FFCP PHASE1:Hg19::chr12:1929724..1929757,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=654429 | |EntrezGene=654429 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32443 | |HGNC=32443 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000539859,ENST00000540378,ENST00000544489_5end | |association_with_transcript=0bp_to_ENST00000539859,ENST00000540378,ENST00000544489_5end | ||
|cluster_id=chr12:1929724..1929757,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_LRTM2_5end | |description=CAGE_peak_1_at_LRTM2_5end | ||
|id=chr12:1929724..1929757,+ | |id=chr12:1929724..1929757,+ | ||
|ontology_enrichment_celltype=CL:0000047!3.82e-07!8 | |ontology_enrichment_celltype=CL:0000047!3.82e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000540;5.77e-07;6!CL:0000404;5.77e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,9.33e-09,8;CL:0000540,5.71e-07,6;CL:0000031,5.71e-07,6;CL:0000404,5.71e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.57e-14;82!UBERON:0010122;4.98e-10;2!CL:0000031;5.77e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p1@LRTM2 | |short_description=p1@LRTM2 | ||
}} | }} |
Latest revision as of 17:51, 17 September 2015
Short description: | p1@LRTM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LRTM2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000539859, ENST00000540378, ENST00000544489_5end |
EntrezGene: | LRTM2 |
HGNC: | 32443 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 9.33e-09 | 8 |
neuron | 5.71e-07 | 6 |
neuroblast | 5.71e-07 | 6 |
electrically signaling cell | 5.71e-07 | 6 |