FFCP PHASE1:Hg19::chr15:48938145..48938164,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2200 | |EntrezGene=2200 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3603 | |HGNC=3603 | ||
|TSSclassifier=strong | |||
|UniProt=P35555 | |UniProt=P35555 | ||
|association_with_transcript=-99bp_to_ENST00000316623_5end | |association_with_transcript=-99bp_to_ENST00000316623_5end | ||
|cluster_id=chr15:48938145..48938164,- | |||
|description=CAGE_peak_11_at_FBN1_5end | |description=CAGE_peak_11_at_FBN1_5end | ||
|id=chr15:48938145..48938164,- | |id=chr15:48938145..48938164,- | ||
|ontology_enrichment_celltype=CL:0000057!1.14e-19!75;CL:0000055!3.77e-19!180;CL:0002620!6.26e-12!23 | |ontology_enrichment_celltype=CL:0000057!1.14e-19!75;CL:0000055!3.77e-19!180;CL:0002620!6.26e-12!23 | ||
|ontology_enrichment_celltype_v019=CL:0002620;3.98e-20;23!CL:0000349;1.68e-10;19!CL:0002541;3.78e-07;3!CL:0000057;3.86e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,2.85e-20,23;CL:0000057,4.07e-12,76;CL:0000349,2.41e-10,19;CL:0002541,3.74e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;1.59e-08;5!DOID:450;1.59e-08;5!DOID:66;1.59e-08;5!DOID:423;1.59e-08;5!DOID:0080000;1.59e-08;5!DOID:11722;1.59e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.26e-08,5;DOID:450,2.26e-08,5;DOID:66,2.26e-08,5;DOID:423,2.26e-08,5;DOID:0080000,2.26e-08,5;DOID:11722,2.26e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!3.98e-08!83;UBERON:0002329!3.98e-08!83;UBERON:0003077!3.98e-08!83;UBERON:0003059!3.98e-08!83;UBERON:0007282!3.98e-08!83;UBERON:0009618!3.98e-08!83;UBERON:0007285!3.98e-08!83;UBERON:0004923!6.27e-08!57;UBERON:0002199!1.40e-07!45;UBERON:0002416!1.40e-07!45;UBERON:0002097!2.74e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;3.36e-11;10!UBERON:0000158;3.36e-11;10!UBERON:0000478;1.93e-10;24!UBERON:0001987;6.47e-10;4!UBERON:0002097;1.66e-09;41!UBERON:0002199;3.39e-08;46!UBERON:0002416;3.39e-08;46!UBERON:0003124;3.78e-07;3!UBERON:0000920;3.78e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,9.70e-19,14;UBERON:0000158,9.70e-19,14;UBERON:0003124,1.84e-15,7;UBERON:0002097,1.80e-12,41;UBERON:0002199,7.64e-11,46;UBERON:0002416,7.64e-11,46;UBERON:0000478,2.25e-10,24;UBERON:0001987,5.41e-10,4;UBERON:0004340,5.41e-10,4;UBERON:0004923,2.78e-08,66;UBERON:0000920,3.74e-07,3 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0.422863212287913,2.00146596706261,0.446961094427288,0,0,0,0.261185628199839,0,0,0.436882744260345,1.05506791291381,0,0,0,0.602694528023977,0.730310090387373,0,0.246242116153576,0.204000691244253,0.313454721478088,0.286235987131057,0.136874425072884,0.502170558379211,0.229240217243854,0.164201178899891,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.722878304769133,0,0.869079113764942,0,0.973269740605272,0.378139268656271,0.665188192387692,1.49319135678314,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0.275118041940067,0,0,0.35576626268671,0,0.402829317109147,0,0,0,0,0.17859945656816,0.22452937262617,0.675668882899933,0,0,0,1.31780417436063,0,0.436094052142534,2.98183171017191,0.633152558322899,0.794455084879313,2.29469296599051,0.354668382198357,0,1.06748995729705,0.74000264525148,0.933633106199299,0.538842688278752,0.326923806226917,0.454072282934794,1.72852777344,0,0,1.1409436430889,0.149448680551801,0.23486899728753,1.94247533241758,0.842704840213491,0.204154171254893,0.122834317311768,0.309977343527296,0,0.247266929278557,0,0,0.505008341862199,0.750711119231785,0.277064115484183,0.877955241761676,0,0.751190294532984,0.226864366320042,2.33206526395521,1.06778694409284,0.211931901159562,3.90118424909723,0.824420233907511,1.54584324027377,0.930584281657949,1.68776332241266,1.16924406193438,1.7670364197088,0.920498986422993,0,3.19508633264953,0.906768884048762,0.847802961552438,0,0,0,0,0,0,0.10366105501537,0,0,1.56449532329816,0.643240938192885,0,0.928735856063958,0,0.236613600079688,0.168584690078102,0,0,0.217879444092406,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0.469634776943287,0.433099343283221,0,0.380508304469197,0,0,0,0,0,0,0.671928512795438,