FFCP PHASE1:Hg19::chr17:74540357..74540388,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=768206 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32528 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=472bp_to_uc002jrz.1_5end | |||
|cluster_id=chr17:74540357..74540388,+ | |||
|coexpression_cluster_id=C3681 | |||
|description=CAGE_peak_1_at_PRCD_5end | |||
|id=chr17:74540357..74540388,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;2.33e-08;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.78e-23;82!UBERON:0006241;4.00e-13;3!UBERON:0003057;4.00e-13;3!UBERON:0002532;2.40e-07;206!UBERON:0010316;2.40e-07;206 | |||
|ontology_enrichment_disease=DOID:171!3.92e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:169;5.03e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,5.29e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.11e-59!57;UBERON:0005068!1.11e-59!57;UBERON:0006241!1.11e-59!57;UBERON:0007135!1.11e-59!57;UBERON:0002346!1.92e-54!90;UBERON:0000073!7.04e-54!94;UBERON:0001016!7.04e-54!94;UBERON:0003075!7.10e-51!86;UBERON:0007284!7.10e-51!86;UBERON:0002616!8.03e-51!59;UBERON:0005743!1.19e-50!86;UBERON:0001017!1.73e-49!82;UBERON:0000955!5.61e-48!69;UBERON:0006238!5.61e-48!69;UBERON:0002780!2.44e-42!41;UBERON:0001890!2.44e-42!41;UBERON:0006240!2.44e-42!41;UBERON:0003080!4.06e-41!42;UBERON:0002020!6.68e-39!34;UBERON:0003528!6.68e-39!34;UBERON:0001893!8.08e-39!34;UBERON:0007023!1.24e-38!115;UBERON:0002791!5.72e-37!33;UBERON:0003056!6.97e-37!61;UBERON:0001869!7.39e-35!32;UBERON:0000924!2.69e-34!173;UBERON:0006601!2.69e-34!173;UBERON:0004121!1.59e-31!169;UBERON:0000033!1.64e-30!123;UBERON:0000153!2.01e-28!129;UBERON:0007811!2.01e-28!129;UBERON:0002619!2.47e-26!22;UBERON:0001950!7.04e-23!20;UBERON:0000956!1.16e-22!25;UBERON:0000203!1.16e-22!25;UBERON:0003076!3.59e-19!15;UBERON:0003057!3.59e-19!15;UBERON:0002308!3.71e-19!9;UBERON:0000125!3.71e-19!9;UBERON:0000025!6.86e-17!194;UBERON:0004732!1.51e-15!13;UBERON:0009663!5.00e-15!7;UBERON:0002420!1.11e-14!9;UBERON:0007245!1.11e-14!9;UBERON:0010009!1.11e-14!9;UBERON:0010011!1.11e-14!9;UBERON:0000454!1.11e-14!9;UBERON:0002298!6.86e-14!8;UBERON:0004733!1.36e-13!12;UBERON:0002028!1.36e-13!12;UBERON:0007277!1.36e-13!12;UBERON:0000119!7.83e-13!312;UBERON:0000200!8.33e-13!6;UBERON:0000483!1.77e-12!309;UBERON:0004111!1.70e-11!241;UBERON:0000477!6.99e-11!286;UBERON:0000064!1.93e-09!219;UBERON:0000369!8.78e-09!4;UBERON:0002435!8.78e-09!4;UBERON:0000204!8.78e-09!4;UBERON:0010082!8.78e-09!4;UBERON:0002680!3.34e-08!9;UBERON:0001895!3.34e-08!9;UBERON:0010092!3.34e-08!9;UBERON:0000475!3.48e-08!365;UBERON:0006331!5.96e-08!3;UBERON:0000988!7.43e-08!3;UBERON:0001896!9.06e-08!3;UBERON:0005290!9.06e-08!3;UBERON:0010096!9.06e-08!3;UBERON:0000922!1.18e-07!612;UBERON:0002240!1.23e-07!3;UBERON:0002021!1.64e-07!5;UBERON:0001872!2.39e-07!5;UBERON:0002771!3.14e-07!3;UBERON:0000923!4.49e-07!604;UBERON:0005291!4.49e-07!604;UBERON:0006598!4.49e-07!604;UBERON:0002532!4.49e-07!604;UBERON:0002050!5.00e-07!605;UBERON:0005423!5.00e-07!605;UBERON:0000349!5.04e-07!5;UBERON:0005383!5.72e-07!3;UBERON:0005382!5.72e-07!3;UBERON:0000062!6.72e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;8.07e-52;34!UBERON:0003528;3.19e-49;34!UBERON:0002020;3.19e-49;34!UBERON:0002791;1.94e-46;32!UBERON:0001869;2.63e-46;32!UBERON:0000073;1.12e-44;53!UBERON:0002616;1.12e-44;53!UBERON:0002780;1.99e-43;41!UBERON:0001890;1.99e-43;41!UBERON:0002619;1.94e-40;22!UBERON:0000956;2.47e-35;25!UBERON:0000203;2.47e-35;25!UBERON:0001950;5.04e-34;20!UBERON:0001017;2.00e-31;75!UBERON:0000955;7.46e-30;68!UBERON:0000125;2.47e-28;9!UBERON:0002308;2.47e-28;9!UBERON:0001016;2.70e-27;83!UBERON:0002298;2.91e-25;6!UBERON:0004732;1.95e-24;13!UBERON:0004733;7.81e-21;12!UBERON:0002028;7.81e-21;12!UBERON:0009663;1.41e-20;7!UBERON:0000200