FFCP PHASE1:Hg19::chr5:36608318..36608354,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6507 | |EntrezGene=6507 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10941 | |HGNC=10941 | ||
|TSSclassifier=strong | |||
|UniProt=E7EUV6 | |UniProt=E7EUV6 | ||
|association_with_transcript=38bp_to_ENST00000513646_5end | |association_with_transcript=38bp_to_ENST00000513646_5end | ||
|cluster_id=chr5:36608318..36608354,+ | |||
|coexpression_cluster_id=C1961 | |||
|description=CAGE_peak_2_at_SLC1A3_5end | |description=CAGE_peak_2_at_SLC1A3_5end | ||
|id=chr5:36608318..36608354,+ | |id=chr5:36608318..36608354,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002605;1.92e-10;3!CL:0002619;2.05e-10;3!CL:0000047;1.24e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,2.16e-10,3;CL:0002619,2.63e-10,3;CL:0000047,4.21e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.28e-20;82!UBERON:0006215;5.43e-12;3!UBERON:0006241;1.92e-10;3!UBERON:0003057;1.92e-10;3!UBERON:0010122;5.03e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001893;8.01e-74;34!UBERON:0003528;1.20e-72;34!UBERON:0002020;1.20e-72;34!UBERON:0001869;3.14e-71;32!UBERON:0002791;4.36e-71;32!UBERON:0000073;2.51e-59;53!UBERON:0002616;2.51e-59;53!UBERON:0002780;6.34e-59;41!UBERON:0001890;6.34e-59;41!UBERON:0000956;1.39e-57;25!UBERON:0000203;1.39e-57;25!UBERON:0002619;7.47e-49;22!UBERON:0001950;1.65e-42;20!UBERON:0001017;5.96e-40;75!UBERON:0000955;3.89e-39;68!UBERON:0001016;8.41e-35;83!UBERON:0000125;8.18e-29;9!UBERON:0002308;8.18e-29;9!UBERON:0002420;1.28e-28;9!UBERON:0007245;1.28e-28;9!UBERON:0010009;1.28e-28;9!UBERON:0010011;1.28e-28;9!UBERON:0000454;1.28e-28;9!UBERON:0004733;1.62e-22;12!UBERON:0002028;1.62e-22;12!UBERON:0009663;2.42e-22;7!UBERON:0004732;1.21e-20;13!UBERON:0002298;2.17e-20;6!UBERON:0000200;1.28e-19;6!UBERON:0000349;1.04e-17;5!UBERON:0007023;7.05e-15;114!UBERON:0000369;2.31e-14;4!UBERON:0002435;2.31e-14;4!UBERON:0000204;2.31e-14;4!UBERON:0002680;8.02e-14;9!UBERON:0001895;8.02e-14;9!UBERON:0011216;5.46e-13;132!UBERON:0001871;3.34e-12;6!UBERON:0001896;2.92e-11;3!UBERON:0005290;2.92e-11;3!UBERON:0005383;3.35e-11;3!UBERON:0005382;3.35e-11;3!UBERON:0001870;4.25e-11;3!UBERON:0002021;7.14e-11;5!UBERON:0000988;7.32e-11;3!UBERON:0001872;1.08e-10;5!UBERON:0002240;1.92e-10;3!UBERON:0005174;1.92e-10;3!UBERON:0001137;1.92e-10;3!UBERON:0001954;2.93e-08;2!UBERON:0003022;2.93e-08;2!UBERON:0002421;2.93e-08;2!UBERON:0002600;2.93e-08;2!UBERON:0002148;3.43e-08;2!UBERON:0006331;3.43e-08;2!UBERON:0009662;3.43e-08;2!UBERON:0001873;5.03e-08;2!UBERON:0001876;5.49e-08;2!UBERON:0002771;9.33e-08;2!UBERON:0001897;9.33e-08;2!UBERON:0002702;9.33e-08;2!UBERON:0010225;9.33e-08;2!UBERON:0010314;1.62e-07;132!UBERON:0001875;4.85e-07;2!UBERON:0006514;4.85e-07;2 | |||
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|short_description=p2@SLC1A3 | |short_description=p2@SLC1A3 | ||
}} | }} |
Latest revision as of 19:21, 17 September 2015
Short description: | p2@SLC1A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC1A3_5end |
Coexpression cluster: | C1961_Neural_cerebellum_medulla_mesothelioma_hippocampus_spinal_Astrocyte |
Association with transcript: | 38bp_to_ENST00000513646_5end |
EntrezGene: | SLC1A3 |
HGNC: | 10941 |
UniProt: | E7EUV6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 2.16e-10 | 3 |
adult endothelial progenitor cell | 2.63e-10 | 3 |
neuronal stem cell | 4.21e-07 | 8 |