FFCP PHASE1:Hg19::chr13:67804509..67804520,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5101 | |EntrezGene=5101 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8661 | |HGNC=8661 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HC56 | |UniProt=Q9HC56 | ||
|association_with_transcript=-41bp_to_ENST00000544246,NM_020403,NM_203487,uc001vik.2,uc001vil.2,uc001vin.3,uc010thl.1_5end | |association_with_transcript=-41bp_to_ENST00000544246,NM_020403,NM_203487,uc001vik.2,uc001vil.2,uc001vin.3,uc010thl.1_5end | ||
|cluster_id=chr13:67804509..67804520,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_PCDH9_5end | |description=CAGE_peak_3_at_PCDH9_5end | ||
|id=chr13:67804509..67804520,- | |id=chr13:67804509..67804520,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.03e-13;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002616!2.74e-33!59;UBERON:0001049!2.99e-30!57;UBERON:0005068!2.99e-30!57;UBERON:0006241!2.99e-30!57;UBERON:0007135!2.99e-30!57;UBERON:0003075!2.29e-28!86;UBERON:0007284!2.29e-28!86;UBERON:0000955!5.55e-27!69;UBERON:0006238!5.55e-27!69;UBERON:0002346!3.19e-26!90;UBERON:0003080!1.35e-24!42;UBERON:0002780!1.37e-23!41;UBERON:0001890!1.37e-23!41;UBERON:0006240!1.37e-23!41;UBERON:0001017!1.46e-23!82;UBERON:0007023!1.49e-23!115;UBERON:0005743!8.74e-23!86;UBERON:0002020!3.03e-21!34;UBERON:0003528!3.03e-21!34;UBERON:0001893!6.48e-21!34;UBERON:0000073!1.01e-20!94;UBERON:0001016!1.01e-20!94;UBERON:0003056!1.50e-20!61;UBERON:0002791!8.20e-20!33;UBERON:0001869!1.32e-19!32;UBERON:0000153!4.59e-19!129;UBERON:0007811!4.59e-19!129;UBERON:0000033!1.24e-18!123;UBERON:0002619!4.90e-18!22;UBERON:0000956!1.71e-16!25;UBERON:0000203!1.71e-16!25;UBERON:0001950!9.63e-16!20;UBERON:0004121!4.28e-15!169;UBERON:0000924!2.94e-14!173;UBERON:0006601!2.94e-14!173;UBERON:0000119!3.42e-10!312;UBERON:0000483!3.48e-10!309;UBERON:0002298!5.89e-10!8;UBERON:0000477!8.78e-09!286;UBERON:0000200!1.04e-08!6;UBERON:0000475!1.28e-08!365;UBERON:0000349!1.50e-07!5;UBERON:0004733!1.54e-07!12;UBERON:0002028!1.54e-07!12;UBERON:0007277!1.54e-07!12;UBERON:0003076!5.96e-07!15;UBERON:0003057!5.96e-07!15;UBERON:0000025!5.96e-07!194;UBERON:0004732!9.17e-07!13;UBERON:0000481!9.34e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;9.98e-72;22!UBERON:0000956;4.26e-63;25!UBERON:0000203;4.26e-63;25!UBERON:0001869;1.43e-60;32!UBERON:0001950;5.31e-60;20!UBERON:0003528;1.50e-56;34!UBERON:0002020;1.50e-56;34!UBERON:0002791;2.90e-56;32!UBERON:0001893;1.59e-55;34!UBERON:0000200;1.22e-39;6!UBERON:0002780;3.63e-36;41!UBERON:0001890;3.63e-36;41!UBERON:0000349;2.12e-33;5!UBERON:0000073;6.69e-33;53!UBERON:0002616;6.69e-33;53!UBERON:0001871;7.67e-24;6!UBERON:0001017;3.91e-21;75!UBERON:0001870;6.17e-21;3!UBERON:0000955;5.65e-18;68!UBERON:0001016;3.89e-15;83!UBERON:0002771;1.07e-14;2!UBERON:0001954;1.07e-14;2!UBERON:0003022;1.07e-14;2!UBERON:0002421;1.07e-14;2!UBERON:0002600;1.07e-14;2!UBERON:0001876;2.87e-14;2!UBERON:0002702;2.87e-14;2!UBERON:0001872;8.62e-13;5!UBERON:0002420;5.18e-12;9!UBERON:0007245;5.18e-12;9!UBERON:0010009;5.18e-12;9!UBERON:0010011;5.18e-12;9!UBERON:0000454;5.18e-12;9!UBERON:0002298;9.61e-11;6!UBERON:0007023;1.48e-10;114!UBERON:0000988;4.26e-10;3!UBERON:0004733;3.52e-09;12!UBERON:0002028;3.52e-09;12!UBERON:0002022;1.65e-08;1!UBERON:0004732;1.76e-08;13!UBERON:0002581;5.58e-08;1!UBERON:0001882;5.58e-08;1!UBERON:0001874;5.58e-08;1!UBERON:0003112;5.58e-08;1!UBERON:0002135;5.58e-08;1!UBERON:0011158;5.58e-08;1!UBERON:0007190;5.58e-08;1!UBERON:0003128;5.58e-08;1!UBERON:0005403;5.58e-08;1!UBERON:0001703;5.58e-08;1!UBERON:0002241;5.58e-08;1!UBERON:0000369;1.43e-07;4!UBERON