FFCP PHASE1:Hg19::chr10:25351253..25351258,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=219670 | |EntrezGene=219670 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=28388 | |HGNC=28388 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-45bp_to_uc001ish.1_5end | |association_with_transcript=-45bp_to_uc001ish.1_5end | ||
|cluster_id=chr10:25351253..25351258,- | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_3_at_ENKUR_5end | |description=CAGE_peak_3_at_ENKUR_5end | ||
|id=chr10:25351253..25351258,- | |id=chr10:25351253..25351258,- | ||
|ontology_enrichment_celltype=CL:0000066!3.05e-12!254;CL:0002139!3.36e-12!24;CL:0000076!5.34e-11!62;CL:0000213!4.19e-09!57;CL:0000215!4.19e-09!57;CL:0000071!6.57e-08!18;CL:0002546!6.57e-08!18;CL:0002078!3.31e-07!44;CL:0000115!6.25e-07!35 | |ontology_enrichment_celltype=CL:0000066!3.05e-12!254;CL:0002139!3.36e-12!24;CL:0000076!5.34e-11!62;CL:0000213!4.19e-09!57;CL:0000215!4.19e-09!57;CL:0000071!6.57e-08!18;CL:0002546!6.57e-08!18;CL:0002078!3.31e-07!44;CL:0000115!6.25e-07!35 | ||
|ontology_enrichment_celltype_v019=CL:0002541;4.33e-21;3!CL:0002144;1.11e-09;3!CL:0000349;1.29e-08;19!CL:0000222;1.14e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,3.80e-21,3;CL:0002144,1.26e-09,3;CL:0000349,1.24e-08,19 | |||
|ontology_enrichment_development_v019=UBERON:0010115;5.33e-08;1!UBERON:0001045;1.14e-07;1!UBERON:0003124;1.14e-07;1 | |||
|ontology_enrichment_disease=DOID:305!1.56e-07!106 | |ontology_enrichment_disease=DOID:305!1.56e-07!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!6.57e-08!18;UBERON:0004638!6.57e-08!18;UBERON:0004852!6.57e-08!18;UBERON:0000055!1.34e-07!69;UBERON:0004923!2.66e-07!57;UBERON:0002049!6.59e-07!79;UBERON:0007798!6.59e-07!79;UBERON:0003914!8.24e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;1.08e-21;4!UBERON:0003124;4.33e-21;3!UBERON:0000920;4.33e-21;3!UBERON:0000160;1.19e-12;17!UBERON:0005631;6.53e-11;10!UBERON:0000158;6.53e-11;10!UBERON:0005409;8.76e-10;22!UBERON:0010523;1.11e-09;3!UBERON:0001915;1.11e-09;3!UBERON:0002114;1.11e-09;2!UBERON:0001982;1.11e-09;3!UBERON:0000478;2.03e-09;24!UBERON:0002363;5.33e-08;1!UBERON:0001154;1.14e-07;1!UBERON:0002134;1.14e-07;1!UBERON:0001153;1.14e-07;1!UBERON:0004913;1.14e-07;1!UBERON:0009854;1.14e-07;1!UBERON:0003703;1.14e-07;1!UBERON:0005208;1.14e-07;1!UBERON:0004145;1.14e-07;1!UBERON:0005946;1.14e-07;1!UBERON:0005965;1.14e-07;1!UBERON:0001174;1.14e-07;1!UBERON:0004914;1.14e-07;1!UBERON:0002078;1.14e-07;1!UBERON:0004921;1.61e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,7.51e-22,4;UBERON:0000920,3.80e-21,3;UBERON:0003124,1.74e-15,7;UBERON:0000160,9.06e-13,17;UBERON:0005631,1.18e-11,14;UBERON:0000158,1.18e-11,14;UBERON:0002114,8.16e-10,2;UBERON:0010523,1.26e-09,3;UBERON:0001915,1.26e-09,3;UBERON:0001982,1.26e-09,3;UBERON:0000478,2.09e-09,24;UBERON:0005409,1.14e-08,25;UBERON:0002363,5.33e-08,1;UBERON:0007645,5.33e-08,1;UBERON:0007647,5.33e-08,1;UBERON:0010115,5.33e-08,1;UBERON:0004913,6.97e-08,1;UBERON:0003703,6.97e-08,1;UBERON:0001174,6.97e-08,1;UBERON:0004914,6.97e-08,1;UBERON:0002134,9.10e-08,1;UBERON:0005208,9.10e-08,1;UBERON:0005946,9.10e-08,1;UBERON:0005965,9.10e-08,1;UBERON:0002078,9.10e-08,1;UBERON:0001154,1.18e-07,1;UBERON:0001153,1.18e-07,1;UBERON:0001045,1.18e-07,1 