FFCP PHASE1:Hg19::chr1:35247859..35247901,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2707 | |EntrezGene=2707 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4285 | |HGNC=4285 | ||
|TSSclassifier=strong | |||
|UniProt=O75712 | |UniProt=O75712 | ||
|association_with_transcript=0bp_to_ENST00000373362_5end | |association_with_transcript=0bp_to_ENST00000373362_5end | ||
|cluster_id=chr1:35247859..35247901,+ | |||
|coexpression_cluster_id=C511 | |coexpression_cluster_id=C511 | ||
|description=CAGE_peak_5_at_GJB3_5end | |description=CAGE_peak_5_at_GJB3_5end | ||
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|ontology_enrichment_celltype=CL:0000066!3.39e-29!254;CL:0002076!3.12e-26!43;CL:0000223!5.76e-19!59;CL:0002251!5.44e-16!21;CL:0002368!2.21e-12!13;CL:0002159!8.21e-11!13;CL:0002202!9.82e-08!9;CL:0002632!9.82e-08!9;CL:0000622!1.56e-07!5;CL:0000244!3.50e-07!4;CL:0000731!3.50e-07!4 | |ontology_enrichment_celltype=CL:0000066!3.39e-29!254;CL:0002076!3.12e-26!43;CL:0000223!5.76e-19!59;CL:0002251!5.44e-16!21;CL:0002368!2.21e-12!13;CL:0002159!8.21e-11!13;CL:0002202!9.82e-08!9;CL:0002632!9.82e-08!9;CL:0000622!1.56e-07!5;CL:0000244!3.50e-07!4;CL:0000731!3.50e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.28e-23;42!CL:0002368;1.27e-18;13!CL:0002251;3.51e-18;20!CL:0002159;4.79e-15;14!CL:0000349;4.49e-14;19!CL:0002202;1.87e-11;9!CL:0002632;1.87e-11;9!CL:0000622;9.70e-11;5!CL:0000244;3.28e-10;4!CL:0000731;3.28e-10;4!CL:0000154;6.94e-09;6!CL:0002577;1.22e-08;3!CL:0002541;4.69e-08;3!CL:0002621;6.49e-08;3!CL:0002328;8.27e-08;3!CL:0002166;1.60e-07;3!CL:0000307;2.31e-07;3!CL:0002623;6.35e-07;3 | |ontology_enrichment_celltype_v019=CL:0002076;1.28e-23;42!CL:0002368;1.27e-18;13!CL:0002251;3.51e-18;20!CL:0002159;4.79e-15;14!CL:0000349;4.49e-14;19!CL:0002202;1.87e-11;9!CL:0002632;1.87e-11;9!CL:0000622;9.70e-11;5!CL:0000244;3.28e-10;4!CL:0000731;3.28e-10;4!CL:0000154;6.94e-09;6!CL:0002577;1.22e-08;3!CL:0002541;4.69e-08;3!CL:0002621;6.49e-08;3!CL:0002328;8.27e-08;3!CL:0002166;1.60e-07;3!CL:0000307;2.31e-07;3!CL:0002623;6.35e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002076,5.55e-31,42;CL:0000066,1.69e-27,253;CL:0000223,3.98e-22,58;CL:0002368,1.40e-18,13;CL:0002251,4.28e-18,20;CL:0002159,4.99e-15,14;CL:0000349,4.56e-14,19;CL:0002202,1.94e-11,9;CL:0002632,1.94e-11,9;CL:0000622,1.07e-10,5;CL:0000244,3.64e-10,4;CL:0000731,3.64e-10,4;CL:0000076,9.96e-10,63;CL:0000154,7.51e-09,6;CL:0002577,1.19e-08,3;CL:0002541,4.97e-08,3;CL:0002621,6.27e-08,3;CL:0002328,9.07e-08,3;CL:0002166,1.63e-07,3;CL:0002077,2.46e-07,34;CL:0000068,2.50e-07,3;CL:0000069,2.50e-07,3;CL:0000307,2.50e-07,3;CL:0000377,2.50e-07,3;CL:0002623,6.49e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000223;3.19e-12;58!CL:0000377;2.31e-07;3 | |ontology_enrichment_development_v019=CL:0000223;3.19e-12;58!CL:0000377;2.31e-07;3 | ||
|ontology_enrichment_disease=DOID:1749!8.24e-15!14;DOID:305!5.58e-12!106 | |ontology_enrichment_disease=DOID:1749!8.24e-15!14;DOID:305!5.58e-12!106 | ||
|ontology_enrichment_disease_v019=DOID:1749;3.95e-22;14 | |ontology_enrichment_disease_v019=DOID:1749;3.95e-22;14 | ||
