FFCP PHASE1:Hg19::chr13:78109884..78109902,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:78109884..78109902,+ to FFCP PHASE1:Hg19::chr13:78109884..78109902,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8796 | |EntrezGene=8796 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10573 | |HGNC=10573 | ||
|TSSclassifier=strong | |||
|UniProt=O95171 | |UniProt=O95171 | ||
|association_with_transcript=0bp_to_ENST00000349847,ENST00000377246_5end | |||
|cluster_id=chr13:78109884..78109902,+ | |||
|coexpression_cluster_id=C629 | |||
|description=CAGE_peak_2_at_SCEL_5end | |||
|id=chr13:78109884..78109902,+ | |||
|ontology_enrichment_celltype=CL:0002076!1.44e-27!43;CL:0000066!2.77e-27!254;CL:0000223!4.49e-18!59;CL:0002251!3.49e-11!21;CL:0002368!1.05e-09!13;CL:0000082!1.50e-07!19;CL:0002149!2.18e-07!6;CL:0002255!2.18e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002076;2.11e-26;42!CL:0002251;1.09e-17;20!CL:0002368;1.02e-11;13!CL:0000349;1.55e-10;19!CL:0002149;1.60e-07;6!CL:0002255;1.60e-07;6!CL:0002577;7.48e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,6.48e-36,42;CL:0000066,7.08e-27,253;CL:0000223,4.37e-25,58;CL:0002251,1.09e-17,20;CL:0002368,9.73e-12,13;CL:0000349,1.62e-10,19;CL:0002149,1.44e-07,6;CL:0002255,1.44e-07,6;CL:0002577,7.48e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000223;6.02e-13;58 | |||
|ontology_enrichment_disease=DOID:305!2.74e-13!106;DOID:1749!9.40e-13!14;DOID:299!1.70e-08!25;DOID:0050687!7.07e-08!143;DOID:3001!2.18e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:1749;8.84e-16;14!DOID:3001;1.60e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,9.58e-16,14;DOID:305,2.90e-13,106;DOID:0050687,4.76e-08,143;DOID:3001,1.44e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.93e-20!169;UBERON:0000925!3.93e-20!169;UBERON:0006595!3.93e-20!169;UBERON:0001004!1.29e-17!72;UBERON:0001007!2.11e-14!155;UBERON:0001555!2.11e-14!155;UBERON:0007026!2.11e-14!155;UBERON:0000077!1.58e-13!130;UBERON:0000161!1.49e-12!35;UBERON:0000065!1.71e-12!53;UBERON:0005631!2.05e-12!14;UBERON:0000158!2.05e-12!14;UBERON:0005911!3.96e-12!82;UBERON:0000464!1.25e-11!104;UBERON:0000166!1.42e-11!21;UBERON:0005178!1.58e-11!34;UBERON:0002224!1.58e-11!34;UBERON:0000064!4.42e-11!219;UBERON:0005181!5.26e-11!35;UBERON:0004921!7.81e-11!129;UBERON:0004185!7.81e-11!129;UBERON:0005153!1.56e-10!37;UBERON:0002048!3.85e-10!22;UBERON:0000117!3.85e-10!22;UBERON:0000171!3.85e-10!22;UBERON:0000170!3.85e-10!22;UBERON:0005597!3.85e-10!22;UBERON:0000118!3.85e-10!22;UBERON:0005795!6.57e-10!22;UBERON:0000466!2.04e-09!126;UBERON:0000344!3.33e-09!12;UBERON:0003124!4.61e-09!7;UBERON:0000995!5.70e-09!21;UBERON:0005157!6.27e-09!51;UBERON:0004807!7.06e-09!28;UBERON:0001444!8.34e-09!48;UBERON:0000062!9.42e-09!511;UBERON:0000165!1.19e-08!28;UBERON:0000930!1.19e-08!28;UBERON:0003975!2.25e-08!22;UBERON:0001041!2.75e-08!98;UBERON:0000072!1.06e-07!46;UBERON:0004802!1.50e-07!19;UBERON:0000115!1.50e-07!19;UBERON:0008947!1.87e-07!38;UBERON:0003258!1.87e-07!38;UBERON:0003100!2.05e-07!41;UBERON:0005156!2.34e-07!59;UBERON:0000990!2.34e-07!59;UBERON:0003134!3.54e-07!37;UBERON:0000474!3.54e-07!37;UBERON:0004175!6.85e-07!25;UBERON:0000478!7.31e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0000344;2.59e