FFCP PHASE1:Hg19::chr10:25351253..25351258,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=219670 | |EntrezGene=219670 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=28388 | |HGNC=28388 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-45bp_to_uc001ish.1_5end | |association_with_transcript=-45bp_to_uc001ish.1_5end | ||
|cluster_id=chr10:25351253..25351258,- | |||
|coexpression_cluster_id=C50 | |coexpression_cluster_id=C50 | ||
|description=CAGE_peak_3_at_ENKUR_5end | |description=CAGE_peak_3_at_ENKUR_5end | ||
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|ontology_enrichment_celltype=CL:0000066!3.05e-12!254;CL:0002139!3.36e-12!24;CL:0000076!5.34e-11!62;CL:0000213!4.19e-09!57;CL:0000215!4.19e-09!57;CL:0000071!6.57e-08!18;CL:0002546!6.57e-08!18;CL:0002078!3.31e-07!44;CL:0000115!6.25e-07!35 | |ontology_enrichment_celltype=CL:0000066!3.05e-12!254;CL:0002139!3.36e-12!24;CL:0000076!5.34e-11!62;CL:0000213!4.19e-09!57;CL:0000215!4.19e-09!57;CL:0000071!6.57e-08!18;CL:0002546!6.57e-08!18;CL:0002078!3.31e-07!44;CL:0000115!6.25e-07!35 | ||
|ontology_enrichment_celltype_v019=CL:0002541;4.33e-21;3!CL:0002144;1.11e-09;3!CL:0000349;1.29e-08;19!CL:0000222;1.14e-07;1 | |ontology_enrichment_celltype_v019=CL:0002541;4.33e-21;3!CL:0002144;1.11e-09;3!CL:0000349;1.29e-08;19!CL:0000222;1.14e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002541,3.80e-21,3;CL:0002144,1.26e-09,3;CL:0000349,1.24e-08,19 | |||
|ontology_enrichment_development_v019=UBERON:0010115;5.33e-08;1!UBERON:0001045;1.14e-07;1!UBERON:0003124;1.14e-07;1 | |ontology_enrichment_development_v019=UBERON:0010115;5.33e-08;1!UBERON:0001045;1.14e-07;1!UBERON:0003124;1.14e-07;1 | ||
|ontology_enrichment_disease=DOID:305!1.56e-07!106 | |ontology_enrichment_disease=DOID:305!1.56e-07!106 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!6.57e-08!18;UBERON:0004638!6.57e-08!18;UBERON:0004852!6.57e-08!18;UBERON:0000055!1.34e-07!69;UBERON:0004923!2.66e-07!57;UBERON:0002049!6.59e-07!79;UBERON:0007798!6.59e-07!79;UBERON:0003914!8.24e-07!118 | |ontology_enrichment_uberon=UBERON:0001986!6.57e-08!18;UBERON:0004638!6.57e-08!18;UBERON:0004852!6.57e-08!18;UBERON:0000055!1.34e-07!69;UBERON:0004923!2.66e-07!57;UBERON:0002049!6.59e-07!79;UBERON:0007798!6.59e-07!79;UBERON:0003914!8.24e-07!118 | ||
|ontology_enrichment_uberon_v019=UBERON:0002108;1.08e-21;4!UBERON:0003124;4.33e-21;3!UBERON:0000920;4.33e-21;3!UBERON:0000160;1.19e-12;17!UBERON:0005631;6.53e-11;10!UBERON:0000158;6.53e-11;10!UBERON:0005409;8.76e-10;22!UBERON:0010523;1.11e-09;3!UBERON:0001915;1.11e-09;3!UBERON:0002114;1.11e-09;2!UBERON:0001982;1.11e-09;3!UBERON:0000478;2.03e-09;24!UBERON:0002363;5.33e-08;1!UBERON:0001154;1.14e-07;1!UBERON:0002134;1.14e-07;1!UBERON:0001153;1.14e-07;1!UBERON:0004913;1.14e-07;1!UBERON:0009854;1.14e-07;1!UBERON:0003703;1.14e-07;1!UBERON:0005208;1.14e-07;1!UBERON:0004145;1.14e-07;1!UBERON:0005946;1.14e-07;1!UBERON:0005965;1.14e-07;1!UBERON:0001174;1.14e-07;1!UBERON:0004914;1.14e-07;1!UBERON:0002078;1.14e-07;1!UBERON:0004921;1.61e-07;33 | |ontology_enrichment_uberon_v019=UBERON:0002108;1.08e-21;4!UBERON:0003124;4.33e-21;3!UBERON:0000920;4.33e-21;3!UBERON:0000160;1.19e-12;17!UBERON:0005631;6.53e-11;10!UBERON:0000158;6.53e-11;10!UBERON:0005409;8.76e-10;22!UBERON:0010523;1.11e-09;3!UBERON:0001915;1.11e-09;3!UBERON:0002114;1.11e-09;2!UBERON:0001982;1.11e-09;3!UBERON:0000478;2.03e-09;24!UBERON:0002363;5.33e-08;1!UBERON:0001154;1.14e-07;1!UBERON:0002134;1.14e-07;1!UBERON:0001153;1.14e-07;1!UBERON:0004913;1.14e-07;1!UBERON:0009854;1.14e-07;1!UBERON:0003703;1.14e-07;1!UBERON:0005208;1.14e-07;1!UBERON:0004145;1.14e-07;1!UBERON:0005946;1.14e-07;1!UBERON:0005965;1.14e-07;1!UBERON:0001174;1.14e-07;1!UBERON:0004914;1.14e-07;1!UBERON:0002078;1.14e-07;1!UBERON:0004921;1.61e-07;33 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,7.51e-22,4;UBERON:0000920,3.80e-21,3;UBERON:0003124,1.74e-15,7;UBERON:0000160,9.06e-13,17;UBERON:0005631,1.18e-11,14;UBERON:0000158,1.18e-11,14;UBERON:0002114,8.16e-10,2;UBERON:0010523,1.26e-09,3;UBERON:0001915,1.26e-09,3;UBERON:0001982,1.26e-09,3;UBERON:0000478,2.09e-09,24;UBERON:0005409,1.14e-08,25;UBERON:0002363,5.33e-08,1;UBERON:0007645,5.33e-08,1;UBERON:0007647,5.33e-08,1;UBERON:0010115,5.33e-08,1;UBERON:0004913,6.97e-08,1;UBERON:0003703,6.97e-08,1;UBERON:0001174,6.97e-08,1;UBERON:0004914,6.97e-08,1;UBERON:0002134,9.10e-08,1;UBERON:0005208,9.10e-08,1;UBERON:0005946,9.10e-08,1;UBERON:0005965,9.10e-08,1;UBERON:0002078,9.10e-08,1;UBERON:0001154,1.18e-07,1;UBERON:0001153,1.18e-07,1;UBERON:0001045,1.18e-07,1 | |||
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| ||
|short_description=p3@ENKUR | |short_description=p3@ENKUR | ||
}} | }} |
Latest revision as of 17:12, 17 September 2015
Short description: | p3@ENKUR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENKUR_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | -45bp_to_uc001ish.1_5end |
EntrezGene: | ENKUR |
HGNC: | 28388 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 3.80e-21 | 3 |
capillary endothelial cell | 1.26e-09 | 3 |
extraembryonic cell | 1.24e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
small intestine | 7.51e-22 | 4 |
egg chorion | 3.80e-21 | 3 |
chorion | 1.74e-15 | 7 |
intestine | 9.06e-13 | 17 |
extraembryonic membrane | 1.18e-11 | 14 |
membranous layer | 1.18e-11 | 14 |
duodenum | 8.16e-10 | 2 |
microcirculatory vessel | 1.26e-09 | 3 |
endothelium of capillary | 1.26e-09 | 3 |
capillary | 1.26e-09 | 3 |
extraembryonic structure | 2.09e-09 | 24 |
gastrointestinal system | 1.14e-08 | 25 |
dura mater | 5.33e-08 | 1 |
future meninx | 5.33e-08 | 1 |
ectomeninx | 5.33e-08 | 1 |
future dura mater | 5.33e-08 | 1 |
hepatopancreatic ampulla | 6.97e-08 | 1 |
extrahepatic bile duct | 6.97e-08 | 1 |
common bile duct | 6.97e-08 | 1 |
duodenal papilla | 6.97e-08 | 1 |
tricuspid valve | 9.10e-08 | 1 |
right atrium valve | 9.10e-08 | 1 |
outflow tract of atrium | 9.10e-08 | 1 |
outflow part of right atrium | 9.10e-08 | 1 |
right cardiac atrium | 9.10e-08 | 1 |
vermiform appendix | 1.18e-07 | 1 |
caecum | 1.18e-07 | 1 |
midgut | 1.18e-07 | 1 |