FFCP PHASE1:Hg19::chr17:76719638..76719657,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:76719638..76719657,- to FFCP PHASE1:Hg19::chr17:76719638..76719657,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9267 | |EntrezGene=9267 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9501 | |HGNC=9501 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z1T4 | |UniProt=B7Z1T4 | ||
|association_with_transcript=0bp_to_ENST00000539525_5end | |||
|cluster_id=chr17:76719638..76719657,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_3_at_CYTH1_5end | |||
|id=chr17:76719638..76719657,- | |||
|ontology_enrichment_celltype=CL:0000047!5.17e-09!8;CL:0000540!5.87e-07!6;CL:0000031!5.87e-07!6;CL:0000404!5.87e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000333;3.67e-09;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.63e-23;82!UBERON:0006241;2.80e-07;3!UBERON:0003057;2.80e-07;3 | |||
|ontology_enrichment_disease=DOID:171!2.50e-08!10;DOID:3095!5.66e-08!22;DOID:2994!5.66e-08!22 | |||
|ontology_enrichment_disease_v019=DOID:171;3.53e-08;10!DOID:169;1.43e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:171,3.60e-08,10;DOID:169,1.57e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.42e-62!94;UBERON:0001016!1.42e-62!94;UBERON:0001017!1.10e-60!82;UBERON:0001049!2.58e-60!57;UBERON:0005068!2.58e-60!57;UBERON:0006241!2.58e-60!57;UBERON:0007135!2.58e-60!57;UBERON:0007023!3.49e-59!115;UBERON:0005743!9.21e-59!86;UBERON:0002780!5.86e-51!41;UBERON:0001890!5.86e-51!41;UBERON:0006240!5.86e-51!41;UBERON:0002616!5.28e-50!59;UBERON:0003080!2.24e-49!42;UBERON:0002346!3.11e-47!90;UBERON:0000955!6.02e-47!69;UBERON:0006238!6.02e-47!69;UBERON:0003075!6.39e-44!86;UBERON:0007284!6.39e-44!86;UBERON:0002020!1.53e-42!34;UBERON:0003528!1.53e-42!34;UBERON:0001893!1.53e-42!34;UBERON:0002791!2.87e-41!33;UBERON:0001869!9.48e-40!32;UBERON:0000924!3.85e-37!173;UBERON:0006601!3.85e-37!173;UBERON:0004121!2.32e-34!169;UBERON:0003056!6.47e-34!61;UBERON:0000956!7.41e-31!25;UBERON:0000203!7.41e-31!25;UBERON:0002619!6.08e-29!22;UBERON:0000153!2.24e-27!129;UBERON:0007811!2.24e-27!129;UBERON:0001950!1.81e-26!20;UBERON:0000033!9.01e-26!123;UBERON:0000025!3.83e-16!194;UBERON:0002308!5.47e-13!9;UBERON:0000125!5.47e-13!9;UBERON:0004111!6.69e-13!241;UBERON:0002420!1.16e-12!9;UBERON:0007245!1.16e-12!9;UBERON:0010009!1.16e-12!9;UBERON:0010011!1.16e-12!9;UBERON:0000454!1.16e-12!9;UBERON:0003076!5.19e-12!15;UBERON:0003057!5.19e-12!15;UBERON:0000922!7.16e-11!612;UBERON:0001871!7.63e-11!7;UBERON:0000477!1.88e-10!286;UBERON:0009663!2.09e-10!7;UBERON:0004732!7.49e-10!13