FFCP PHASE1:Hg19::chr3:38029450..38029458,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=50853 | |EntrezGene=50853 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30906 | |HGNC=30906 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-71bp_to_uc003chj.2_5end | |association_with_transcript=-71bp_to_uc003chj.2_5end | ||
|cluster_id=chr3:38029450..38029458,+ | |||
|coexpression_cluster_id=C894 | |coexpression_cluster_id=C894 | ||
|description=CAGE_peak_12_at_VILL_5end | |description=CAGE_peak_12_at_VILL_5end | ||
|id=chr3:38029450..38029458,+ | |id=chr3:38029450..38029458,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002567;2.74e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,2.59e-12,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!6.76e-14!35;UBERON:0000160!2.09e-13!27;UBERON:0004921!6.88e-10!129;UBERON:0004185!6.88e-10!129;UBERON:0001007!1.81e-09!155;UBERON:0001555!1.81e-09!155;UBERON:0007026!1.81e-09!155;UBERON:0004119!1.59e-08!169;UBERON:0000925!1.59e-08!169;UBERON:0006595!1.59e-08!169;UBERON:0002108!5.19e-07!14 | |ontology_enrichment_uberon=UBERON:0005409!6.76e-14!35;UBERON:0000160!2.09e-13!27;UBERON:0004921!6.88e-10!129;UBERON:0004185!6.88e-10!129;UBERON:0001007!1.81e-09!155;UBERON:0001555!1.81e-09!155;UBERON:0007026!1.81e-09!155;UBERON:0004119!1.59e-08!169;UBERON:0000925!1.59e-08!169;UBERON:0006595!1.59e-08!169;UBERON:0002108!5.19e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;9.88e-30;17!UBERON:0002108;2.38e-27;4!UBERON:0005409;1.95e-23;22!UBERON:0001155;1.31e-15;9!UBERON:0004921;1.19e-13;33!UBERON:0000059;5.76e-13;11!UBERON:0002114;2.74e-12;2!UBERON:0001555;2.24e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.88e-30,17;UBERON:0002108,2.72e-27,4;UBERON:0005409,8.14e-21,25;UBERON:0001155,1.22e-15,9;UBERON:0000059,5.42e-13,11;UBERON:0002114,3.24e-12,2;UBERON:0004921,2.25e-07,118 | |||
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|short_description=p12@VILL | |short_description=p12@VILL | ||
}} | }} |
Latest revision as of 02:47, 18 September 2015
Short description: | p12@VILL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_VILL_5end |
Coexpression cluster: | C894_small_hepatoblastoma_colon_hepatocellular_liver_Intestinal_Prostate |
Association with transcript: | -71bp_to_uc003chj.2_5end |
EntrezGene: | VILL |
HGNC: | 30906 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 2.59e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 9.88e-30 | 17 |
small intestine | 2.72e-27 | 4 |
gastrointestinal system | 8.14e-21 | 25 |
colon | 1.22e-15 | 9 |
large intestine | 5.42e-13 | 11 |
duodenum | 3.24e-12 | 2 |
subdivision of digestive tract | 2.25e-07 | 118 |