FFCP PHASE1:Hg19::chr2:51259229..51259279,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:51259229..51259279,- to FFCP PHASE1:Hg19::chr2:51259229..51259279,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9378 | |EntrezGene=9378 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8008 | |HGNC=8008 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000405472_5end | |||
|cluster_id=chr2:51259229..51259279,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_1_at_NRXN1_5end | |||
|id=chr2:51259229..51259279,- | |||
|ontology_enrichment_celltype=CL:0000047!2.91e-09!8;CL:0000540!1.54e-07!6;CL:0000031!1.54e-07!6;CL:0000404!1.54e-07!6;CL:0002319!9.47e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000540;1.07e-08;6!CL:0000404;1.07e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,9.38e-11,8;CL:0000540,1.06e-08,6;CL:0000031,1.06e-08,6;CL:0000404,1.06e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.11e-18;82!CL:0000031;1.07e-08;6!UBERON:0002532;2.69e-07;206!UBERON:0010316;2.69e-07;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.03e-78!115;UBERON:0001017!1.70e-61!82;UBERON:0005743!1.75e-59!86;UBERON:0001049!5.30e-59!57;UBERON:0005068!5.30e-59!57;UBERON:0006241!5.30e-59!57;UBERON:0007135!5.30e-59!57;UBERON:0000073!1.36e-56!94;UBERON:0001016!1.36e-56!94;UBERON:0002616!2.91e-49!59;UBERON:0000955!5.49e-48!69;UBERON:0006238!5.49e-48!69;UBERON:0003080!1.41e-45!42;UBERON:0003075!2.93e-45!86;UBERON:0007284!2.93e-45!86;UBERON:0002780!5.58e-45!41;UBERON:0001890!5.58e-45!41;UBERON:0006240!5.58e-45!41;UBERON:0002346!3.40e-42!90;UBERON:0001893!3.92e-38!34;UBERON:0002020!4.37e-38!34;UBERON:0003528!4.37e-38!34;UBERON:0002791!6.52e-37!33;UBERON:0001869!3.31e-36!32;UBERON:0004121!6.31e-34!169;UBERON:0000924!1.82e-32!173;UBERON:0006601!1.82e-32!173;UBERON:0003056!3.62e-32!61;UBERON:0002619!3.30e-29!22;UBERON:0000153!7.53e-29!129;UBERON:0007811!7.53e-29!129;UBERON:0000956!1.64e-28!25;UBERON:0000203!1.64e-28!25;UBERON:0000033!2.05e-27!123;UBERON:0001950!7.90e-27!20;UBERON:0000025!6.04e-16!194;UBERON:0004111!2.82e-14!241;UBERON:0003076!4.62e-14!15;UBERON:0003057!4.62e-14!15;UBERON:0004732!8.78e-12!13;UBERON:0000064!1.03e-11!219;UBERON:0000477!1.17e-11!286;UBERON:0000922!3.26e-11!612;UBERON:0002420!3.52e-11!9;UBERON:0007245!3.52e-11!9;UBERON:0010009!3.52e-11!9;UBERON:0010011!3.52e-11!9;UBERON:0000454!3.52e-11!9;UBERON:0001871!4.39e-11!7;UBERON:0004733!4.79e-11!12;UBERON:0002028!4.79e-11!12;UBERON:0007277!4.79e-11!12;UBERON:0002308!6.74e-11!9;UBERON:0000125!6.74e-11!9;UBERON:0000062!1.49e-09!511;UBERON:0000468!2.00e-09!659;UBERON:0000481!2.01e-09!347;UBERON:0002298!2.95e-09!8;UBERON:0000483!3.03e-09!309;UBERON:0000119!6.26e-09!312;UBERON:0009663!8.35e-09!7;UBERON:0000200!1.06e-08!6;UBERON:0002050!1.37e-08!605;UBERON:0005423!1.37e-08!605;UBERON:0000923!3.15e-08!604;UBERON:0005291!3.15e-08!604;UBERON:0006598!3.15e-08!604;UBERON:0002532!3.15e-08!604;UBERON:0001894!3.89e-08!7;UBERON:0006222!3.89e-08!7;UBERON:0002680!4.43e-08!9;UBERON:0001895!4.43e-08!9;UBERON:0010092!4.43e-08!9;UBERON:0000475!7.16e-08!365;UBERON:0000467!8.55e-08!625;UBERON:0000480!1.02e-07!626;UBERON:0002021!1.06e-07!5;UBERON:0001872!1.30e-07!5;UBERON:0000349!1.58e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.26e-35;41!UBERON:0001890;2.26e-35;41!UBERON:0001869;1.04e-34;32!UBERON:0003528;1.22e-34;34!UBERON:0002020;1.22e-34;34!UBERON:0001893;1.22e-34;34!UBERON:0002619