FFCP PHASE1:Hg19::chr3:3841142..3841153,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:3841142..3841153,+
|short_description=p3@LRRN1
|description=CAGE_peak_3_at_LRRN1_5end
|association_with_transcript=21bp_to_ENST00000319331,NM_020873,uc003b...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57633 | |EntrezGene=57633 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20980 | |HGNC=20980 | ||
|TSSclassifier=strong | |||
|UniProt=Q6UXK5 | |UniProt=Q6UXK5 | ||
|association_with_transcript=21bp_to_ENST00000319331,NM_020873,uc003bpt.3_5end | |||
|cluster_id=chr3:3841142..3841153,+ | |||
|coexpression_cluster_id=C163 | |||
|description=CAGE_peak_3_at_LRRN1_5end | |||
|id=chr3:3841142..3841153,+ | |||
|ontology_enrichment_celltype=CL:0002322!7.43e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002322;5.54e-12;5!CL:0000064;4.53e-09;3!CL:0000067;4.53e-09;3!CL:0005012;4.53e-09;3!CL:0002304;4.53e-09;3!CL:0002586;4.35e-08;3!CL:0000147;1.05e-07;14!CL:0000540;4.59e-07;6!CL:0000404;4.59e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.60e-12,5;CL:0000047,7.81e-11,8;CL:0000064,4.88e-09,3;CL:0000067,4.88e-09,3;CL:0005012,4.88e-09,3;CL:0002304,4.88e-09,3;CL:0002586,6.99e-08,3;CL:0000147,1.36e-07,14;CL:0000540,6.36e-07,6;CL:0000031,6.36e-07,6;CL:0000404,6.36e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.66e-07;3!CL:0000031;4.59e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004733;9.24e-22;12!UBERON:0002028;9.24e-22;12!UBERON:0007625;1.10e-21;11!UBERON:0004732;6.97e-20;13!UBERON:0002680;5.83e-16;9!UBERON:0001895;5.83e-16;9!UBERON:0000073;1.27e-14;53!UBERON:0002616;1.27e-14;53!UBERON:0002298;3.67e-14;6!UBERON:0000019;7.68e-14;19!UBERON:0000047;7.68e-14;19!UBERON:0004088;7.68e-14;19!UBERON:0010230;7.68e-14;19!UBERON:0000970;5.15e-13;20!UBERON:0002104;2.88e-12;21!UBERON:0001456;2.88e-12;21!UBERON:0001017;3.80e-12;75!UBERON:0000488;1.93e-11;4!UBERON:0000020;5.69e-11;23!UBERON:0000955;1.63e-10;68!UBERON:0001032;2.10e-10;24!UBERON:0004456;2.10e-10;24!UBERON:0001016;2.39e-10;83!UBERON:0003528;1.34e-09;34!UBERON:0002020;1.34e-09;34!UBERON:0002037;1.56e-09;6!UBERON:0002780;1.71e-09;41!UBERON:0001890;1.71e-09;41!UBERON:0001869;2.67e-09;32!UBERON:0001778;4.53e-09;3!UBERON:0001775;4.53e-09;3!UBERON:0000125;6.85e-09;9!UBERON:0002308;6.85e-09;9!UBERON:0002791;2.14e-08;32!UBERON:0000988;2.43e-08;3!UBERON:0001801;3.29e-08;14!UBERON:0001781;4.35e-08;3!UBERON:0001782;4.35e-08;3!UBERON:0000966;6.29e-08;5!UBERON:0005388;6.29e-08;5!UBERON:0001802;6.29e-08;5!UBERON:0001893;1.20e-07;34!UBERON:0002203;1.43e-07;6!UBERON:0001768;1.43e-07;6!UBERON:0002200;1.43e-07;6!UBERON:0001896;1.66e-07;3!UBERON:0005290;1.66e-07;3!UBERON:0010371;2.35e-07;31!UBERON:0000922;9.33e-07;49 | |||
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| ||
|short_description=p3@LRRN1 | |||
}} | }} |
Latest revision as of 03:19, 18 September 2015
Short description: | p3@LRRN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LRRN1_5end |
Coexpression cluster: | C163_Skeletal_skeletal_Pericytes_Hepatic_rhabdomyosarcoma_throat_mesenchymal |
Association with transcript: | 21bp_to_ENST00000319331, NM_020873, uc003bpt.3_5end |
EntrezGene: | LRRN1 |
HGNC: | 20980 |
UniProt: | Q6UXK5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.60e-12 | 5 |
neuronal stem cell | 7.81e-11 | 8 |
ciliated cell | 4.88e-09 | 3 |
ciliated epithelial cell | 4.88e-09 | 3 |
multi-ciliated epithelial cell | 4.88e-09 | 3 |
non-pigmented ciliary epithelial cell | 4.88e-09 | 3 |
retinal pigment epithelial cell | 6.99e-08 | 3 |
pigment cell | 1.36e-07 | 14 |
neuron | 6.36e-07 | 6 |
neuroblast | 6.36e-07 | 6 |
electrically signaling cell | 6.36e-07 | 6 |