FFCP PHASE1:Hg19::chr2:162480918..162480963,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:162480918..162480963,+ to FFCP PHASE1:Hg19::chr2:162480918..162480963,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57282 | |EntrezGene=57282 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13811 | |HGNC=13811 | ||
|TSSclassifier=strong | |||
|UniProt=C9J240,Q6U841,C9JV56 | |UniProt=C9J240,Q6U841,C9JV56 | ||
|association_with_transcript=0bp_to_ENST00000272716,ENST00000446997,ENST00000449513,ENST00000461456,ENST00000481721_5end | |||
|cluster_id=chr2:162480918..162480963,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_SLC4A10_5end | |||
|id=chr2:162480918..162480963,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.14e-09!18;CL:0000789!1.14e-09!18;CL:0002420!1.14e-09!18;CL:0002419!1.14e-09!18;CL:0000790!1.14e-09!18;CL:0000625!1.09e-07!11;CL:0000047!7.12e-07!8 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.64e-19;82!UBERON:0006215;5.58e-08;3!UBERON:0006241;3.47e-07;3!UBERON:0003057;3.47e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!2.48e-65!86;UBERON:0001017!4.16e-63!82;UBERON:0001049!7.73e-63!57;UBERON:0005068!7.73e-63!57;UBERON:0006241!7.73e-63!57;UBERON:0007135!7.73e-63!57;UBERON:0000073!2.38e-62!94;UBERON:0001016!2.38e-62!94;UBERON:0002780!1.96e-53!41;UBERON:0001890!1.96e-53!41;UBERON:0006240!1.96e-53!41;UBERON:0002616!1.33e-52!59;UBERON:0003080!8.46e-52!42;UBERON:0003075!1.93e-51!86;UBERON:0007284!1.93e-51!86;UBERON:0000955!4.66e-51!69;UBERON:0006238!4.66e-51!69;UBERON:0002346!5.43e-50!90;UBERON:0001893!2.85e-45!34;UBERON:0002020!3.56e-45!34;UBERON:0003528!3.56e-45!34;UBERON:0003056!8.68e-45!61;UBERON:0002791!6.58e-44!33;UBERON:0001869!4.54e-43!32;UBERON:0007023!9.25e-41!115;UBERON:0000956!4.84e-34!25;UBERON:0000203!4.84e-34!25;UBERON:0000033!4.98e-32!123;UBERON:0002619!7.92e-32!22;UBERON:0000153!9.15e-32!129;UBERON:0007811!9.15e-32!129;UBERON:0004121!3.56e-31!169;UBERON:0000924!5.88e-31!173;UBERON:0006601!5.88e-31!173;UBERON:0001950!3.80e-29!20;UBERON:0002420!1.01e-12!9;UBERON:0007245!1.01e-12!9;UBERON:0010009!1.01e-12!9;UBERON:0010011!1.01e-12!9;UBERON:0000454!1.01e-12!9;UBERON:0000025!1.18e-12!194;UBERON:0002308!2.16e-12!9;UBERON:0000125!2.16e-12!9;UBERON:0003076!3.63e-12!15;UBERON:0003057!3.63e-12!15;UBERON:0001871!6.30e-12!7;UBERON:0009663!4.89e-10!7;UBERON:0000200!7.16e-10!6;UBERON:0001894!2.20e-09!7;UBERON:0006222!2.20e-09!7;UBERON:0004733!5.33e-09!12;UBERON:0002028!5.33e-09!12;UBERON:0007277!5.33e-09!12;UBERON:0002298!1.42e-08!8;UBERON:0004111!2.21e-08!241;UBERON:0000349!2.70e-08!5;UBERON:0001872!3.49e-08!5;UBERON:0004732!4.09e-08!13;UBERON:0002021!4.25e-08!5;UBERON:0000064!2.57e-07!219;UBERON:0000483!3.16e-07!309;UBERON:0000477!3.32e-07!286;UBERON:0000119!5.63e-07!312;UBERON:0000369!8.32e-07!4;UBERON:0002435!8.32e-07!4;UBERON:0000204!8.32e-07!4;UBERON:0010082!8.32e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.60e-57;41!UBERON:0001890;1.60e-57;41!UBERON:0001893;2.74e-57;34!UBERON:0001869;3.24e-57;32!UBERON:0003528;3.96e-57;34!UBERON:0002020;3.96e-57;34!UBERON:0002791;9.82e-57;32!UBERON:0000073;9.97e-54;53!UBERON:0002616;9.97e-54;53!UBERON:0002619;4.71e-52;22!UBERON:0000956;6.58e-49;25!UBERON:0000203;6.58e-49;25!UBERON:0001950;1.44e-47;20!UBERON:0001017;1.00e-35;75!UBERON:0000955;5.14e-35;68!UBERON:0001016;8.98e-32;83!UBERON:0002420;4.79e-20;9!UBERON:0007245;4.79e-20;9!UBERON:0010009;4.79e-20;9!UBERON:0010011;4.79e-20;9!UBERON:0000454;4.79e-20;9!UBERON:0000125;1.70e-19;9!UBERON:0002308;1.70