;1.38e-34;22!UBERON:0002791;2.00e-34;32!UBERON:0000073;3.18e-32;53!UBERON:0002616;3.18e-32;53!UBERON:0001950;9.71e-32;20!UBERON:0000956;1.40e-29;25!UBERON:0000203;1.40e-29;25!UBERON:0001017;2.05e-23;75!UBERON:0000955;4.98e-23;68!UBERON:0001016;8.51e-22;83!UBERON:0007023;4.35e-20;114!UBERON:0002420;4.84e-13;9!UBERON:0007245;4.84e-13;9!UBERON:0010009;4.84e-13;9!UBERON:0010011;4.84e-13;9!UBERON:0000454;4.84e-13;9!UBERON:0000125;1.04e-12;9!UBERON:0002308;1.04e-12;9!UBERON:0001871;1.52e-11;6!UBERON:0011216;9.81e-11;132!UBERON:0004732;1.97e-10;13!UBERON:0009663;3.27e-10;7!UBERON:0000200;4.37e-10;6!UBERON:0000922;1.13e-09;49!UBERON:0004733;1.48e-09;12!UBERON:0002028;1.48e-09;12!UBERON:0001894;2.07e-09;7!UBERON:0002298;4.93e-09;6!UBERON:0002021;6.88e-09;5!UBERON:0001872;8.60e-09;5!UBERON:0000349;1.09e-08;5!UBERON:0000369;8.00e-07;4!UBERON:0002435;8.00e-07;4!UBERON:0000204;8.00e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.70e-75,114;UBERON:0001017,2.16e-66,81;UBERON:0001016,1.71e-63,89;UBERON:0001049,2.76e-61,56;UBERON:0005068,2.76e-61,56;UBERON:0006241,2.76e-61,56;UBERON:0007135,2.76e-61,56;UBERON:0000073,2.23e-57,53;UBERON:0002616,2.23e-57,53;UBERON:0000955,1.38e-50,68;UBERON:0006238,1.38e-50,68;UBERON:0002780,3.40e-49,41;UBERON:0001890,3.40e-49,41;UBERON:0003080,3.40e-49,41;UBERON:0006240,3.40e-49,41;UBERON:0003075,2.82e-46,82;UBERON:0007284,2.82e-46,82;UBERON:0002346,3.22e-43,86;UBERON:0001893,5.14e-41,34;UBERON:0003528,5.82e-41,34;UBERON:0002020,5.82e-41,34;UBERON:0001869,1.04e-38,32;UBERON:0002791,2.26e-38,32;UBERON:0010371,4.95e-37,104;UBERON:0011216,8.15e-37,223;UBERON:0004121,4.23e-36,171;UBERON:0000924,4.23e-36,171;UBERON:0006601,4.23e-36,171;UBERON:0002619,1.37e-34,22;UBERON:0003056,9.80e-34,61;UBERON:0001950,9.58e-32,20;UBERON:0000956,1.39e-29,25;UBERON:0000203,1.39e-29,25;UBERON:0010314,5.60e-29,132;UBERON:0000025,1.12e-15,192;UBERON:0004111,2.11e-14,240;UBERON:0002420,4.84e-13,9;UBERON:0007245,4.84e-13,9;UBERON:0010009,4.84e-13,9;UBERON:0010011,4.84e-13,9;UBERON:0000454,4.84e-13,9;UBERON:0003076,5.19e-13,15;UBERON:0003057,5.19e-13,15;UBERON:0000125,1.05e-12,9;UBERON:0002308,1.05e-12,9;UBERON:0001871,1.51e-11,6;UBERON:0000922,4.59e-11,592;UBERON:0004732,1.98e-10,13;UBERON:0009663,3.29e-10,7;UBERON:0000200,4.37e-10,6;UBERON:0004733,1.46e-09,12;UBERON:0002028,1.46e-09,12;UBERON:0007277,1.46e-09,12;UBERON:0001894,2.06e-09,7;UBERON:0006222,2.06e-09,7;UBERON:0002050,2.25e-09,564;UBERON:0000923,3.43e-09,560;UBERON:0010316,3.43e-09,560;UBERON:0005291,3.43e-09,560;UBERON:0006598,3.43e-09,560;UBERON:0010317,3.43e-09,560;UBERON:0002532,3.43e-09,560;UBERON:0002298,4.87e-09,6;UBERON:0002021,6.77e-09,5;UBERON:0001872,8.67e-09,5;UBERON:0000349,1.09e-08,5;UBERON:0005423,1.40e-08,581;UBERON:0000483,3.51e-08,306;UBERON:0000119,6.37e-08,309;UBERON:0000369,8.06e-07,4;UBERON:0002435,8.06e-07,4;UBERON:0000204,8.06e-07,4;UBERON:0010082,8.06e-07,4 | |||
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| ||
|short_description=p1@NRXN1 | |||
}} | }} |
Latest revision as of 13:56, 17 September 2015
Short description: | p1@NRXN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NRXN1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000405472_5end |
EntrezGene: | NRXN1 |
HGNC: | 8008 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 9.38e-11 | 8 |
neuron | 1.06e-08 | 6 |
neuroblast | 1.06e-08 | 6 |
electrically signaling cell | 1.06e-08 | 6 |