FFCP PHASE1:Hg19::chr1:39395165..39395198,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:39395165..39395198,- to FFCP PHASE1:Hg19::chr1:39395165..39395198,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54933 | |EntrezGene=54933 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16083 | |HGNC=16083 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NX52 | |UniProt=Q9NX52 | ||
|association_with_transcript=0bp_to_ENST00000372985,uc010oio.1_5end | |||
|cluster_id=chr1:39395165..39395198,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_1_at_RHBDL2_5end | |||
|id=chr1:39395165..39395198,- | |||
|ontology_enrichment_celltype=CL:0002586!2.44e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002586;1.45e-10;3!CL:0000149;4.86e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,1.55e-10,3;CL:0000149,5.11e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.29e-20;82!UBERON:0006241;1.37e-11;3!UBERON:0003057;1.37e-11;3!UBERON:0010122;7.23e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.33e-76!57;UBERON:0005068!1.33e-76!57;UBERON:0006241!1.33e-76!57;UBERON:0007135!1.33e-76!57;UBERON:0005743!1.93e-73!86;UBERON:0002616!2.92e-69!59;UBERON:0000073!5.42e-68!94;UBERON:0001016!5.42e-68!94;UBERON:0001017!2.95e-66!82;UBERON:0000955!3.12e-65!69;UBERON:0006238!3.12e-65!69;UBERON:0003075!3.01e-63!86;UBERON:0007284!3.01e-63!86;UBERON:0002346!8.83e-60!90;UBERON:0002780!2.54e-57!41;UBERON:0001890!2.54e-57!41;UBERON:0006240!2.54e-57!41;UBERON:0003080!9.77e-56!42;UBERON:0002020!1.06e-53!34;UBERON:0003528!1.06e-53!34;UBERON:0001893!1.11e-53!34;UBERON:0002791!1.73e-51!33;UBERON:0001869!4.92e-49!32;UBERON:0003056!3.96e-45!61;UBERON:0007023!1.12e-44!115;UBERON:0000033!5.51e-41!123;UBERON:0000153!5.69e-40!129;UBERON:0007811!5.69e-40!129;UBERON:0000956!2.14e-34!25;UBERON:0000203!2.14e-34!25;UBERON:0004121!8.23e-34!169;UBERON:0002619!7.99e-33!22;UBERON:0000924!1.15e-32!173;UBERON:0006601!1.15e-32!173;UBERON:0001950!8.22e-29!20;UBERON:0002308!2.95e-21!9;UBERON:0000125!2.95e-21!9;UBERON:0003076!5.88e-21!15;UBERON:0003057!5.88e-21!15;UBERON:0002420!1.91e-20!9;UBERON:0007245!1.91e-20!9;UBERON:0010009!1.91e-20!9;UBERON:0010011!1.91e-20!9;UBERON:0000454!1.91e-20!9;UBERON:0000025!1.17e-18!194;UBERON:0004732!4.00e-17!13;UBERON:0009663!1.07e-16!7;UBERON:0002298!3.54e-15!8;UBERON:0004733!5.80e-15!12;UBERON:0002028!5.80e-15!12;UBERON:0007277!5.80e-15!12;UBERON:0000200!3.90e-14!6;UBERON:0000483!4.93e-14!309;UBERON:0000119!9.58e-14!312;UBERON:0004111!2.30e-12!241;UBERON:0000064!4.36e-12!219;UBERON:0000477!4.70e-12!286;UBERON:0000349!9.77e-12!5;UBERON:0000475!2.48e-11!365;UBERON:0001871!5.32e-10!7;UBERON:0000369!8.72e-10!4;UBERON:0002435!8.72e-10!4;UBERON:0000204!8.72e-10!4;UBERON:0010082!8.72e-10!4;UBERON:0002680!5.07e-09!9;UBERON:0001895!5.07e-09!9;UBERON:0010092!5.07e-09!9;UBERON:0006331!1.34e-08!3;UBERON:0000988!1.63e-08!3;UBERON:0000062!1.79e-08!511;UBERON:0001896!2.23e-08!3;UBERON:0005290!2.23e-08!3;UBERON:0010096!2.23e-08!3;UBERON:0001872!3.29e-08!5;UBERON:0002240!4.86e-08!3;UBERON:0002021!6.79e-08!5;UBERON:0002771!8.27e-08!3;UBERON:0005174!9.53e-08!5;UBERON:0001137!9.53e-08!5;UBERON:0005383!1.33e-07!3;UBERON:0005382!1.33e-07!3;UBERON:0001781!2.44e-07!3;UBERON:0001782!2.44e-07!3;UBERON:0005424!2.44e-07!3;UBERON:0000966!3.00e-07!5;UBERON:0005388!3.00e-07!5;UBERON:0001802!3.00e-07!5;UBERON:0000481!5.31e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;9.40e-59;34!UBERON:0003528;3.50e-57;34!UBERON:0002020;3.50e-57;34!UBERON:0002791;2.59e-55;32!UBERON:0001869;3.87e-55;32!UBERON:0002780;9.55e-51;41!UBERON:0001890;9.55e-51;41!UBERON:0000073;1.57e-49;53!UBERON:0002616;1.57e-49;53!UBERON:0002619;4.65e-46;22!UBERON:0000956;3.29e-40;25!UBERON:0000203;3.29e-40;25!UBERON:0001950;5.91e-40;20!UBERON:0001017;4.81e-33;75!UBERON:0000955;2.02e-32;68!UBERON:0000125;3.49e-32;9!UBERON:0002308;3.49e-32;9!UBERON:0001016;4.27e-26;83!UBERON:0009663;4.43e-25;7!UBERON:0002420;7.64e-25;9!UBERON:0007245;7.64e-25;9!UBERON:0010009;7.64e-25;9!UBERON:0010011;7.64e-25;9!UBERON:0000454;7.64e-25;9!UBERON:0002298;9.93e-23;6!UBERON:0004732;1.00e-21;13!UBERON:0000200;4.31e-21;6!UBERON:0004733;1.60e-18;12!UBERON:0002028;1.60e-18;12!UBERON:0007023;3.16e-16;114!UBERON:0000369;2.47e-14;4!UBERON:0002435;2.47e-14;4!UBERON:0000204;2.47e-14;4!UBERON:0000988;2.35e-12;3!UBERON:0001872;3.77e-12;5!UBERON:0001896;4.03e-12;3!UBERON:0005290;4.03e-12;3!UBERON:0002021;1.24e-11;5!UBERON:0000349;1.33e-11;5!UBERON:0002240;1.37e-11;3!UBERON:0005174;1.37e-11;3!UBERON:0001137;1.37e-11;3!UBERON:0001870;2.31e-11;3!UBERON:0005383;5.78e-11;3!UBERON:0005382;5.78e-11;3!UBERON:0011216;1.17e-10;132!UBERON:0001781;1.45e-10;3!UBERON:0001782;1.45e-10;3!UBERON:0002680;6.37e-10;9!UBERON:0001895;6.37e-10;9!UBERON:0010314;3.83e-09;132!UBERON:0005162;4.31e-09;2!UBERON:0000122;4.31e-09;2!UBERON:0001897;6.19e-09;2!UBERON:0010225;6.19e-09;2!UBERON:0001875;7.49e-09;2!UBERON:0006514;7.49e-09;2!UBERON:0002148;7.92e-09;2!UBERON:0006331;7.92e-09;2!UBERON:0009662;7.92e-09;2!UBERON:0001871;2.88e-08;6!UBERON:0002771;3.48e-08;2!UBERON:0001954;4.80e-08;2!UBERON:0003022;4.80e-08;2!UBERON:0002421;4.80e-08;2!UBERON:0002600;4.80e-08;2!UBERON:0002702;5.64e-08;2!UBERON:0001873;7.23e-08;2 | |||
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| ||
|short_description=p1@RHBDL2 | |||
}} | }} |
Latest revision as of 23:09, 17 September 2015
Short description: | p1@RHBDL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RHBDL2_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000372985, uc010oio.1_5end |
EntrezGene: | RHBDL2 |
HGNC: | 16083 |
UniProt: | Q9NX52 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 1.55e-10 | 3 |
visual pigment cell | 5.11e-08 | 4 |