FFCP PHASE1:Hg19::chr19:38423275..38423287,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23094 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23801 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=291bp_to_ENST00000476317_5end | |||
|cluster_id=chr19:38423275..38423287,+ | |||
|coexpression_cluster_id=C3782 | |||
|description=CAGE_peak_8_at_SIPA1L3_5end | |||
|id=chr19:38423275..38423287,+ | |||
|ontology_enrichment_celltype=CL:0000066!8.98e-12!254;CL:0002076!2.95e-08!43;CL:0000223!2.29e-07!59;CL:0002251!6.06e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0001014;4.84e-18;2!CL:0001016;4.84e-18;2!CL:0000453;9.43e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,5.75e-18,2;CL:0001016,5.75e-18,2;CL:0000453,1.01e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006242;1.68e-09;1!UBERON:0008425;1.68e-09;1 | |||
|ontology_enrichment_disease=DOID:305!5.32e-18!106;DOID:299!4.64e-12!25;DOID:0050687!1.86e-10!143;DOID:0050615!7.45e-08!16 | |||
|ontology_enrichment_disease_v019=DOID:0050619;1.68e-09;1!DOID:1357;1.68e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,2.46e-09,1;DOID:1357,2.46e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0001007!4.19e-19!155;UBERON:0001555!4.19e-19!155;UBERON:0007026!4.19e-19!155;UBERON:0004119!3.46e-17!169;UBERON:0000925!3.46e-17!169;UBERON:0006595!3.46e-17!169;UBERON:0004921!9.48e-16!129;UBERON:0004185!9.48e-16!129;UBERON:0005911!6.77e-12!82;UBERON:0000077!1.20e-10!130;UBERON:0005409!1.25e-10!35;UBERON:0000466!1.73e-10!126;UBERON:0000464!6.08e-10!104;UBERON:0002294!7.33e-10!7;UBERON:0001173!7.33e-10!7;UBERON:0004912!7.33e-10!7;UBERON:0000160!1.44e-09!27;UBERON:0000058!2.61e-09!26;UBERON:0005177!9.65e-09!107;UBERON:0000344!1.44e-08!12;UBERON:0000481!2.23e-08!347;UBERON:0005153!1.50e-07!37;UBERON:0003929!1.90e-07!54;UBERON:0001041!3.38e-07!98;UBERON:0001004!3.87e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;7.65e-29;17!UBERON:0002108;1.72e-27;4!UBERON:0005409;2.31e-22;22!UBERON:0004921;7.45e-14;33!UBERON:0002114;3.28e-12;2!UBERON:0002294;1.84e-11;7!UBERON:0001173;1.84e-11;7!UBERON:0004913;4.46e-10;1!UBERON:0003703;4.46e-10;1!UBERON:0001174;4.46e-10;1!UBERON:0004914;4.46e-10;1!UBERON:0002394;1.42e-09;4!UBERON:0003928;1.42e-09;4!UBERON:0001764;1.68e-09;1!UBERON:0001825;1.68e-09;1!UBERON:0001155;7.64e-09;9!UBERON:0000059;2.54e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.26e-29,17;UBERON:0002108,2.19e-27,4;UBERON:0005409,9.98e-20,25;UBERON:0002114,3.37e-12,2;UBERON:0004913,4.46e-10,1;UBERON:0003703,4.46e-10,1;UBERON:0001174,4.46e-10,1;UBERON:0004914,4.46e-10,1;UBERON:0001764,2.46e-09,1;UBERON:0001825,2.46e-09,1;UBERON:0002294,5.37e-09,9;UBERON:0001173,5.37e-09,9;UBERON:0004912,5.37e-09,9;UBERON:0001155,6.33e-09,9;UBERON:0000059,2.18e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0.410623275218653,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0.121973706129595,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.45976877086227,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93375119346596,0.40101294060657,0,0,0,0,2.25599806453706,0.308061348417659,0.784349769176855,0,0.105551628892876,0,0,0,0,0,0,1.01950509218015,0,0.223874754722178,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0.828851746593443,0.503865495708552,0.920418142519393,0,0,2.15684042753584,0.358042349351218,0,0.0986434056369336,0,0,0,0,0,0,1.13697999995054,0,0.341380344856499,0.508507300585533,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.652931232636591,0.706765357169704,0,2.98578579323551,1.85760885457012,1.22206028986725,0,0,0,0,0,0,0,0.19566461893209,0,0.789168805698781,2.41981432097328,0,0,0,0,0,0,0.627865836814451,0,0.284609546029793,0,0,0.195984794828755,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0,0.391102765469606,0.320635281006135,1.70762395791482,0,0.432271251462318,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0.492137407573744,0,0,0,0,0,0,2.249738915515,2.32140586367385,0,0,0.394028536495991,0.524545881349981,0,0,0,0,0,0,0,0,0,1.19730191562487,0,0,0,0.293104467356165,0,0,0,0.513260513652988,0.704815022316672,0.854299300541557,0,0.414239055347196,0,0,0.121792598380896,0.638341257770182,0,0,0,0,1.09937867375164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71553273099941,0.260994291965212,0.226705925512272,0,0,0.537266523244462,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0,0.550285795565037,0.231051332300676,0,0,0,0.150420656698515,0,0,0,0,3.99211432786022,0,0,0,0,0,0.548257766857182,0,0,0.511049710558381,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0.156986185701028,0,0,0,0,0,0.142953088353313,0.158013611732727,0,0,0,0,0,0,0.430227358820278,0,0,0,2.97838929107265,0,0,0.447421727191169,0.98150233615243,1.82876887473404,0,0,0,0,1.63757624423474,0,0.118920090777569,0,0,0.754814217833368,4.09023037972107,2.18559560503957,6.1141248526998,0,0,0,0,0,0,0,0,0,0,0,0.561689566824178,0.730336388246517,0,0,0,0,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0.476128862927481,0.129177819672012,0,0,0.572824424503484,0.404234377916439,0,0,0.134704106029175,0.860666464712116,0.332660356546013,0.488419611665847,0,0,0.628776414746108,0,0,0,0,0,0 | |||
|short_description=p8@SIPA1L3 | |||
}} |
Latest revision as of 18:40, 17 September 2015
Short description: | p8@SIPA1L3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SIPA1L3_5end |
Coexpression cluster: | C3782_small_papillotubular_smallcell_Intestinal_immature_bile_colon |
Association with transcript: | 291bp_to_ENST00000476317_5end |
EntrezGene: | SIPA1L3 |
HGNC: | 23801 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 5.75e-18 | 2 |
immature CD1a-positive Langerhans cell | 5.75e-18 | 2 |
Langerhans cell | 1.01e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
intestine | 6.26e-29 | 17 |
small intestine | 2.19e-27 | 4 |
gastrointestinal system | 9.98e-20 | 25 |
duodenum | 3.37e-12 | 2 |
hepatopancreatic ampulla | 4.46e-10 | 1 |
extrahepatic bile duct | 4.46e-10 | 1 |
common bile duct | 4.46e-10 | 1 |
duodenal papilla | 4.46e-10 | 1 |
maxillary sinus | 2.46e-09 | 1 |
paranasal sinus | 2.46e-09 | 1 |
biliary system | 5.37e-09 | 9 |
biliary tree | 5.37e-09 | 9 |
biliary bud | 5.37e-09 | 9 |
colon | 6.33e-09 | 9 |
large intestine | 2.18e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 2.46e-09 | 1 |
maxillary sinus cancer | 2.46e-09 | 1 |