-12;20!UBERON:0005631;9.13e-12;10!UBERON:0000158;9.13e-12;10!UBERON:0000478;7.61e-11;24!UBERON:0000974;2.58e-10;6!UBERON:0005178;1.49e-09;34!UBERON:0002224;1.49e-09;34!UBERON:0000165;1.73e-09;28!UBERON:0000161;4.28e-09;19!UBERON:0000166;4.28e-09;19!UBERON:0005181;9.14e-09;35!UBERON:0001004;2.36e-08;65!UBERON:0001987;4.36e-08;4!UBERON:0002048;1.71e-07;22!UBERON:0000117;1.71e-07;22!UBERON:0000171;1.71e-07;22!UBERON:0000170;1.71e-07;22!UBERON:0003729;1.83e-07;13!UBERON:0004807;1.89e-07;22!UBERON:0000305;1.94e-07;7!UBERON:0003350;2.10e-07;8!UBERON:0003343;2.56e-07;4!UBERON:0004785;2.56e-07;4!UBERON:0002294;3.39e-07;7!UBERON:0001173;3.39e-07;7!UBERON:0001723;3.85e-07;3!UBERON:0001033;3.85e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,5.32e-18,14;UBERON:0000158,5.32e-18,14;UBERON:0004119,9.83e-18,160;UBERON:0000925,9.83e-18,160;UBERON:0006595,9.83e-18,160;UBERON:0001004,6.81e-16,74;UBERON:0003124,1.35e-12,7;UBERON:0001007,2.19e-12,145;UBERON:0001555,2.19e-12,145;UBERON:0007026,2.19e-12,145;UBERON:0000344,2.57e-12,20;UBERON:0000161,7.05e-12,36;UBERON:0000065,1.02e-11,54;UBERON:0005795,1.48e-11,22;UBERON:0000166,3.21e-11,22;UBERON:0000478,7.75e-11,24;UBERON:0005178,7.94e-11,34;UBERON:0002224,7.94e-11,34;UBERON:0004923,8.14e-11,66;UBERON:0005181,2.16e-10,35;UBERON:0000995,2.88e-10,21;UBERON:0000153,3.59e-10,62;UBERON:0007811,3.59e-10,62;UBERON:0003975,1.15e-09,22;UBERON:0004921,1.21e-09,118;UBERON:0000033,1.24e-09,56;UBERON:0000165,4.84e-09,29;UBERON:0000930,4.84e-09,29;UBERON:0001041,9.04e-09,87;UBERON:0005911,1.40e-08,82;UBERON:0001444,2.18e-08,49;UBERON:0004175,3.73e-08,25;UBERON:0001987,4.16e-08,4;UBERON:0004340,4.16e-08,4;UBERON:0002048,1.69e-07,22;UBERON:0000117,1.69e-07,22;UBERON:0000171,1.69e-07,22;UBERON:0000170,1.69e-07,22;UBERON:0005597,1.69e-07,22;UBERON:0000118,1.69e-07,22;UBERON:0003729,1.80e-07,13;UBERON:0000305,1.95e-07,7;UBERON:0003350,2.17e-07,8;UBERON:0003343,2.54e-07,4;UBERON:0004785,2.54e-07,4;UBERON:0003102,3.30e-07,99;UBERON:0001723,3.78e-07,3;UBERON:0001033,3.78e-07,3;UBERON:0010056,3.78e-07,3;UBERON:0005153,3.92e-07,37;UBERON:0008947,7.05e-07,38;UBERON:0003258,7.05e-07,38;UBERON:0003134,9.55e-07,37;UBERON:0000474,9.55e-07,37 | |||
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| ||
|short_description=p2@SCEL | |||
}} | }} |
Latest revision as of 01:31, 18 September 2015
Short description: | p2@SCEL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SCEL_5end |
Coexpression cluster: | C629_esophagus_amniotic_tongue_throat_tonsil_uterus_salivary |
Association with transcript: | 0bp_to_ENST00000349847, ENST00000377246_5end |
EntrezGene: | SCEL |
HGNC: | 10573 |
UniProt: | O95171 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 6.48e-36 | 42 |
epithelial cell | 7.08e-27 | 253 |
endodermal cell | 4.37e-25 | 58 |
epithelial cell of alimentary canal | 1.09e-17 | 20 |
respiratory epithelial cell | 9.73e-12 | 13 |
extraembryonic cell | 1.62e-10 | 19 |
epithelial cell of uterus | 1.44e-07 | 6 |
stromal cell of endometrium | 1.44e-07 | 6 |
placental epithelial cell | 7.48e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 9.58e-16 | 14 |
carcinoma | 2.90e-13 | 106 |
cell type cancer | 4.76e-08 | 143 |
female reproductive endometrioid cancer | 1.44e-07 | 6 |