;UBERON:0001894!1.24e-09!7;UBERON:0006222!1.24e-09!7;UBERON:0000468!2.59e-09!659;UBERON:0000475!2.95e-09!365;UBERON:0000483!4.39e-09!309;UBERON:0000064!5.32e-09!219;UBERON:0000481!5.78e-09!347;UBERON:0002298!6.22e-09!8;UBERON:0000119!8.76e-09!312;UBERON:0000200!9.72e-09!6;UBERON:0004733!1.26e-08!12;UBERON:0002028!1.26e-08!12;UBERON:0007277!1.26e-08!12;UBERON:0002050!2.88e-08!605;UBERON:0005423!2.88e-08!605;UBERON:0000923!6.66e-08!604;UBERON:0005291!6.66e-08!604;UBERON:0006598!6.66e-08!604;UBERON:0002532!6.66e-08!604;UBERON:0002021!9.37e-08!5;UBERON:0001872!1.16e-07!5;UBERON:0000349!1.38e-07!5;UBERON:0000062!1.69e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.60e-51;41!UBERON:0001890;3.60e-51;41!UBERON:0001893;6.96e-50;34!UBERON:0003528;8.70e-50;34!UBERON:0002020;8.70e-50;34!UBERON:0002791;3.50e-49;32!UBERON:0001869;4.47e-49;32!UBERON:0000073;1.78e-47;53!UBERON:0002616;1.78e-47;53!UBERON:0002619;6.47e-44;22!UBERON:0000956;3.85e-41;25!UBERON:0000203;3.85e-41;25!UBERON:0001950;4.45e-40;20!UBERON:0001017;3.73e-31;75!UBERON:0000955;6.43e-31;68!UBERON:0001016;5.29e-30;83!UBERON:0000125;3.36e-19;9!UBERON:0002308;3.36e-19;9!UBERON:0002420;1.05e-18;9!UBERON:0007245;1.05e-18;9!UBERON:0010009;1.05e-18;9!UBERON:0010011;1.05e-18;9!UBERON:0000454;1.05e-18;9!UBERON:0009663;3.30e-15;7!UBERON:0004732;4.56e-15;13!UBERON:0001871;4.55e-14;6!UBERON:0001894;5.83e-14;7!UBERON:0002298;3.04e-13;6!UBERON:0004733;3.75e-13;12!UBERON:0002028;3.75e-13;12!UBERON:0011216;5.18e-13;132!UBERON:0000200;1.25e-12;6!UBERON:0007023;1.33e-12;114!UBERON:0000922;3.72e-11;49!UBERON:0002021;4.01e-11;5!UBERON:0001872;5.41e-11;5!UBERON:0000349;7.05e-11;5!UBERON:0000013;3.67e-09;5!UBERON:0002410;3.67e-09;5!UBERON:0002784;3.92e-09;4!UBERON:0000369;5.01e-09;4!UBERON:0002435;5.01e-09;4!UBERON:0000204;5.01e-09;4!UBERON:0002680;4.00e-08;9!UBERON:0001895;4.00e-08;9!UBERON:0010314;7.73e-08;132!UBERON:0003296;8.83e-08;4!UBERON:0010133;8.83e-08;4!UBERON:0000988;1.23e-07;3!UBERON:0002240;2.80e-07;3!UBERON:0005174;2.80e-07;3!UBERON:0001137;2.80e-07;3!UBERON:0001896;2.86e-07;3!UBERON:0005290;2.86e-07;3!UBERON:0000010;3.16e-07;8!UBERON:0005383;4.41e-07;3!UBERON:0005382;4.41e-07;3!UBERON:0001870;5.35e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.93e-90,56;UBERON:0005068,4.93e-90,56;UBERON:0006241,4.93e-90,56;UBERON:0007135,4.93e-90,56;UBERON:0001016,9.62e-88,89;UBERON:0000073,5.43e-84,53;UBERON:0002616,5.43e-84,53;UBERON:0001017,3.78e-81,81;UBERON:0002780,4.16e-72,41;UBERON:0001890,4.16e-72,41;UBERON:0003080,4.16e-72,41;UBERON:0006240,4.16e-72,41;UBERON:0000955,3.01e-70,68;UBERON