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0.285826432630578,0.448524337381443,0,0.2933531432838,0.258543431515556,0,0.845302752556,0,0,0.257207374262142,0,0,0.142977993658148,0,0.823240336780769,0,0.355391948742546,0.791951872933429,0,0,0.099972991182057,0,0,0,0,0,0,1.30303176000821,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0.12269149171914,0,0,0.207970861530807,1.07057393278297,0.315404830067869,0.937131319941706,0,0,0,1.32845119707087,0.737476674166813,0.173767228936166,0.195801157462741,0,0,0.215714200818617,0,1.21251028578504,0,1.20956117331872,0.992431231275107,0.306923946576125,1.12264037773229,0.768834895534206,0.511707249066704,0.321707842287215,0,0.462629081407967,0.710246901252508,0.9033987161519,0.519254429183621,0.116210378459959,0,0.40101294060657,0,0.114814448164607,0.182091168006717,0.131124414959424,0.451199612907412,0.0770153371044148,0,0,0,0,0.340187410553031,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0.082509499920588,0,0,0,0.386682873168488,0.616194468458578,1.07452572308291,0.275673144969061,0.644521469209642,0,0.852266274161009,0.445160178233687,0,0,0.127612712494584,0,0,1.25924938732256,0,0.308033580176089,0,0,0.18532421910392,0.429374660225974,0.372158369359667,0.632758849437452,0.190630193923825,0,0,0.318203247925937,1.56989728039846,0,0.54907405947211,0.824686816419805,0.202182481573316,0,0,0.48763373908959,0,0,0,0.989838023675989,0,0,0,0,0.578775534266688,0,0,0,0.281695602532241,0.430234056612155,0.294747123039363,0.35667105148125,0.709522128141196,0,0.987884678879706,0.379473173765715,0.349934720244983,0,0,0,0.564862804660675,0,0,0,0.229723400206959,0,0,1.13929437434833,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,9.31103490476991,0,6.45037474408387,0,0,0.333926115068718,0.16480387422676,0,0.19924798825107,0,0,0,0.369254416383208,0.622079175323615,0,0,0,0.295930216910801,0,0,0,0,0,0,0,1.44999915086959,0,0.254253650292766,0,0,0,0.347249989866585,0,0,0,0.110579259931225,0,0,0,0,0.384751292518985,0.341826167541004,0,0,0.434589487688032,5.74202087517455,0.549585560411174,9.59462596833542,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0,0,0,0.208843899010911,0,2.40773294189637,0,0,0,0,0.394584402849391,0,0,0.505492637027904,0,0,0.664653872707185,0,0,0,0,0,0,0,0,0,0.171986032471617,0.0967563312890851,0,0,0.290967049465258,0,0.225980740780532,0.274083849293502,0,0,0,0,0.213452994739353,0.19980960958213,0,0,0,0,0,0,0.543616824294456,1.15063130943567,0,0,0,0,0,0.859530882839914,0,0.837847203816763,0.229160424011684,0.717873024576814,0.199679000498991,0,0.446342914883745,0.470284307407084,1.44119953416961,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0.236417121897595,0.104909176269996,0,0,0,1.42939065274673,0,0,0,0.864221491201268,0.326587360109409,0,0.164185041498678,0.851940108927109,0.226624183040251,0,0,0,0.13223260174269,0,0,0,0,0.414239055347196,0,0,0,0,0,0.5013797880454,0.306345576763462,0,0,0,0,0,0,0.110929051536852,0,0,0.249960815924213,0,0,0,0,0,0.74627401443437,0.467426619694449,0,0.189403005275089,0.251567901752575,0,0.457680136793847,0.302461847526478,0.310874401165561,0,0.159296767163702,0,0.465788870628778,0.414706207840855,0.265841714557995,0,0.300515217994437,0,0.406870733204662,0,0.644463342254931,0,0,0.400027764663154,0.686791410365586,0.336749488765919,2.52369796457302,0.192619830407303,0.428883182749851,0,0.453411851024545,0.463044948647668,0,0.179088841081487,0,0,0,0.192914038270915,0,0,0.345430341731199,0,0.138258436151731,1.55888247071511,0.664324201566815,0.981392365535065,0,0.245772908753719,0,0,0,0,0,1.10463570151104,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,1.05802783107205,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,1.52552838186867,0,0,0.300841313397029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,1.68534503309014,0.115233987555779,0,0.0679697329768317,0,0,0,0.313972371402056,0,0,0.913158720509496,0,0,0.214429632529969,0,0.116241425368125,0.173858272302579,0,0,0.17071847709395,0.691259661814092,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0.154348316215889,0,0,0.735444965261716,0,0.392616934229891,0,0,2.0391253762538,0,0.257831551894309,0,0,0,0,0.730336388246517,0,0,0.315543124386369,0,0,0.5290268405154,0.371995018166751,0.924351257262837,0.432626562123789,0,0.109265571963696,0,0,0,0,0,0.530450887527676,0.267964130156178,0,0.103432995861895,0.426467963801962,0.714193294391221,0,0.124149428591716,0.784923038064294,0.891060215894309,0.808468755832877,0,0.342233301085281,0.134704106029175,0.358611026963382,0,0.162806537221949,0.213454691755431,0,0,0,0.366724332548599,0.406896178315738,1.33151354837103,0.201273793591026,0.320568492303233 | |phase1_expression=0.54503513781167,0.214100523890983,0.422863212287913,2.00146596706261,0.446961094427288,0,0,0,0.261185628199839,0,0,0.436882744260345,1.05506791291381,0,0,0,0.602694528023977,0.730310090387373,0,0.246242116153576,0.204000691244253,0.313454721478088,0.286235987131057,0.136874425072884,0.502170558379211,0.229240217243854,0.164201178899891,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.722878304769133,0,0.869079113764942,0,0.973269740605272,0.378139268656271,0.665188192387692,1.49319135678314,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0.275118041940067,0,0,0.35576626268671,0,0.402829317109147,0,0,0,0,0.17859945656816,0.22452937262617,0.675668882899933,0,0,0,1.31780417436063,0,0.436094052142534,2.98183171017191,0.633152558322899,0.794455084879313,2.29469296599051,0.354668382198357,0,1.06748995729705,0.74000264525148,0.933633106199299,0.538842688278752,0.326923806226917,0.454072282934794,1.72852777344,0,0,1.1409436430889,0.149448680551801,0.23486899728753,1.94247533241758,0.842704840213491,0.204154171254893,0.122834317311768,0.309977343527296,0,0.247266929278557,0,0,0.505008341862199,0.750711119231785,0.277064115484183,0.877955241761676,0,0.751190294532984,0.226864366320042,2.33206526395521,1.06778694409284,0.211931901159562,3.90118424909723,0.824420233907511,1.54584324027377,0.930584281657949,1.68776332241266,1.16924406193438,1.7670364197088,0.920498986422993,0,3.19508633264953,0.906768884048762,0.847802961552438,0,0,0,0,0,0,0.10366105501537,0,0,1.56449532329816,0.643240938192885,0,0.928735856063958,0,0.236613600079688,0.168584690078102,0,0,0.217879444092406,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0.469634776943287,0.433099343283221,0,0.380508304469197,0,0,0,0,0,0,0.671928512795438,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0.285826432630578,0.448524337381443,0,0.2933531432838,0.258543431515556,0,0.845302752556,0,0,0.257207374262142,0,0,0.142977993658148,0,0.823240336780769,0,0.355391948742546,0.791951872933429,0,0,0.099972991182057,0,0,0,0,0,0,1.30303176000821,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0.12269149171914,0,0,0.207970861530807,1.07057393278297,0.315404830067869,0.937131319941706,0,0,0,1.32845119707087,0.737476674166813,0.173767228936166,0.195801157462741,0,0,0.215714200818617,0,1.21251028578504,0,1.20956117331872,0.992431231275107,0.306923946576125,1.12264037773229,0.768834895534206,0.511707249066704,0.321707842287215,0,0.462629081407967,0.710246901252508,0.9033987161519,0.519254429183621,0.116210378459959,0,0.40101294060657,0,0.114814448164607,0.182091168006717,0.131124414959424,0.451199612907412,0.0770153371044148,0,0,0,0,0.340187410553031,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0.082509499920588,0,0,0,0.386682873168488,0.616194468458578,1.07452572308291,0.275673144969061,0.644521469209642,0,0.852266274161009,0.445160178233687,0,0,0.127612712494584,0,0,1.25924938732256,0,0.308033580176089,0,0,0.18532421910392,0.429374660225974,0.372158369359667,0.632758849437452,0.190630193923825,0,0,0.318203247925937,1.56989728039846,0,0.54907405947211,0.824686816419805,0.202182481573316,0,0,0.48763373908959,0,0,0,0.989838023675989,0,0,0,0,0.578775534266688,0,0,0,0.281695602532241,0.430234056612155,0.294747123039363,0.35667105148125,0.709522128141196,0,0.987884678879706,0.379473173765715,0.349934720244983,0,0,0,0.564862804660675,0,0,0,0.229723400206959,0,0,1.13929437434833,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,9.31103490476991,0,6.45037474408387,0,0,