|ontology_enrichment_disease_v019_2=DOID:1749,4.44e-22,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.52e-26!169;UBERON:0000925!2.52e-26!169;UBERON:0006595!2.52e-26!169;UBERON:0001007!1.80e-17!155;UBERON:0001555!1.80e-17!155;UBERON:0007026!1.80e-17!155;UBERON:0001004!3.52e-16!72;UBERON:0000077!4.04e-16!130;UBERON:0005631!1.41e-15!14;UBERON:0000158!1.41e-15!14;UBERON:0000161!4.34e-15!35;UBERON:0004921!3.41e-13!129;UBERON:0004185!3.41e-13!129;UBERON:0000065!1.50e-11!53;UBERON:0003124!2.34e-11!7;UBERON:0000166!1.02e-10!21;UBERON:0005911!1.86e-10!82;UBERON:0005153!8.03e-10!37;UBERON:0000478!5.80e-09!24;UBERON:0001041!9.06e-09!98;UBERON:0000072!1.33e-08!46;UBERON:0000064!2.21e-08!219;UBERON:0000165!2.23e-08!28;UBERON:0000930!2.23e-08!28;UBERON:0005157!2.28e-08!51;UBERON:0000344!2.39e-08!12;UBERON:0000062!2.89e-08!511;UBERON:0000365!2.98e-08!5;UBERON:0005178!4.87e-08!34;UBERON:0002224!4.87e-08!34;UBERON:0000464!9.09e-08!104;UBERON:0005181!1.11e-07!35;UBERON:0003729!1.77e-07!5;UBERON:0003102!2.43e-07!95;UBERON:0001987!3.34e-07!4;UBERON:0004340!3.34e-07!4;UBERON:0006554!3.62e-07!44;UBERON:0007196!3.77e-07!14;UBERON:0001558!3.77e-07!14;UBERON:0008947!4.95e-07!38;UBERON:0003258!4.95e-07!38;UBERON:0001008!6.74e-07!45;UBERON:0000468!8.99e-07!659;UBERON:0005910!9.46e-07!6 | |ontology_enrichment_uberon=UBERON:0004119!2.52e-26!169;UBERON:0000925!2.52e-26!169;UBERON:0006595!2.52e-26!169;UBERON:0001007!1.80e-17!155;UBERON:0001555!1.80e-17!155;UBERON:0007026!1.80e-17!155;UBERON:0001004!3.52e-16!72;UBERON:0000077!4.04e-16!130;UBERON:0005631!1.41e-15!14;UBERON:0000158!1.41e-15!14;UBERON:0000161!4.34e-15!35;UBERON:0004921!3.41e-13!129;UBERON:0004185!3.41e-13!129;UBERON:0000065!1.50e-11!53;UBERON:0003124!2.34e-11!7;UBERON:0000166!1.02e-10!21;UBERON:0005911!1.86e-10!82;UBERON:0005153!8.03e-10!37;UBERON:0000478!5.80e-09!24;UBERON:0001041!9.06e-09!98;UBERON:0000072!1.33e-08!46;UBERON:0000064!2.21e-08!219;UBERON:0000165!2.23e-08!28;UBERON:0000930!2.23e-08!28;UBERON:0005157!2.28e-08!51;UBERON:0000344!2.39e-08!12;UBERON:0000062!2.89e-08!511;UBERON:0000365!2.98e-08!5;UBERON:0005178!4.87e-08!34;UBERON:0002224!4.87e-08!34;UBERON:0000464!9.09e-08!104;UBERON:0005181!1.11e-07!35;UBERON:0003729!1.77e-07!5;UBERON:0003102!2.43e-07!95;UBERON:0001987!3.34e-07!4;UBERON:0004340!3.34e-07!4;UBERON:0006554!3.62e-07!44;UBERON:0007196!3.77e-07!14;UBERON:0001558!3.77e-07!14;UBERON:0008947!4.95e-07!38;UBERON:0003258!4.95e-07!38;UBERON:0001008!6.74e-07!45;UBERON:0000468!8.99e-07!659;UBERON:0005910!9.46e-07!6 | ||
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| ||
|short_description=p5@GJB3 | |short_description=p5@GJB3 | ||
}} | }} |
Latest revision as of 17:52, 17 September 2015
Short description: | p5@GJB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GJB3_5end |
Coexpression cluster: | C511_Placental_Alveolar_Bronchial_amniotic_Gingival_Corneal_Mammary |
Association with transcript: | 0bp_to_ENST00000373362_5end |
EntrezGene: | GJB3 |
HGNC: | 4285 |
UniProt: | O75712 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 5.55e-31 | 42 |
epithelial cell | 1.69e-27 | 253 |
endodermal cell | 3.98e-22 | 58 |
respiratory epithelial cell | 1.40e-18 | 13 |
epithelial cell of alimentary canal | 4.28e-18 | 20 |
general ecto-epithelial cell | 4.99e-15 | 14 |
extraembryonic cell | 4.56e-14 | 19 |
epithelial cell of tracheobronchial tree | 1.94e-11 | 9 |
epithelial cell of lower respiratory tract | 1.94e-11 | 9 |
acinar cell | 1.07e-10 | 5 |
transitional epithelial cell | 3.64e-10 | 4 |
urothelial cell | 3.64e-10 | 4 |
squamous epithelial cell | 9.96e-10 | 63 |
protein secreting cell | 7.51e-09 | 6 |
placental epithelial cell | 1.19e-08 | 3 |
chorionic membrane mesenchymal stem cell | 4.97e-08 | 3 |
gingival epithelial cell | 6.27e-08 | 3 |
bronchial epithelial cell | 9.07e-08 | 3 |
epithelial cell of Malassez | 1.63e-07 | 3 |
ecto-epithelial cell | 2.46e-07 | 34 |
duct epithelial cell | 2.50e-07 | 3 |
branched duct epithelial cell | 2.50e-07 | 3 |
tracheal epithelial cell | 2.50e-07 | 3 |
tracheoblast | 2.50e-07 | 3 |
acinar cell of salivary gland | 6.49e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 4.44e-22 | 14 |