:0002435;1.43e-07;4!UBERON:0000204;1.43e-07;4!UBERON:0011216;2.58e-07;132!UBERON:0002680;2.58e-07;9!UBERON:0001895;2.58e-07;9!UBERON:0000125;3.53e-07;9!UBERON:0002308;3.53e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,4.96e-72,22;UBERON:0001869,7.04e-70,32;UBERON:0001893,1.12e-65,34;UBERON:0003528,1.45e-65,34;UBERON:0002020,1.45e-65,34;UBERON:0000956,2.30e-63,25;UBERON:0000203,2.30e-63,25;UBERON:0002791,1.92e-62,32;UBERON:0000073,1.48e-61,53;UBERON:0002616,1.48e-61,53;UBERON:0001950,3.18e-60,20;UBERON:0001049,4.29e-58,56;UBERON:0005068,4.29e-58,56;UBERON:0006241,4.29e-58,56;UBERON:0007135,4.29e-58,56;UBERON:0002780,4.02e-54,41;UBERON:0001890,4.02e-54,41;UBERON:0003080,4.02e-54,41;UBERON:0006240,4.02e-54,41;UBERON:0000955,5.76e-51,68;UBERON:0006238,5.76e-51,68;UBERON:0001017,4.69e-46,81;UBERON:0003075,3.68e-42,82;UBERON:0007284,3.68e-42,82;UBERON:0001016,4.13e-41,89;UBERON:0002346,5.09e-40,86;UBERON:0000200,6.12e-40,6;UBERON:0003056,1.81e-35,61;UBERON:0007023,3.08e-35,114;UBERON:0000349,1.09e-33,5;UBERON:0010371,2.12e-32,104;UBERON:0010314,5.29e-27,132;UBERON:0001871,4.36e-24,6;UBERON:0004121,2.26e-23,171;UBERON:0000924,2.26e-23,171;UBERON:0006601,2.26e-23,171;UBERON:0001870,7.62e-21,3;UBERON:0000025,1.45e-15,192;UBERON:0011216,2.47e-15,223;UBERON:0002771,6.91e-15,2;UBERON:0001954,8.49e-15,2;UBERON:0003022,8.49e-15,2;UBERON:0002421,8.49e-15,2;UBERON:0002600,8.49e-15,2;UBERON:0001876,1.68e-14,2;UBERON:0002702,4.04e-14,2;UBERON:0001872,7.09e-13,5;UBERON:0002420,5.52e-12,9;UBERON:0007245,5.52e-12,9;UBERON:0010009,5.52e-12,9;UBERON:0010011,5.52e-12,9;UBERON:0000454,5.52e-12,9;UBERON:0004111,1.51e-11,240;UBERON:0002298,1.10e-10,6;UBERON:0000988,4.00e-10,3;UBERON:0004733,3.73e-09,12;UBERON:0002028,3.73e-09,12;UBERON:0007277,3.73e-09,12;UBERON:0002022,1.65e-08,1;UBERON:0004732,1.85e-08,13;UBERON:0007190,2.90e-08,1;UBERON:0000483,4.55e-08,306;UBERON:0003112,5.40e-08,1;UBERON:0011158,5.40e-08,1;UBERON:0003128,5.40e-08,1;UBERON:0001703,5.40e-08,1;UBERON:0002241,5.40e-08,1;UBERON:0004761,5.40e-08,1;UBERON:0009617,5.40e-08,1;UBERON:0002581,5.79e-08,1;UBERON:0000119,6.04e-08,309;UBERON:0001882,6.19e-08,1;UBERON:0005403,6.19e-08,1;UBERON:0002135,9.29e-08,1;UBERON:0001874,9.94e-08,1;UBERON:0000369,2.00e-07,4;UBERON:0002435,2.00e-07,4;UBERON:0000204,2.00e-07,4;UBERON:0010082,2.00e-07,4;UBERON:0003076,2.41e-07,15;UBERON:0003057,2.41e-07,15;UBERON:0002680,2.42e-07,9;UBERON:0001895,2.42e-07,9;UBERON:0010092,2.42e-07,9;UBERON:0000125,4.16e-07,9;UBERON:0002308,4.16e-07,9 | |||
|phase1_expression=0.363356758541113,0,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0,0,0.247532705920093,0.994192127183747,0,0,0,0,0.246242116153576,0,0,0,0,0.125542639594803,0.305653622991805,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.283604451492204,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0.258416759169329,0,0.33472061276467,0,0,0,0,0,0,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0.140450806702248,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0.277064115484183,0,0,0,0.113432183160021,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0.0974370051611986,0,0.0920498986422993,0.161646056818812,0,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0.122988438543114,0.171567810298526,0.329250856225877,0,0,0.0925884451585296,0,0,0,0.115930404975077,0.117408694235822,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0.07333828582095,0,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0,0,0,0.394061520403854,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0.321707842287215,0,0,0,0.246381468041427,0,0.232420756919918,