0.333926115068718,0.16480387422676,0,0.19924798825107,0,0,0,0.369254416383208,0.622079175323615,0,0,0,0.295930216910801,0,0,0,0,0,0,0,1.44999915086959,0,0.254253650292766,0,0,0,0.347249989866585,0,0,0,0.110579259931225,0,0,0,0,0.384751292518985,0.341826167541004,0,0,0.434589487688032,5.74202087517455,0.549585560411174,9.59462596833542,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0,0,0,0.208843899010911,0,2.40773294189637,0,0,0,0,0.394584402849391,0,0,0.505492637027904,0,0,0.664653872707185,0,0,0,0,0,0,0,0,0,0.171986032471617,0.0967563312890851,0,0,0.290967049465258,0,0.225980740780532,0.274083849293502,0,0,0,0,0.213452994739353,0.19980960958213,0,0,0,0,0,0,0.543616824294456,1.15063130943567,0,0,0,0,0,0.859530882839914,0,0.837847203816763,0.229160424011684,0.717873024576814,0.199679000498991,0,0.446342914883745,0.470284307407084,1.44119953416961,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0.236417121897595,0.104909176269996,0,0,0,1.42939065274673,0,0,0,0.864221491201268,0.326587360109409,0,0.164185041498678,0.851940108927109,0.226624183040251,0,0,0,0.13223260174269,0,0,0,0,0.414239055347196,0,0,0,0,0,0.5013797880454,0.306345576763462,0,0,0,0,0,0,0.110929051536852,0,0,0.249960815924213,0,0,0,0,0,0.74627401443437,0.467426619694449,0,0.189403005275089,0.251567901752575,0,0.457680136793847,0.302461847526478,0.310874401165561,0,0.159296767163702,0,0.465788870628778,0.414706207840855,0.265841714557995,0,0.300515217994437,0,0.406870733204662,0,0.644463342254931,0,0,0.400027764663154,0.686791410365586,0.336749488765919,2.52369796457302,0.192619830407303,0.428883182749851,0,0.453411851024545,0.463044948647668,0,0.179088841081487,0,0,0,0.192914038270915,0,0,0.345430341731199,0,0.138258436151731,1.55888247071511,0.664324201566815,0.981392365535065,0,0.245772908753719,0,0,0,0,0,1.10463570151104,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,1.05802783107205,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,1.52552838186867,0,0,0.300841313397029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,1.68534503309014,0.115233987555779,0,0.0679697329768317,0,0,0,0.313972371402056,0,0,0.913158720509496,0,0,0.214429632529969,0,0.116241425368125,0.173858272302579,0,0,0.17071847709395,0.691259661814092,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0.154348316215889,0,0,0.735444965261716,0,0.392616934229891,0,0,2.0391253762538,0,0.257831551894309,0,0,0,0,0.730336388246517,0,0,0.315543124386369,0,0,0.5290268405154,0.371995018166751,0.924351257262837,0.432626562123789,0,0.109265571963696,0,0,0,0,0,0.530450887527676,0.267964130156178,0,0.103432995861895,0.426467963801962,0.714193294391221,0,0.124149428591716,0.784923038064294,0.891060215894309,0.808468755832877,0,0.342233301085281,0.134704106029175,0.358611026963382,0,0.162806537221949,0.213454691755431,0,0,0,0.366724332548599,0.406896178315738,1.33151354837103,0.201273793591026,0.320568492303233 | ||
|short_description=p11@FBN1 | |short_description=p11@FBN1 | ||
}} | }} |
Latest revision as of 22:04, 17 September 2015
Short description: | p11@FBN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_FBN1_5end |
Coexpression cluster: | NA |
Association with transcript: | -99bp_to_ENST00000316623_5end |
EntrezGene: | FBN1 |
HGNC: | 3603 |
UniProt: | P35555 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.85e-20 | 23 |
fibroblast | 4.07e-12 | 76 |
extraembryonic cell | 2.41e-10 | 19 |
chorionic membrane mesenchymal stem cell | 3.74e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 9.70e-19 | 14 |
membranous layer | 9.70e-19 | 14 |
chorion | 1.84e-15 | 7 |
skin of body | 1.80e-12 | 41 |
integument | 7.64e-11 | 46 |
integumental system | 7.64e-11 | 46 |
extraembryonic structure | 2.25e-10 | 24 |
placenta | 5.41e-10 | 4 |
allantois | 5.41e-10 | 4 |
organ component layer | 2.78e-08 | 66 |
egg chorion | 3.74e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.26e-08 | 5 |
myotonic disease | 2.26e-08 | 5 |
muscle tissue disease | 2.26e-08 | 5 |
myopathy | 2.26e-08 | 5 |
muscular disease | 2.26e-08 | 5 |
myotonic dystrophy | 2.26e-08 | 5 |