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0.50133791063589,0.289693037921647,0,0,0.0945348171640679,0,0.175669571386252,0.0654895377488563,0,0,0,0,0,0,0,0,1.59009925893364,0,0.694281003215189,0,0.838998872419812,0.275118041940067,0,0.258416759169329,0,0.66944122552934,1.20848795132744,3.80136052859256,0,0.735326160691737,0.81014194788176,0.357198913136319,0,0.112611480483322,0,0,0.549605231791222,0,0,0,0,0.12663051166458,0,0,0.354668382198357,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,1.59884970106048,0,0,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,0.288732895522148,1.38895653772983,1.14152491340759,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29723871668228,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0.280660094433074,0.128139149255701,0.511707249066704,0,0,0,0,0,0,0,1.69203229428271,0.200506470303285,0,0,0,0,0,0,0,1.46139224653261,0.527758144464379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0.27470839445503,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0,1.14851441245126,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0.487426979262569,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0.282431402330337,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,1.43246690842614,0,0,0,0,0,0,0,0.19924798825107,1.38141957765574,0,0.409074730008619,0,0,0.179736702294654,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0.108647371922008,8.61303131276183,2.93112298885959,19.7222867126895,0,0,0,0,0,0,0,0,0,0.979396848954886,0.282706142867882,0,0,0.796118080530053,0,0,0,0,0,0,0,0,0.19566461893209,0,0,1.20990716048664,0,2.40109002588254,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.522355239482415,0,0.171986032471617,0,0.219267951258557,0.0821154570532092,0,0.0882561266915003,0,0,0,0,0.195551382734803,0.881747022766871,0,0.39961921916426,0,0,0,0,0,0.235694034616795,0,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0.558564802544508,0.229160424011684,1.43574604915363,0,0,0,0.0671834724867263,0.720599767084807,0,0.157566364614447,0.0824158583811665,0.202210631562555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05173127149315,0,0,0,0.171086837884329,0,0.106787412567695,0.157204305099666,0,0,0,0,0.638341257770182,0,0,0,0.327872630709804,0,0,0,0,0.573409195690071,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0.770479321629213,1.07220795687463,0,0,0,0.489473409012935,0.179088841081487,0.617602894321944,0.219284049578707,0,0,1.01365464391844,0,0.345430341731199,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0.196295437002051,0.235939446695481,0.183428598521679,0.231051332300676,0,0,0,0,0,0,0,0,1.6264169483875,0.0675375846183947,0,0,0,0,0,0,0,4.85497225030462,0,0,0.606965604236632,0,1.1531308121143,0,0.685952037749674,0,0,0,0,0,0,0.560544326627578,0.913158720509496,2.59113109462346,1.43325506366115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,5.94241017431174,9.61662066217412,0,0,0,0,0,0.4226557275834,0.169927114687817,0,0.0644578879735772,0,4.99951028095841,0.352894871715692,0,0,0,0,0,0,0,3.1741610430924,0,0.462175628631418,0,0,0,0,0,0.26721740526556,0.0918948995348449,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0.430333232356058,0.332660356546013,0.89543595472072,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0.50133791063589,0.289693037921647,0,0,0.0945348171640679,0,0.175669571386252,0.0654895377488563,0,0,0,0,0,0,0,0,1.59009925893364,0,0.694281003215189,0,0.838998872419812,0.275118041940067,0,0.258416759169329,0,0.66944122552934,1.20848795132744,3.80136052859256,0,0.735326160691737,0.81014194788176,0.357198913136319,0,0.112611480483322,0,0,0.549605231791222,0,0,0,0,0.12663051166458,0,0,0.354668382198357,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,1.59884970106048,0,0,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,0.288732895522148,1.38895653772983,1.14152491340759,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29723871668228,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0.280660094433074,0.128139149255701,0.511707249066704,0,0,0,0,0,0,0,1.69203229428271,0.200506470303285,0,0,0,0,0,0,0,1.46139224653261,0.527758144464379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0.27470839445503,