FFCP PHASE1:Hg19::chr11:35440952..35440970,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:35440952..35440970,- to FFCP PHASE1:Hg19::chr11:35440952..35440970,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6506 | |EntrezGene=6506 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10940 | |HGNC=10940 | ||
|TSSclassifier=strong | |||
|UniProt=P43004 | |UniProt=P43004 | ||
|association_with_transcript=134bp_to_NM_004171,uc001mwd.2,uc010rev.1_5end | |||
|cluster_id=chr11:35440952..35440970,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_SLC1A2_5end | |||
|id=chr11:35440952..35440970,- | |||
|ontology_enrichment_celltype=CL:0002319!3.98e-10!25;CL:0000047!2.18e-07!8 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,3.71e-08,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.48e-21;82!UBERON:0006241;3.44e-09;3!UBERON:0003057;3.44e-09;3!UBERON:0006215;6.21e-09;3!UBERON:0003056;2.71e-08;3!UBERON:0010122;2.74e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.18e-84!82;UBERON:0000073!2.58e-82!94;UBERON:0001016!2.58e-82!94;UBERON:0005743!2.94e-82!86;UBERON:0001049!3.29e-82!57;UBERON:0005068!3.29e-82!57;UBERON:0006241!3.29e-82!57;UBERON:0007135!3.29e-82!57;UBERON:0000955!1.82e-69!69;UBERON:0006238!1.82e-69!69;UBERON:0002616!3.45e-69!59;UBERON:0002780!8.13e-63!41;UBERON:0001890!8.13e-63!41;UBERON:0006240!8.13e-63!41;UBERON:0003080!4.93e-61!42;UBERON:0001893!4.08e-58!34;UBERON:0002020!4.39e-58!34;UBERON:0003528!4.39e-58!34;UBERON:0003075!1.01e-57!86;UBERON:0007284!1.01e-57!86;UBERON:0002791!2.66e-56!33;UBERON:0001869!7.72e-55!32;UBERON:0002346!2.32e-54!90;UBERON:0003056!1.41e-42!61;UBERON:0000956!3.27e-42!25;UBERON:0000203!3.27e-42!25;UBERON:0004121!9.34e-41!169;UBERON:0000924!2.50e-39!173;UBERON:0006601!2.50e-39!173;UBERON:0002619!5.10e-38!22;UBERON:0000033!1.22e-37!123;UBERON:0007023!1.81e-37!115;UBERON:0000153!4.58e-35!129;UBERON:0007811!4.58e-35!129;UBERON:0001950!3.02e-34!20;UBERON:0003076!3.63e-21!15;UBERON:0003057!3.63e-21!15;UBERON:0004732!7.49e-18!13;UBERON:0002420!2.46e-17!9;UBERON:0007245!2.46e-17!9;UBERON:0010009!2.46e-17!9;UBERON:0010011!2.46e-17!9;UBERON:0000454!2.46e-17!9;UBERON:0002308!5.37e-17!9;UBERON:0000125!5.37e-17!9;UBERON:0004733!1.97e-16!12;UBERON:0002028!1.97e-16!12;UBERON:0007277!1.97e-16!12;UBERON:0000025!7.97e-16!194;UBERON:0009663!1.18e-13!7;UBERON:0000200!4.27e-12!6;UBERON:0001871!5.44e-12!7;UBERON:0002680!9.01e-12!9;UBERON:0001895!9.01e-12!9;UBERON:0010092!9.01e-12!9;UBERON:0004111!1.86e-11!241;UBERON:0002298!4.66e-11!8;UBERON:0000349!6.26e-11!5;UBERON:0000475!1.76e-10!365;UBERON:0001872!3.65e-10!5;UBERON:0002021!3.72e-10!5;UBERON:0000064!3.37e-09!219;UBERON:0000369!6.13e-09!4;UBERON:0002435!6.13e-09!4;UBERON:0000204!6.13e-09!4;UBERON:0010082!6