FFCP PHASE1:Hg19::chr11:40315686..40315714,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57689 | |EntrezGene=57689 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29317 | |HGNC=29317 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HCJ2 | |UniProt=Q9HCJ2 | ||
|association_with_transcript=-22bp_to_ENST00000278198,NM_020929,uc001mxa.1,uc001mxb.1_5end | |association_with_transcript=-22bp_to_ENST00000278198,NM_020929,uc001mxa.1,uc001mxb.1_5end | ||
|cluster_id=chr11:40315686..40315714,- | |||
|coexpression_cluster_id=C32 | |coexpression_cluster_id=C32 | ||
|description=CAGE_peak_3_at_LRRC4C_5end | |description=CAGE_peak_3_at_LRRC4C_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.15e-13;82!UBERON:0006241;7.27e-08;3!UBERON:0003057;7.27e-08;3 | |ontology_enrichment_development_v019=UBERON:0006601;4.15e-13;82!UBERON:0006241;7.27e-08;3!UBERON:0003057;7.27e-08;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.92e-75!57;UBERON:0005068!9.92e-75!57;UBERON:0006241!9.92e-75!57;UBERON:0007135!9.92e-75!57;UBERON:0002346!1.68e-69!90;UBERON:0003075!4.80e-66!86;UBERON:0007284!4.80e-66!86;UBERON:0002616!5.82e-65!59;UBERON:0002780!3.25e-64!41;UBERON:0001890!3.25e-64!41;UBERON:0006240!3.25e-64!41;UBERON:0001017!6.11e-63!82;UBERON:0003080!2.08e-62!42;UBERON:0005743!1.21e-61!86;UBERON:0000955!1.40e-60!69;UBERON:0006238!1.40e-60!69;UBERON:0000073!2.06e-58!94;UBERON:0001016!2.06e-58!94;UBERON:0002020!3.10e-56!34;UBERON:0003528!3.10e-56!34;UBERON:0001893!5.08e-56!34;UBERON:0002791!3.11e-54!33;UBERON:0001869!1.18e-52!32;UBERON:0003056!1.74e-50!61;UBERON:0007023!7.71e-50!115;UBERON:0000956!3.92e-40!25;UBERON:0000203!3.92e-40!25;UBERON:0000924!1.41e-39!173;UBERON:0006601!1.41e-39!173;UBERON:0000153!3.05e-39!129;UBERON:0007811!3.05e-39!129;UBERON:0000033!8.05e-39!123;UBERON:0004121!8.67e-37!169;UBERON:0002619!4.58e-36!22;UBERON:0001950!1.72e-32!20;UBERON:0002420!1.27e-17!9;UBERON:0007245!1.27e-17!9;UBERON:0010009!1.27e-17!9;UBERON:0010011!1.27e-17!9;UBERON:0000454!1.27e-17!9;UBERON:0002308!2.73e-17!9;UBERON:0000125!2.73e-17!9;UBERON:0000025!8.92e-17!194;UBERON:0000477!5.93e-16!286;UBERON:0009663!9.33e-14!7;UBERON:0003076!1.52e-13!15;UBERON:0003057!1.52e-13!15;UBERON:0000483!1.75e-13!309;UBERON:0000119!3.57e-13!312;UBERON:0004111!5.78e-13!241;UBERON:0001871!9.03e-13!7;UBERON:0000200!1.06e-12!6;UBERON:0000475!1.76e-12!365;UBERON:0000064!1.77e-12!219;UBERON:0000481!1.51e-11!347;UBERON:0002298!2.32e-11!8;UBERON:0000349!7.07e-11!5;UBERON:0001872!1.77e-10!5;UBERON:0000922!5.00e-10!612;UBERON:0001894!1.68e-09!7;UBERON:0006222!1.68e-09!7;UBERON:0000062!3.09e-09!511;UBERON:0004733!6.41e-09!12;UBERON:0002028!6.41e-09!12;UBERON:0007277!6.41e-09!12;UBERON:0000369!6.64e-09!4;UBERON:0002435!6.64e-09!4;UBERON:0000204!6.64e-09!4;UBERON:0010082!6.64e-09!4;UBERON:0002050!2.73e-08!605;UBERON:0005423!2.73e-08!605;UBERON:0004732!4.12e-08!13;UBERON:0000468!5.62e-08!659;UBERON:0000923!8.66e-08!604;UBERON:0005291!8.66e-08!604;UBERON:0006598!8.66e-08!604;UBERON:0002532!8.66e-08!604;UBERON:0002771!1.53e-07!3;UBERON:0002021!3.17e-07!5;UBERON:0005383!4.12e-07!3;UBERON:0005382!4.12e-07!3;UBERON:0002240!5.43e-07!3;UBERON:0006331!8.18e-07!3;UBERON:0000988!9.54e-07!3 | |ontology_enrichment_uberon=UBERON:0001049!9.92e-75!57;UBERON:0005068!9.92e-75!57;UBERON:0006241!9.92e-75!57;UBERON:0007135!9.92e-75!57;UBERON:0002346!1.68e-69!90;UBERON:0003075!4.80e-66!86;UBERON:0007284!4.80e-66!86;UBERON:0002616!5.82e-65!59;UBERON:0002780!3.25e-64!41;UBERON:0001890!3.25e-64!41;UBERON:0006240!3.25e-64!41;UBERON:0001017!6.11e-63!82;UBERON:0003080!2.08e-62!42;UBERON:0005743!1.21e-61!86;UBERON:0000955!1.40e-60!69;UBERON:0006238!1.40e-60!69;UBERON:0000073!2.06e-58!94;UBERON:0001016!2.06e-58!94;UBERON:0002020!3.10e-56!34;UBERON:0003528!3.10e-56!34;UBERON:0001893!5.08e-56!34;UBERON:0002791!3.11e-54!33;UBERON:0001869!1.18e-52!32;UBERON:0003056!1.74e-50!61;UBERON:0007023!7.71e-50!115;UBERON:0000956!3.92e-40!25;UBERON:0000203!3.92e-40!25;UBERON:0000924!1.41e-39!173;UBERON:0006601!1.41e-39!173;UBERON:0000153!3.05e-39!129;UBERON:0007811!3.05e-39!129;UBERON:0000033!8.05e-39!123;UBERON:0004121!8.67e-37!169;UBERON:0002619!4.58e-36!22;UBERON:0001950!1.72e-32!20;UBERON:0002420!1.27e-17!9;UBERON:0007245!1.27e-17!9;UBERON:0010009!1.27e-17!9;UBERON:0010011!1.27e-17!9;UBERON:0000454!1.27e-17!9;UBERON:0002308!2.73e-17!9;UBERON:0000125!2.73e-17!9;UBERON:0000025!8.92e-17!194;UBERON:0000477!5.93e-16!286;UBERON:0009663!9.33e-14!7;UBERON:0003076!1.52e-13!15;UBERON:0003057!1.52e-13!15;UBERON:0000483!1.75e-13!309;UBERON:0000119!3.57e-13!312;UBERON:0004111!5.78e-13!241;UBERON:0001871!9.03e-13!7;UBERON:0000200!1.06e-12!6;UBERON:0000475!1.76e-12!365;UBERON:0000064!1.77e-12!219;UBERON:0000481!1.51e-11!347;UBERON:0002298!2.32e-11!8;UBERON:0000349!7.07e-11!5;UBERON:0001872!1.77e-10!5;UBERON:0000922!5.00e-10!612;UBERON:0001894!1.68e-09!7;UBERON:0006222!1.68e-09!7;UBERON:0000062!3.09e-09!511;UBERON:0004733!6.41e-09!12;UBERON:0002028!6.41e-09!12;UBERON:0007277!6.41e-09!12;UBERON:0000369!6.64e-09!4;UBERON:0002435!6.64e-09!4;UBERON:0000204!6.64e-09!4;UBERON:0010082!6.64e-09!4;UBERON:0002050!2.73e-08!605;UBERON:0005423!2.73e-08!605;UBERON:0004732!4.12e-08!13;UBERON:0000468!5.62e-08!659;UBERON:0000923!8.66e-08!604;UBERON:0005291!8.66e-08!604;UBERON:0006598!8.66e-08!604;UBERON:0002532!8.66e-08!604;UBERON:0002771!1.53e-07!3;UBERON:0002021!3.17e-07!5;UBERON:0005383!4.12e-07!3;UBERON:0005382!4.12e-07!3;UBERON:0002240!5.43e-07!3;UBERON:0006331!8.18e-07!3;UBERON:0000988!9.54e-07!3 | ||
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|short_description=p3@LRRC4C | |short_description=p3@LRRC4C | ||
}} | }} |
Latest revision as of 22:56, 17 September 2015
Short description: | p3@LRRC4C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LRRC4C_5end |
Coexpression cluster: | C32_middle_occipital_parietal_hippocampus_amygdala_medial_olfactory |
Association with transcript: | -22bp_to_ENST00000278198, NM_020929, uc001mxa.1, uc001mxb.1_5end |
EntrezGene: | LRRC4C |
HGNC: | 29317 |
UniProt: | Q9HCJ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data