:0006238,3.01e-70,68;UBERON:0002346,1.15e-67,86;UBERON:0003075,1.40e-66,82;UBERON:0007284,1.40e-66,82;UBERON:0003528,4.22e-59,34;UBERON:0002020,4.22e-59,34;UBERON:0001893,4.22e-59,34;UBERON:0002791,5.51e-55,32;UBERON:0001869,8.09e-55,32;UBERON:0010371,8.41e-55,104;UBERON:0003056,2.79e-52,61;UBERON:0004121,1.00e-51,171;UBERON:0000924,1.00e-51,171;UBERON:0006601,1.00e-51,171;UBERON:0002619,6.56e-44,22;UBERON:0007023,1.25e-43,114;UBERON:0010314,7.21e-43,132;UBERON:0000956,3.66e-41,25;UBERON:0000203,3.66e-41,25;UBERON:0001950,4.51e-40,20;UBERON:0011216,1.02e-38,223;UBERON:0000025,7.57e-20,192;UBERON:0000125,3.40e-19,9;UBERON:0002308,3.40e-19,9;UBERON:0002420,1.08e-18,9;UBERON:0007245,1.08e-18,9;UBERON:0010009,1.08e-18,9;UBERON:0010011,1.08e-18,9;UBERON:0000454,1.08e-18,9;UBERON:0003076,1.93e-18,15;UBERON:0003057,1.93e-18,15;UBERON:0009663,3.30e-15,7;UBERON:0004732,4.46e-15,13;UBERON:0004111,3.80e-14,240;UBERON:0001871,4.65e-14,6;UBERON:0001894,5.13e-14,7;UBERON:0006222,5.13e-14,7;UBERON:0002298,2.99e-13,6;UBERON:0004733,3.67e-13,12;UBERON:0002028,3.67e-13,12;UBERON:0007277,3.67e-13,12;UBERON:0000200,1.23e-12,6;UBERON:0000483,7.02e-12,306;UBERON:0000119,1.33e-11,309;UBERON:0002021,4.02e-11,5;UBERON:0001872,5.58e-11,5;UBERON:0000349,7.28e-11,5;UBERON:0000922,2.42e-10,592;UBERON:0002050,2.76e-09,564;UBERON:0002784,3.92e-09,4;UBERON:0000013,4.10e-09,5;UBERON:0002410,4.10e-09,5;UBERON:0000369,5.01e-09,4;UBERON:0002435,5.01e-09,4;UBERON:0000204,5.01e-09,4;UBERON:0010082,5.01e-09,4;UBERON:0000923,5.46e-09,560;UBERON:0010316,5.46e-09,560;UBERON:0005291,5.46e-09,560;UBERON:0006598,5.46e-09,560;UBERON:0010317,5.46e-09,560;UBERON:0002532,5.46e-09,560;UBERON:0005423,7.60e-09,581;UBERON:0002680,3.98e-08,9;UBERON:0001895,3.98e-08,9;UBERON:0010092,3.98e-08,9;UBERON:0003296,7.82e-08,4;UBERON:0010133,7.82e-08,4;UBERON:0000988,1.23e-07,3;UBERON:0002240,2.75e-07,3;UBERON:0005174,2.75e-07,3;UBERON:0001137,2.75e-07,3;UBERON:0001896,2.80e-07,3;UBERON:0005290,2.80e-07,3;UBERON:0010096,2.80e-07,3;UBERON:0000010,3.40e-07,8;UBERON:0005383,4.41e-07,3;UBERON:0005382,4.41e-07,3;UBERON:0001870,5.19e-07,3 | |||
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|short_description=p3@CYTH1 | |||
}} | }} |
Latest revision as of 22:35, 17 September 2015
Short description: | p3@CYTH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CYTH1_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000539525_5end |
EntrezGene: | CYTH1 |
HGNC: | 9501 |
UniProt: | B7Z1T4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 3.60e-08 | 10 |
neuroendocrine tumor | 1.57e-07 | 6 |