FFCP PHASE1:Hg19::chr12:25205026..25205040,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4033 | |EntrezGene=4033 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6690 | |HGNC=6690 | ||
|TSSclassifier=strong | |||
|UniProt=Q12912 | |UniProt=Q12912 | ||
|association_with_transcript=-140bp_to_NM_001204126,NM_001204127,NM_006152_5end | |association_with_transcript=-140bp_to_NM_001204126,NM_001204127,NM_006152_5end | ||
|cluster_id=chr12:25205026..25205040,+ | |||
|coexpression_cluster_id=C577 | |||
|description=CAGE_peak_9_at_LRMP_5end | |description=CAGE_peak_9_at_LRMP_5end | ||
|id=chr12:25205026..25205040,+ | |id=chr12:25205026..25205040,+ | ||
|ontology_enrichment_celltype=CL:0000542!9.80e-43!53;CL:0000051!9.80e-43!53;CL:0000838!5.05e-41!52;CL:0000738!2.17e-35!140;CL:0000037!5.71e-33!172;CL:0000566!5.71e-33!172;CL:0000988!1.30e-31!182;CL:0002031!1.49e-31!124;CL:0002087!4.99e-30!119;CL:0002032!8.90e-28!165;CL:0000837!8.90e-28!165;CL:0000945!1.69e-25!24;CL:0000826!1.69e-25!24;CL:0000084!9.19e-13!25;CL:0000827!9.19e-13!25;CL:0000236!2.64e-12!14;CL:0000791!6.90e-11!18;CL:0000789!6.90e-11!18;CL:0002420!6.90e-11!18;CL:0002419!6.90e-11!18;CL:0000790!6.90e-11!18;CL:0002393!2.47e-08!9;CL:0002397!2.47e-08!9;CL:0000784!2.68e-08!3;CL:0000134!5.94e-08!358;CL:0002320!1.55e-07!365;CL:0000623!2.93e-07!3;CL:0000825!2.93e-07!3;CL:0000817!3.99e-07!3;CL:0000625!4.31e-07!11;CL:0000875!7.78e-07!3;CL:0002396!7.78e-07!3 | |ontology_enrichment_celltype=CL:0000542!9.80e-43!53;CL:0000051!9.80e-43!53;CL:0000838!5.05e-41!52;CL:0000738!2.17e-35!140;CL:0000037!5.71e-33!172;CL:0000566!5.71e-33!172;CL:0000988!1.30e-31!182;CL:0002031!1.49e-31!124;CL:0002087!4.99e-30!119;CL:0002032!8.90e-28!165;CL:0000837!8.90e-28!165;CL:0000945!1.69e-25!24;CL:0000826!1.69e-25!24;CL:0000084!9.19e-13!25;CL:0000827!9.19e-13!25;CL:0000236!2.64e-12!14;CL:0000791!6.90e-11!18;CL:0000789!6.90e-11!18;CL:0002420!6.90e-11!18;CL:0002419!6.90e-11!18;CL:0000790!6.90e-11!18;CL:0002393!2.47e-08!9;CL:0002397!2.47e-08!9;CL:0000784!2.68e-08!3;CL:0000134!5.94e-08!358;CL:0002320!1.55e-07!365;CL:0000623!2.93e-07!3;CL:0000825!2.93e-07!3;CL:0000817!3.99e-07!3;CL:0000625!4.31e-07!11;CL:0000875!7.78e-07!3;CL:0002396!7.78e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.99e-23;24!CL:0000542;7.16e-18;53!CL:0000784;2.03e-16;3!CL:0002032;6.05e-13;1!CL:0000557;6.05e-13;1!CL:0000764;4.17e-07;2!CL:0000815;4.17e-07;2!CL:0000792;4.17e-07;2!CL:0002677;4.17e-07;2!CL:0000558;4.17e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.83e-23,24;CL:0000826,1.83e-23,24;CL:0000838,2.92e-21,52;CL:0000542,7.73e-21,53;CL:0000051,7.73e-21,53;CL:0000784,1.88e-16,3;CL:0000037,1.15e-13,168;CL:0000988,7.12e-13,177;CL:0000738,9.83e-13,136;CL:0002031,2.61e-12,120;CL:0002087,9.35e-11,115;CL:0002032,1.94e-10,161;CL:0000837,1.94e-10,161;CL:0000764,4.17e-07,2;CL:0000765,4.17e-07,2;CL:0000050,4.17e-07,2;CL:0000038,4.17e-07,2;CL:0000558,4.17e-07,2;CL:0000547,4.17e-07,2;CL:0000549,4.17e-07,2;CL:0000550,4.17e-07,2;CL:0000552,4.17e-07,2;CL:0000815,4.42e-07,2;CL:0000792,4.42e-07,2;CL:0002677,4.42e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000051;7.16e-18;53 | |||