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0,1.14851441245126,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0.487426979262569,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0.282431402330337,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,1.43246690842614,0,0,0,0,0,0,0,0.19924798825107,1.38141957765574,0,0.409074730008619,0,0,0.179736702294654,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0.108647371922008,8.61303131276183,2.93112298885959,19.7222867126895,0,0,0,0,0,0,0,0,0,0.979396848954886,0.282706142867882,0,0,0.796118080530053,0,0,0,0,0,0,0,0,0.19566461893209,0,0,1.20990716048664,0,2.40109002588254,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.522355239482415,0,0.171986032471617,0,0.219267951258557,0.0821154570532092,0,0.0882561266915003,0,0,0,0,0.195551382734803,0.881747022766871,0,0.39961921916426,0,0,0,0,0,0.235694034616795,0,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0.558564802544508,0.229160424011684,1.43574604915363,0,0,0,0.0671834724867263,0.720599767084807,0,0.157566364614447,0.0824158583811665,0.202210631562555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05173127149315,0,0,0,0.171086837884329,0,0.106787412567695,0.157204305099666,0,0,0,0,0.638341257770182,0,0,0,0.327872630709804,0,0,0,0,0.573409195690071,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0.770479321629213,1.07220795687463,0,0,0,0.489473409012935,0.179088841081487,0.617602894321944,0.219284049578707,0,0,1.01365464391844,0,0.345430341731199,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0.196295437002051,0.235939446695481,0.183428598521679,0.231051332300676,0,0,0,0,0,0,0,0,1.6264169483875,0.0675375846183947,0,0,0,0,0,0,0,4.85497225030462,0,0,0.606965604236632,0,1.1531308121143,0,0.685952037749674,0,0,0,0,0,0,0.560544326627578,0.913158720509496,2.59113109462346,1.43325506366115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,5.94241017431174,9.61662066217412,0,0,0,0,0,0.4226557275834,0.169927114687817,0,0.0644578879735772,0,4.99951028095841,0.352894871715692,0,0,0,0,0,0,0,3.1741610430924,0,0.462175628631418,0,0,0,0,0,0.26721740526556,0.0918948995348449,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0.430333232356058,0.332660356546013,0.89543595472072,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@ENKUR | |short_description=p3@ENKUR | ||
}} | }} |
Latest revision as of 17:12, 17 September 2015
Short description: | p3@ENKUR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENKUR_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | -45bp_to_uc001ish.1_5end |
EntrezGene: | ENKUR |
HGNC: | 28388 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 3.80e-21 | 3 |
capillary endothelial cell | 1.26e-09 | 3 |
extraembryonic cell | 1.24e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
small intestine | 7.51e-22 | 4 |
egg chorion | 3.80e-21 | 3 |
chorion | 1.74e-15 | 7 |
intestine | 9.06e-13 | 17 |
extraembryonic membrane | 1.18e-11 | 14 |
membranous layer | 1.18e-11 | 14 |
duodenum | 8.16e-10 | 2 |
microcirculatory vessel | 1.26e-09 | 3 |
endothelium of capillary | 1.26e-09 | 3 |
capillary | 1.26e-09 | 3 |
extraembryonic structure | 2.09e-09 | 24 |
gastrointestinal system | 1.14e-08 | 25 |
dura mater | 5.33e-08 | 1 |
future meninx | 5.33e-08 | 1 |
ectomeninx | 5.33e-08 | 1 |
future dura mater | 5.33e-08 | 1 |
hepatopancreatic ampulla | 6.97e-08 | 1 |
extrahepatic bile duct | 6.97e-08 | 1 |
common bile duct | 6.97e-08 | 1 |
duodenal papilla | 6.97e-08 | 1 |
tricuspid valve | 9.10e-08 | 1 |
right atrium valve | 9.10e-08 | 1 |
outflow tract of atrium | 9.10e-08 | 1 |
outflow part of right atrium | 9.10e-08 | 1 |
right cardiac atrium | 9.10e-08 | 1 |
vermiform appendix | 1.18e-07 | 1 |
caecum | 1.18e-07 | 1 |
midgut | 1.18e-07 | 1 |