e-19;9!UBERON:0001871;1.71e-16;6!UBERON:0009663;1.40e-15;7!UBERON:0000200;2.30e-15;6!UBERON:0004733;9.47e-15;12!UBERON:0002028;9.47e-15;12!UBERON:0001894;1.09e-14;7!UBERON:0007023;1.43e-14;114!UBERON:0002298;4.62e-14;6!UBERON:0004732;1.85e-13;13!UBERON:0000349;9.39e-13;5!UBERON:0001872;1.45e-12;5!UBERON:0002021;1.97e-12;5!UBERON:0011216;2.99e-12;132!UBERON:0000369;2.75e-10;4!UBERON:0002435;2.75e-10;4!UBERON:0000204;2.75e-10;4!UBERON:0002680;5.14e-09;9!UBERON:0001895;5.14e-09;9!UBERON:0002784;8.88e-09;4!UBERON:0003296;9.98e-09;4!UBERON:0010133;9.98e-09;4!UBERON:0001870;1.16e-08;3!UBERON:0001896;4.37e-08;3!UBERON:0005290;4.37e-08;3!UBERON:0005383;4.42e-08;3!UBERON:0005382;4.42e-08;3!UBERON:0010314;6.13e-08;132!UBERON:0000988;1.19e-07;3!UBERON:0002240;3.47e-07;3!UBERON:0005174;3.47e-07;3!UBERON:0001137;3.47e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,8.51e-101,56;UBERON:0005068,8.51e-101,56;UBERON:0006241,8.51e-101,56;UBERON:0007135,8.51e-101,56;UBERON:0000073,9.40e-95,53;UBERON:0002616,9.40e-95,53;UBERON:0001017,1.52e-91,81;UBERON:0001016,2.37e-86,89;UBERON:0002780,3.42e-81,41;UBERON:0001890,3.42e-81,41;UBERON:0003080,3.42e-81,41;UBERON:0006240,3.42e-81,41;UBERON:0000955,1.52e-79,68;UBERON:0006238,1.52e-79,68;UBERON:0003075,9.27e-70,82;UBERON:0007284,9.27e-70,82;UBERON:0002346,1.88e-68,86;UBERON:0001893,1.50e-67,34;UBERON:0003528,2.14e-67,34;UBERON:0002020,2.14e-67,34;UBERON:0001869,7.38e-64,32;UBERON:0002791,2.69e-63,32;UBERON:0003056,1.81e-56,61;UBERON:0002619,5.32e-52,22;UBERON:0010371,7.97e-52,104;UBERON:0000956,7.36e-49,25;UBERON:0000203,7.36e-49,25;UBERON:0001950,1.62e-47,20;UBERON:0007023,6.40e-45,114;UBERON:0004121,5.97e-42,171;UBERON:0000924,5.97e-42,171;UBERON:0006601,5.97e-42,171;UBERON:0010314,3.30e-41,132;UBERON:0011216,8.84e-32,223;UBERON:0000025,3.18e-21,192;UBERON:0002420,4.24e-20,9;UBERON:0007245,4.24e-20,9;UBERON:0010009,4.24e-20,9;UBERON:0010011,4.24e-20,9;UBERON:0000454,4.24e-20,9;UBERON:0003076,4.63e-20,15;UBERON:0003057,4.63e-20,15;UBERON:0000125,1.49e-19,9;UBERON:0002308,1.49e-19,9;UBERON:0001871,1.90e-16,6;UBERON:0009663,1.22e-15,7;UBERON:0000200,2.30e-15,6;UBERON:0004733,9.56e-15,12;UBERON:0002028,9.56e-15,12;UBERON:0007277,9.56e-15,12;UBERON:0001894,1.49e-14,7;UBERON:0006222,1.49e-14,7;UBERON:0004111,4.06e-14,240;UBERON:0002298,4.68e-14,6;UBERON:0004732,1.87e-13,13;UBERON:0000349,9.51e-13,5;UBERON:0001872,1.45e-12,5;UBERON:0002021,2.01e-12,5;UBERON:0000369,2.76e-10,4;UBERON:0002435,2.76e-10,4;UBERON:0000204,2.76e-10,4;UBERON:0010082,2.76e-10,4;UBERON:0000483,7.24e-10,306;UBERON:0000119,1.23e-09,309;UBERON:0002680,5.15e-09,9;UBERON:0001895,5.15e-09,9;UBERON:0010092,5.15e-09,9;UBERON:0001870,1.16e-08,3;UBERON:0002784,1.21e-08,4;UBERON:0003296,1.37e-08,4;UBERON:0010133,1.37e-08,4;UBERON:0001896,4.42e-08,3;UBERON:0005383,4.42e-08,3;UBERON:0005290,4.42e-08,3;UBERON:0005382,4.42e-08,3;UBERON:0010096,4.42e-08,3;UBERON:0000988,1.19e-07,3;UBERON:0002240,3.39e-07,3;UBERON:0005174,3.39e-07,3;UBERON:0001137,3.39e-07,3 | |||
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|short_description=p1@SLC4A10 | |||
}} | }} |
Latest revision as of 20:52, 17 September 2015
Short description: | p1@SLC4A10 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC4A10_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000272716, ENST00000446997, ENST00000449513, ENST00000461456, ENST00000481721_5end |
EntrezGene: | SLC4A10 |
HGNC: | 13811 |
UniProt: | C9J240Q6U841C9JV56 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data