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247528499761764,0,0,0,0.096670718292122,0.308097234229289,0.460511024178389,0.275673144969061,0.322260734604821,0,0.0852266274161009,0.0890320356467374,0,0,0.127612712494584,0,0.464845549297286,0,0,0,0,0,0,0.286249773483982,0.372158369359667,0.316379424718726,0.38126038784765,0,0.42793898803392,0,0,0.179872457583315,0.54907405947211,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0.354761064070598,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0.0711418433484141,0.159426272728822,0,0,0,0,0.280797178113459,0,0,0,0,0.1605880751037,0.201799707191048,0,0,0.614481528616916,0.223676107892416,0,0,0,0,0,0,0,0,0.293016358543788,0.36408156524854,0,0,0.23874448473769,0,1.22864280839693,1.9882952955326,1.26602474769461,0.222617410045812,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,1.85536196323703,0,0,0,0.724999575434793,0,0,0,0.344743373241465,0,0.173624994933292,0,0.723578631752448,1.52581736317083,0.552896299656123,0,1.09692698576986,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.702793337176017,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0.0821154570532092,0.193978032976839,0,0.225980740780532,0,0,2.91229661397042,0,0,0.213452994739353,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0.273810757783986,0,0.429765441419957,0.525774708558629,1.11712960508902,0.229160424011684,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,1.59045937961861,2.45166131000836,0,0,0,0,0,3.09822738955926,0,0,0,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0.170388021785422,0,0.293104467356165,0,1.55139547633861,0.39669780522807,0,0,0,0.314408610199332,0,0,0,0,0,1.08803560673895,0.2506898940227,0.612691153526923,0,0,1.77213635993397,1.70836770862748,1.001527445652,1.14681839138014,0.665574309221114,0.620964029413834,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0.251567901752575,0,0,0,0.310874401165561,0,0,0,0.155262956876259,0,0.797525143673985,0,0,0,0.406870733204662,0,0,0,0.398095888698616,0.400027764663154,0.343395705182793,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0.176689145945881,0,0,0,0,0,2.90342715918635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0.394308725006267,0,0,0.3062454773532,1.34881372702565,0,1.11743701340006,1.64093091392604,0.252071696221718,0.829887029570615,1.45328081068666,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,1.89105236931505,0.781078098613847,2.06686796501184,1.77564268542939,0,0.548257766857182,0,0,0,0.535701835878287,0.336283722218824,0,0.227662191351298,0,0.345701962667338,0,2.24300118823545,1.44700101838268,0,0,0.078493092850514,1.09980912941201,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,0,0,0,0.0939839179798536,0.128915775947154,0,0,0,0,0,0,0.286679166302903,0.315543124386369,1.29183831362738,0,0,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0.267964130156178,0,0.620597975171371,0.213233981900981,0,0.193766729508018,0.0620747142958579,0,0.190941474834495,0.202117188958219,0.217716747896961,0,0,0.0717222053926763,0,0,0.106727345877715,1.9307228228694,0,0,0,0.406896178315738,0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| ||
|short_description=p3@PCDH9 | |short_description=p3@PCDH9 | ||
}} | }} |
Latest revision as of 21:22, 17 September 2015
Short description: | p3@PCDH9 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PCDH9_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -41bp_to_ENST00000544246, NM_020403, NM_203487, uc001vik.2, uc001vil.2, uc001vin.3, uc010thl.1_5end |
EntrezGene: | PCDH9 |
HGNC: | 8661 |
UniProt: | Q9HC56 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data