FFCP PHASE1:Hg19::chr15:42697065..42697078,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:42697065..42697078,+
|short_description=p8@CAPN3
|description=CAGE_peak_8_at_CAPN3_5end
|association_with_transcript=88bp_to_ENST00000337571,ENST000003972...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=825 | |EntrezGene=825 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1480 | |HGNC=1480 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BQC8,P20807,A4FTZ9 | |UniProt=Q9BQC8,P20807,A4FTZ9 | ||
|association_with_transcript=88bp_to_ENST00000337571,ENST00000397204,NM_173089,NM_173090,uc001zpr.1,uc001zps.1,uc001zpt.1,uc010bcv.1_5end | |||
|cluster_id=chr15:42697065..42697078,+ | |||
|coexpression_cluster_id=C88 | |||
|description=CAGE_peak_8_at_CAPN3_5end | |||
|id=chr15:42697065..42697078,+ | |||
|ontology_enrichment_celltype=CL:0000148!1.09e-16!10;CL:0000541!1.09e-16!10;CL:0000147!3.05e-14!14;CL:0002567!1.66e-09!3;CL:0000710!1.56e-07!20 | |||
|ontology_enrichment_celltype_v019=CL:0000148;1.26e-18;10!CL:0000147;1.53e-16;14!CL:0002567;6.72e-13;3!CL:0000710;9.36e-09;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.33e-18,10;CL:0000541,1.33e-18,10;CL:0000147,1.81e-16,14;CL:0002567,6.73e-13,3;CL:0000710,9.59e-09,20 | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.72e-19;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;8.02e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,7.87e-09,2 | |||
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| ||
|short_description=p8@CAPN3 | |||
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Latest revision as of 16:04, 17 September 2015
Short description: | p8@CAPN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CAPN3_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | 88bp_to_ENST00000337571, ENST00000397204, NM_173089, NM_173090, uc001zpr.1, uc001zps.1, uc001zpt.1, uc010bcv.1_5end |
EntrezGene: | CAPN3 |
HGNC: | 1480 |
UniProt: | Q9BQC8P20807A4FTZ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.33e-18 | 10 |
melanoblast | 1.33e-18 | 10 |
pigment cell | 1.81e-16 | 14 |
light melanocyte | 6.73e-13 | 3 |
neurecto-epithelial cell | 9.59e-09 | 20 |
Ontology term | p-value | n |
---|---|---|
melanoma | 7.87e-09 | 2 |