERON:0006240,3.50e-45,41;UBERON:0000073,1.50e-44,53;UBERON:0002616,1.50e-44,53;UBERON:0002791,1.41e-42,32;UBERON:0000955,1.07e-40,68;UBERON:0006238,1.07e-40,68;UBERON:0002619,4.09e-38,22;UBERON:0001950,2.47e-34,20;UBERON:0000956,6.36e-33,25;UBERON:0000203,6.36e-33,25;UBERON:0003075,1.50e-31,82;UBERON:0007284,1.50e-31,82;UBERON:0002346,1.61e-29,86;UBERON:0003056,2.82e-29,61;UBERON:0010371,1.28e-23,104;UBERON:0007023,1.36e-21,114;UBERON:0004121,2.72e-18,171;UBERON:0000924,2.72e-18,171;UBERON:0006601,2.72e-18,171;UBERON:0010314,2.90e-16,132;UBERON:0000125,6.80e-14,9;UBERON:0002308,6.80e-14,9;UBERON:0000200,4.81e-13,6;UBERON:0011216,5.05e-13,223;UBERON:0001872,1.36e-11,5;UBERON:0002420,2.85e-11,9;UBERON:0007245,2.85e-11,9;UBERON:0010009,2.85e-11,9;UBERON:0010011,2.85e-11,9;UBERON:0000454,2.85e-11,9;UBERON:0002021,3.98e-11,5;UBERON:0009663,4.90e-11,7;UBERON:0000369,9.73e-10,4;UBERON:0002435,9.73e-10,4;UBERON:0000204,9.73e-10,4;UBERON:0010082,9.73e-10,4;UBERON:0001871,6.61e-08,6;UBERON:0005383,1.07e-07,3;UBERON:0005382,1.07e-07,3;UBERON:0002298,1.16e-07,6;UBERON:0001870,1.82e-07,3;UBERON:0000349,2.11e-07,5;UBERON:0000025,4.10e-07,192 | |||
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| ||
|short_description=p2@JAKMIP1 | |short_description=p2@JAKMIP1 | ||
}} | }} |
Latest revision as of 04:16, 18 September 2015
Short description: | p2@JAKMIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_JAKMIP1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 6bp_to_ENST00000282924, ENST00000418227, ENST00000425341, NM_001099433, NM_144720, uc003giv.3, uc010idb.1, uc010idc.1, uc010idd.1, uc010ide.2_5end |
EntrezGene: | JAKMIP1 |
HGNC: | 26460 |
UniProt: | Q96N16F8WCA9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 3.66e-23 | 25 |
pro-T cell | 3.66e-23 | 25 |
lymphoid lineage restricted progenitor cell | 1.31e-17 | 52 |
mature alpha-beta T cell | 2.29e-17 | 18 |
alpha-beta T cell | 2.29e-17 | 18 |
immature T cell | 2.29e-17 | 18 |
mature T cell | 2.29e-17 | 18 |
immature alpha-beta T cell | 2.29e-17 | 18 |
lymphocyte | 3.86e-17 | 53 |
common lymphoid progenitor | 3.86e-17 | 53 |
CD8-positive, alpha-beta T cell | 2.44e-15 | 11 |