|ontology_enrichment_disease=DOID:0060058!3.41e-14!10 | |ontology_enrichment_disease=DOID:0060058!3.41e-14!10 | ||
|ontology_enrichment_disease_v019=DOID:0060058;1.46e-19;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.46e-19,10;DOID:2531,4.79e-08,51;DOID:0060083,4.79e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0004177!3.34e-08!7;UBERON:0002384!5.63e-07!375 | |ontology_enrichment_uberon=UBERON:0004177!3.34e-08!7;UBERON:0002384!5.63e-07!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;9.00e-25;2!UBERON:0005058;9.00e-25;2!UBERON:0009113;9.00e-25;2!UBERON:0004177;1.69e-10;5!UBERON:0005057;1.69e-10;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,6.84e-13,4;UBERON:0005058,6.84e-13,4;UBERON:0009113,6.84e-13,4;UBERON:0003295,6.84e-13,4;UBERON:0005562,6.84e-13,4;UBERON:0003351,6.77e-09,6;UBERON:0004177,9.56e-08,7;UBERON:0005057,9.56e-08,7 | |||
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| ||
|short_description=p9@LRMP | |short_description=p9@LRMP | ||
}} | }} |
Latest revision as of 22:21, 17 September 2015
Short description: | p9@LRMP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_LRMP_5end |
Coexpression cluster: | C577_lymphoma_Burkitt_diffuse_b_myeloma_plasma_appendix |
Association with transcript: | -140bp_to_NM_001204126, NM_001204127, NM_006152_5end |
EntrezGene: | LRMP |
HGNC: | 6690 |
UniProt: | Q12912 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.83e-23 | 24 |
pro-B cell | 1.83e-23 | 24 |
lymphoid lineage restricted progenitor cell | 2.92e-21 | 52 |
lymphocyte | 7.73e-21 | 53 |
common lymphoid progenitor | 7.73e-21 | 53 |
plasmacytoid dendritic cell | 1.88e-16 | 3 |
hematopoietic stem cell | 1.15e-13 | 168 |
hematopoietic cell | 7.12e-13 | 177 |
leukocyte | 9.83e-13 | 136 |
hematopoietic lineage restricted progenitor cell | 2.61e-12 | 120 |
nongranular leukocyte | 9.35e-11 | 115 |
hematopoietic oligopotent progenitor cell | 1.94e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.94e-10 | 161 |
erythroid lineage cell | 4.17e-07 | 2 |
erythroblast | 4.17e-07 | 2 |
megakaryocyte-erythroid progenitor cell | 4.17e-07 | 2 |
erythroid progenitor cell | 4.17e-07 | 2 |
reticulocyte | 4.17e-07 | 2 |
proerythroblast | 4.17e-07 | 2 |
basophilic erythroblast | 4.17e-07 | 2 |
polychromatophilic erythroblast | 4.17e-07 | 2 |
orthochromatic erythroblast | 4.17e-07 | 2 |
regulatory T cell | 4.42e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 4.42e-07 | 2 |
naive regulatory T cell | 4.42e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
thymus | 6.84e-13 | 4 |
hemolymphoid system gland | 6.84e-13 | 4 |
thymic region | 6.84e-13 | 4 |
pharyngeal gland | 6.84e-13 | 4 |
thymus primordium | 6.84e-13 | 4 |
pharyngeal epithelium | 6.77e-09 | 6 |
hemopoietic organ | 9.56e-08 | 7 |
immune organ | 9.56e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.46e-19 | 10 |
hematologic cancer | 4.79e-08 | 51 |
immune system cancer | 4.79e-08 | 51 |