.13e-09!4;UBERON:0000483!8.02e-09!309;UBERON:0000119!1.39e-08!312;UBERON:0000477!2.64e-08!286;UBERON:0000468!5.12e-08!659;UBERON:0000062!6.51e-08!511;UBERON:0005383!4.24e-07!3;UBERON:0005382!4.24e-07!3;UBERON:0002037!4.98e-07!6;UBERON:0006215!4.98e-07!6;UBERON:0000467!5.17e-07!625;UBERON:0000480!5.82e-07!626;UBERON:0002771!6.59e-07!3;UBERON:0000922!8.19e-07!612;UBERON:0001894!8.40e-07!7;UBERON:0006222!8.40e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.35e-73;34!UBERON:0003528;8.70e-73;34!UBERON:0002020;8.70e-73;34!UBERON:0001869;4.68e-72;32!UBERON:0002791;8.77e-72;32!UBERON:0002780;1.25e-66;41!UBERON:0001890;1.25e-66;41!UBERON:0000073;3.51e-62;53!UBERON:0002616;3.51e-62;53!UBERON:0000956;9.19e-61;25!UBERON:0000203;9.19e-61;25!UBERON:0002619;5.29e-59;22!UBERON:0001950;4.48e-53;20!UBERON:0000955;1.62e-45;68!UBERON:0001017;1.11e-42;75!UBERON:0001016;6.10e-38;83!UBERON:0002420;3.10e-26;9!UBERON:0007245;3.10e-26;9!UBERON:0010009;3.10e-26;9!UBERON:0010011;3.10e-26;9!UBERON:0000454;3.10e-26;9!UBERON:0000125;1.06e-25;9!UBERON:0002308;1.06e-25;9!UBERON:0009663;1.80e-20;7!UBERON:0004732;1.03e-19;13!UBERON:0000200;4.95e-18;6!UBERON:0004733;1.34e-17;12!UBERON:0002028;1.34e-17;12!UBERON:0002298;7.72e-17;6!UBERON:0000349;3.41e-16;5!UBERON:0007023;1.54e-15;114!UBERON:0001871;1.93e-15;6!UBERON:0001872;5.35e-15;5!UBERON:0002021;5.59e-15;5!UBERON:0011216;3.64e-13;132!UBERON:0000369;4.24e-13;4!UBERON:0002435;4.24e-13;4!UBERON:0000204;4.24e-13;4!UBERON:0002784;1.74e-11;4!UBERON:0002680;7.11e-11;9!UBERON:0001895;7.11e-11;9!UBERON:0005383;3.17e-10;3!UBERON:0005382;3.17e-10;3!UBERON:0001894;3.64e-10;7!UBERON:0001870;7.53e-10;3!UBERON:0010314;1.27e-09;132!UBERON:0000988;1.94e-09;3!UBERON:0002240;3.44e-09;3!UBERON:0005174;3.44e-09;3!UBERON:0001137;3.44e-09;3!UBERON:0001896;4.20e-09;3!UBERON:0005290;4.20e-09;3!UBERON:0001954;1.56e-07;2!UBERON:0003022;1.56e-07;2!UBERON:0002421;1.56e-07;2!UBERON:0002600;1.56e-07;2!UBERON:0001876;1.82e-07;2!UBERON:0001873;2.74e-07;2!UBERON:0002771;3.60e-07;2!UBERON:0002702;4.70e-07;2!UBERON:0002148;6.41e-07;2!UBERON:0006331;6.41e-07;2!UBERON:0009662;6.41e-07;2!UBERON:0001897;7.21e-07;2!UBERON:0010225;7.21e-07;2!UBERON:0001875;8.96e-07;2!UBERON:0006514;8.96e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.35e-118,56;UBERON:0005068,1.35e-118,56;UBERON:0006241,1.35e-118,56;UBERON:0007135,1.35e-118,56;UBERON:0001017,8.30e-115,81;UBERON:0000073,1.53e-110,53;UBERON:0002616,1.53e-110,53;UBERON:0001016,9.27e-106,89;UBERON:0000955,1.38e-98,68;UBERON:0006238,1.38e-98,68;UBERON:0002780,8.46e-94,41;UBERON:0001890,8.46e-94,41;UBERON:0003080,8.46e-94,41;UBERON:0006240,8.46e-94,41;UBERON:0003075,2.67e-87,82;UBERON:0007284,2.67e-87,82;UBERON:0001893,1.23e-85,34;UBERON:0003528,1.38e-85,34;