FFCP PHASE1:Hg19::chr11:31832862..31832884,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5080 | |EntrezGene=5080 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8620 | |HGNC=8620 | ||
|TSSclassifier=strong | |||
|UniProt=P26367,Q66SS1,F1T0F8 | |UniProt=P26367,Q66SS1,F1T0F8 | ||
|association_with_transcript=0bp_to_ENST00000379115,NM_000280,NM_001604,uc001mtf.3,uc001mtg.3,uc001mth.3_5end | |association_with_transcript=0bp_to_ENST00000379115,NM_000280,NM_001604,uc001mtf.3,uc001mtg.3,uc001mth.3_5end | ||
|cluster_id=chr11:31832862..31832884,- | |||
|coexpression_cluster_id=C798 | |coexpression_cluster_id=C798 | ||
|description=CAGE_peak_2_at_PAX6_5end | |description=CAGE_peak_2_at_PAX6_5end | ||
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|ontology_enrichment_celltype=CL:0000128!2.63e-08!7;CL:0000126!2.63e-08!7;CL:0000127!2.63e-08!7;CL:0002453!2.63e-08!7 | |ontology_enrichment_celltype=CL:0000128!2.63e-08!7;CL:0000126!2.63e-08!7;CL:0000127!2.63e-08!7;CL:0002453!2.63e-08!7 | ||
|ontology_enrichment_celltype_v019=CL:0000128;2.17e-12;7!CL:0000126;2.17e-12;7!CL:0000127;2.17e-12;7!CL:0002319;1.29e-10;25!CL:0000306;1.70e-07;4!CL:0002222;1.70e-07;4!CL:0002224;1.70e-07;4!CL:0002605;2.79e-07;3 | |ontology_enrichment_celltype_v019=CL:0000128;2.17e-12;7!CL:0000126;2.17e-12;7!CL:0000127;2.17e-12;7!CL:0002319;1.29e-10;25!CL:0000306;1.70e-07;4!CL:0002222;1.70e-07;4!CL:0002224;1.70e-07;4!CL:0002605;2.79e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000128,2.37e-12,7;CL:0000126,2.37e-12,7;CL:0000127,2.37e-12,7;CL:0002453,2.37e-12,7;CL:0002319,1.45e-10,25;CL:0000133,9.97e-09,59;CL:0000306,1.63e-07,4;CL:0002222,1.63e-07,4;CL:0002224,1.63e-07,4;CL:0002605,2.88e-07,3;CL:0000221,6.13e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.16e-13;82!UBERON:0006215;1.80e-07;3 | |ontology_enrichment_development_v019=UBERON:0006601;2.16e-13;82!UBERON:0006215;1.80e-07;3 | ||
|ontology_enrichment_disease=DOID:0050687!2.20e-07!143 | |ontology_enrichment_disease=DOID:0050687!2.20e-07!143 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!8.66e-57!90;UBERON:0001049!1.81e-55!57;UBERON:0005068!1.81e-55!57;UBERON:0006241!1.81e-55!57;UBERON:0007135!1.81e-55!57;UBERON:0003075!1.81e-55!86;UBERON:0007284!1.81e-55!86;UBERON:0005743!2.30e-55!86;UBERON:0000073!1.52e-52!94;UBERON:0001016!1.52e-52!94;UBERON:0001017!9.58e-52!82;UBERON:0002616!8.42e-48!59;UBERON:0003056!1.19e-46!61;UBERON:0000955!2.70e-44!69;UBERON:0006238!2.70e-44!69;UBERON:0002780!3.31e-41!41;UBERON:0001890!3.31e-41!41;UBERON:0006240!3.31e-41!41;UBERON:0003080!7.46e-40!42;UBERON:0001893!2.38e-36!34;UBERON:0002020!3.68e-36!34;UBERON:0003528!3.68e-36!34;UBERON:0002791!1.99e-35!33;UBERON:0001869!2.09e-34!32;UBERON:0000033!1.77e-33!123;UBERON:0000153!1.25e-32!129;UBERON:0007811!1.25e-32!129;UBERON:0000924!4.49e-31!173;UBERON:0006601!4.49e-31!173;UBERON:0004121!1.17e-29!169;UBERON:0000956!5.74e-27!25;UBERON:0000203!5.74e-27!25;UBERON:0002619!1.95e-23!22;UBERON:0001950!4.44e-21!20;UBERON:0007023!1.76e-17!115;UBERON:0003076!3.38e-16!15;UBERON:0003057!3.38e-16!15;UBERON:0004733!3.06e-13!12;UBERON:0002028!3.06e-13!12;UBERON:0007277!3.06e-13!12;UBERON:0004732!6.52e-12!13;UBERON:0007625!3.11e-11!11;UBERON:0002420!5.62e-11!9;UBERON:0007245!5.62e-11!9;UBERON:0010009!5.62e-11!9;UBERON:0010011!5.62e-11!9;UBERON:0000454!5.62e-11!9;UBERON:0002308!1.55e-10!9;UBERON:0000125!1.55e-10!9;UBERON:0002680!3.02e-10!9;UBERON:0001895!3.02e-10!9;UBERON:0010092!3.02e-10!9;UBERON:0000970!8.69e-10!20;UBERON:0002104!4.22e-09!21;UBERON:0000025!4.27e-09!194;UBERON:0000019!7.93e-09!19;UBERON:0000047!7.93e-09!19;UBERON:0004088!7.93e-09!19;UBERON:0003072!7.93e-09!19;UBERON:0003071!7.93e-09!19;UBERON:0004128!7.93e-09!19;UBERON:0009663!8.99e-09!7;UBERON:0000064!2.05e-08!219;UBERON:0000483!3.09e-08!309;UBERON:0000119!6.21e-08!312;UBERON:0000020!6.42e-08!23;UBERON:0000200!8.06e-08!6;UBERON:0001871!8.25e-08!7;UBERON:0002037!1.09e-07!6;UBERON:0006215!1.09e-07!6;UBERON:0001456!1.35e-07!21;UBERON:0001032!2.09e-07!24;UBERON:0004456!2.09e-07!24;UBERON:0000349!3.70e-07!5;UBERON:0002021!7.70e-07!5;UBERON:0002298!8.95e-07!8;UBERON:0001872!8.98e-07!5 | |ontology_enrichment_uberon=UBERON:0002346!8.66e-57!90;UBERON:0001049!1.81e-55!57;UBERON:0005068!1.81e-55!57;UBERON:0006241!1.81e-55!57;UBERON:0007135!1.81e-55!57;UBERON:0003075!1.81e-55!86;UBERON:0007284!1.81e-55!86;UBERON:0005743!2.30e-55!86;UBERON:0000073!1.52e-52!94;UBERON:0001016!1.52e-52!94;UBERON:0001017!9.58e-52!82;UBERON:0002616!8.42e-48!59;UBERON:0003056!1.19e-46!61;UBERON:0000955!2.70e-44!69;UBERON:0006238!2.70e-44!69;UBERON:0002780!3.31e-41!41;UBERON:0001890!3.31e-41!41;UBERON:0006240!3.31e-41!41;UBERON:0003080!7.46e-40!42;UBERON:0001893!2.38e-36!34;UBERON:0002020!3.68e-36!34;UBERON:0003528!3.68e-36!34;UBERON:0002791!1.99e-35!33;UBERON:0001869!2.09e-34!32;UBERON:0000033!1.77e-33!123;UBERON:0000153!1.25e-32!129;UBERON:0007811!1.25e-32!129;UBERON:0000924!4.49e-31!173;UBERON:0006601!4.49e-31!173;UBERON:0004121!1.17e-29!169;UBERON:0000956!5.74e-27!25;UBERON:0000203!5.74e-27!25;UBERON:0002619!1.95e-23!22;UBERON:0001950!4.44e-21!20;UBERON:0007023!1.76e-17!115;UBERON:0003076!3.38e-16!15;UBERON:0003057!3.38e-16!15;UBERON:0004733!3.06e-13!12;UBERON:0002028!3.06e-13!12;UBERON:0007277!3.06e-13!12;UBERON:0004732!6.52e-12!13;UBERON:0007625!3.11e-11!11;UBERON:0002420!5.62e-11!9;UBERON:0007245!5.62e-11!9;UBERON:0010009!5.62e-11!9;UBERON:0010011!5.62e-11!9;UBERON:0000454!5.62e-11!9;UBERON:0002308!1.55e-10!9;UBERON:0000125!1.55e-10!9;UBERON:0002680!3.02e-10!9;UBERON:0001895!3.02e-10!9;UBERON:0010092!3.02e-10!9;UBERON:0000970!8.69e-10!20;UBERON:0002104!4.22e-09!21;UBERON:0000025!4.27e-09!194;UBERON:0000019!7.93e-09!19;UBERON:0000047!7.93e-09!19;UBERON:0004088!7.93e-09!19;UBERON:0003072!7.93e-09!19;UBERON:0003071!7.93e-09!19;UBERON:0004128!7.93e-09!19;UBERON:0009663!8.99e-09!7;UBERON:0000064!2.05e-08!219;UBERON:0000483!3.09e-08!309;UBERON:0000119!6.21e-08!312;UBERON:0000020!6.42e-08!23;UBERON:0000200!8.06e-08!6;UBERON:0001871!8.25e-08!7;UBERON:0002037!1.09e-07!6;UBERON:0006215!1.09e-07!6;UBERON:0001456!1.35e-07!21;UBERON:0001032!2.09e-07!24;UBERON:0004456!2.09e-07!24;UBERON:0000349!3.70e-07!5;UBERON:0002021!7.70e-07!5;UBERON:0002298!8.95e-07!8;UBERON:0001872!8.98e-07!5 | ||
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| ||
|short_description=p2@PAX6 | |short_description=p2@PAX6 | ||
}} | }} |
Latest revision as of 15:02, 17 September 2015
Short description: | p2@PAX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PAX6_5end |
Coexpression cluster: | C798_cerebellum_small_carcinosarcoma_argyrophil_Neural_gastric_Ciliary |
Association with transcript: | 0bp_to_ENST00000379115, NM_000280, NM_001604, uc001mtf.3, uc001mtg.3, uc001mth.3_5end |
EntrezGene: | PAX6 |
HGNC: | 8620 |
UniProt: | P26367Q66SS1F1T0F8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 2.37e-12 | 7 |
macroglial cell | 2.37e-12 | 7 |
astrocyte | 2.37e-12 | 7 |
oligodendrocyte precursor cell | 2.37e-12 | 7 |
neural cell | 1.45e-10 | 25 |
neurectodermal cell | 9.97e-09 | 59 |
crystallin accumulating cell | 1.63e-07 | 4 |
vertebrate lens cell | 1.63e-07 | 4 |
lens epithelial cell | 1.63e-07 | 4 |
astrocyte of the cerebral cortex | 2.88e-07 | 3 |
ectodermal cell | 6.13e-07 | 72 |