;1.19e-16;6!UBERON:0007023;3.34e-16;114!UBERON:0002420;7.21e-16;9!UBERON:0007245;7.21e-16;9!UBERON:0010009;7.21e-16;9!UBERON:0010011;7.21e-16;9!UBERON:0000454;7.21e-16;9!UBERON:0000988;1.36e-13;3!UBERON:0001896;1.98e-13;3!UBERON:0005290;1.98e-13;3!UBERON:0002021;2.32e-13;5!UBERON:0002240;4.00e-13;3!UBERON:0005174;4.00e-13;3!UBERON:0001137;4.00e-13;3!UBERON:0001872;6.15e-13;5!UBERON:0011216;2.06e-12;132!UBERON:0002680;3.98e-11;9!UBERON:0001895;3.98e-11;9!UBERON:0005162;6.56e-10;2!UBERON:0000122;6.56e-10;2!UBERON:0002148;1.12e-09;2!UBERON:0006331;1.12e-09;2!UBERON:0009662;1.12e-09;2!UBERON:0001897;1.14e-09;2!UBERON:0001875;1.14e-09;2!UBERON:0006514;1.14e-09;2!UBERON:0010225;1.14e-09;2!UBERON:0000369;3.32e-09;4!UBERON:0002435;3.32e-09;4!UBERON:0000204;3.32e-09;4!UBERON:0002771;4.51e-09;2!UBERON:0001954;8.79e-09;2!UBERON:0003022;8.79e-09;2!UBERON:0002421;8.79e-09;2!UBERON:0002600;8.79e-09;2!UBERON:0000013;2.33e-08;5!UBERON:0002410;2.33e-08;5!UBERON:0000010;6.43e-08;8!UBERON:0000349;1.54e-07;5!UBERON:0010314;2.02e-07;132 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0.087834785693126,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0,0,0,0,0,0,0,0,0,0.428933980974443,0.542621605391443,0.823240336780769,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391602314925481,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984685914873589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90799823828566,5.65885398787293,0,0,0,0,0,0,0,0,0,0,2.65722415744152,0.723578631752448,1.52581736317083,0.221158519862449,1.18219047581419,1.53569778007781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,13.7498311280581,0.802577647298789,15.4614534178724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,3.54540457352921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6088260629056,10.8155249324675,1.27746588066972,0,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,3.18091875923721,2.45166131000836,0,0,0,0,0,2.55148137963704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.8332763306859,9.78521252895906,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0.886068179966986,3.53876168215693,2.3786276834235,11.4681839138014,5.99016878299002,7.20318274120048,0,0,0,0,0,0.468334905806882,1.7390523433299,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0.155262956876259,0,0,0,0.150257608997218,0,0.406870733204662,0.363697318405119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.14775308455192,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,3.19735928259129,36.9839103090619,0,28.1760866535396,0.678930119816101,0,0.371807292777007,0,0,0,0,0,0,2.89031512934068,4.25089728976755,5.10828348982884,4.30744364905586,0,3.25039086581824,4.84426936895553,24.2708014440562,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,4.18733024634047,4.68646859168308,2.89361515101658,2.91712726891971,0,0,0,0.175871244359621,0,0,0.336283722218824,0,0,0,0,0,9.78764154866377,4.20945750802234,0,0,0,2.98519620840404,0,0,0,0,0.0714765441766563,0.158013611732727,3.71972561178001,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0.437119121007915,0,0,0,13.3489757638163,3.86160320425212,4.6492130034174,0,0,0.193373663920732,0,0,0,0,0,0,17.6307687276285,0.315543124386369,3.26359152916391,0,0,0,0,0,0,0,20.9052526668871,0,0,0,0,0,0,10.7792027129641,12.6188254951512,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p1@PRCD | |||
}} |
Latest revision as of 15:44, 17 September 2015
Short description: | p1@PRCD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PRCD_5end |
Coexpression cluster: | C3681_neuroblastoma_optic_teratocarcinoma_substantia_diencephalon_corpus_globus |
Association with transcript: | 472bp_to_uc002jrz.1_5end |
EntrezGene: | PRCD |
HGNC: | 32528 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 5.29e-07 | 6 |