UBERON:0002020,1.38e-85,34;UBERON:0002346,1.14e-82,86;UBERON:0001869,1.72e-80,32;UBERON:0002791,4.19e-80,32;UBERON:0003056,3.97e-70,61;UBERON:0010371,3.41e-66,104;UBERON:0000956,9.70e-61,25;UBERON:0000203,9.70e-61,25;UBERON:0002619,5.07e-59,22;UBERON:0001950,4.36e-53,20;UBERON:0010314,8.47e-52,132;UBERON:0004121,5.13e-51,171;UBERON:0000924,5.13e-51,171;UBERON:0006601,5.13e-51,171;UBERON:0007023,5.68e-51,114;UBERON:0011216,2.31e-40,223;UBERON:0000025,1.62e-28,192;UBERON:0002420,3.11e-26,9;UBERON:0007245,3.11e-26,9;UBERON:0010009,3.11e-26,9;UBERON:0010011,3.11e-26,9;UBERON:0000454,3.11e-26,9;UBERON:0000125,1.06e-25,9;UBERON:0002308,1.06e-25,9;UBERON:0003076,1.10e-24,15;UBERON:0003057,1.10e-24,15;UBERON:0009663,1.83e-20,7;UBERON:0004111,3.05e-20,240;UBERON:0004732,9.67e-20,13;UBERON:0000200,5.03e-18,6;UBERON:0004733,1.30e-17,12;UBERON:0002028,1.30e-17,12;UBERON:0007277,1.30e-17,12;UBERON:0002298,7.30e-17,6;UBERON:0000349,3.35e-16,5;UBERON:0000483,1.44e-15,306;UBERON:0001871,1.91e-15,6;UBERON:0000119,2.74e-15,309;UBERON:0001872,5.28e-15,5;UBERON:0002021,5.43e-15,5;UBERON:0000369,4.31e-13,4;UBERON:0002435,4.31e-13,4;UBERON:0000204,4.31e-13,4;UBERON:0010082,4.31e-13,4;UBERON:0002784,1.71e-11,4;UBERON:0002680,7.11e-11,9;UBERON:0001895,7.11e-11,9;UBERON:0010092,7.11e-11,9;UBERON:0005383,3.17e-10,3;UBERON:0005382,3.17e-10,3;UBERON:0001894,3.61e-10,7;UBERON:0006222,3.61e-10,7;UBERON:0001870,7.76e-10,3;UBERON:0000988,1.92e-09,3;UBERON:0002240,3.59e-09,3;UBERON:0005174,3.59e-09,3;UBERON:0001137,3.59e-09,3;UBERON:0001896,4.02e-09,3;UBERON:0005290,4.02e-09,3;UBERON:0010096,4.02e-09,3;UBERON:0000923,7.18e-08,560;UBERON:0010316,7.18e-08,560;UBERON:0005291,7.18e-08,560;UBERON:0006598,7.18e-08,560;UBERON:0010317,7.18e-08,560;UBERON:0002532,7.18e-08,560;UBERON:0002050,1.04e-07,564;UBERON:0001954,1.53e-07,2;UBERON:0003022,1.53e-07,2;UBERON:0002421,1.53e-07,2;UBERON:0002600,1.53e-07,2;UBERON:0001876,1.79e-07,2;UBERON:0001873,2.74e-07,2;UBERON:0010122,2.74e-07,2;UBERON:0000922,3.54e-07,592;UBERON:0002771,3.60e-07,2;UBERON:0002702,4.70e-07,2;UBERON:0005423,4.76e-07,581;UBERON:0002148,6.32e-07,2;UBERON:0006331,6.32e-07,2;UBERON:0009662,6.32e-07,2;UBERON:0001897,7.10e-07,2;UBERON:0010225,7.10e-07,2;UBERON:0001875,9.23e-07,2;UBERON:0006514,9.23e-07,2 | |||
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| ||
|short_description=p3@SLC1A2 | |||
}} | }} |
Latest revision as of 20:45, 17 September 2015
Short description: | p3@SLC1A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SLC1A2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 134bp_to_NM_004171, uc001mwd.2, uc010rev.1_5end |
EntrezGene: | SLC1A2 |
HGNC: | 10940 |
UniProt: | P43004 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 3.71e-08 | 8 |