FFCP PHASE1:Hg19::chr15:41120896..41120922,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54866 | |EntrezGene=54866 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14953 | |HGNC=14953 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NXH3,E9PAT1,Q4V755 | |UniProt=Q9NXH3,E9PAT1,Q4V755 | ||
|association_with_transcript=0bp_to_ENST00000299174,ENST00000427255,NM_001130143,NM_017726,uc001zmy.2,uc001zmz.2_5end | |association_with_transcript=0bp_to_ENST00000299174,ENST00000427255,NM_001130143,NM_017726,uc001zmy.2,uc001zmz.2_5end | ||
|cluster_id=chr15:41120896..41120922,- | |||
|coexpression_cluster_id=C25 | |coexpression_cluster_id=C25 | ||
|description=CAGE_peak_1_at_PPP1R14D_5end | |description=CAGE_peak_1_at_PPP1R14D_5end | ||
|id=chr15:41120896..41120922,- | |id=chr15:41120896..41120922,- | ||
|ontology_enrichment_celltype=CL:1000415!8.82e-10!2 | |ontology_enrichment_celltype=CL:1000415!8.82e-10!2 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,9.54e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0001045;1.57e-12;1!UBERON:0006242;1.75e-12;1 | |||
|ontology_enrichment_disease=DOID:0050687!3.81e-08!143;DOID:305!9.05e-08!106;DOID:299!1.06e-07!25 | |ontology_enrichment_disease=DOID:0050687!3.81e-08!143;DOID:305!9.05e-08!106;DOID:299!1.06e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:0050619;3.85e-12;1!DOID:1357;3.85e-12;1!DOID:4468;7.61e-07;2!DOID:3493;8.52e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,4.31e-12,1;DOID:1357,4.31e-12,1;DOID:4468,7.61e-07,2;DOID:3493,8.06e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000160!6.61e-21!27;UBERON:0000059!1.87e-19!11;UBERON:0005409!1.85e-18!35;UBERON:0002294!7.89e-16!7;UBERON:0001173!7.89e-16!7;UBERON:0004912!7.89e-16!7;UBERON:0004907!1.91e-14!5;UBERON:0002110!4.70e-14!3;UBERON:0006242!4.70e-14!3;UBERON:0001155!1.05e-12!9;UBERON:0004119!2.48e-12!169;UBERON:0000925!2.48e-12!169;UBERON:0006595!2.48e-12!169;UBERON:0001007!1.32e-11!155;UBERON:0001555!1.32e-11!155;UBERON:0007026!1.32e-11!155;UBERON:0004921!4.98e-11!129;UBERON:0004185!4.98e-11!129;UBERON:0001052!1.98e-10!4 | |ontology_enrichment_uberon=UBERON:0000160!6.61e-21!27;UBERON:0000059!1.87e-19!11;UBERON:0005409!1.85e-18!35;UBERON:0002294!7.89e-16!7;UBERON:0001173!7.89e-16!7;UBERON:0004912!7.89e-16!7;UBERON:0004907!1.91e-14!5;UBERON:0002110!4.70e-14!3;UBERON:0006242!4.70e-14!3;UBERON:0001155!1.05e-12!9;UBERON:0004119!2.48e-12!169;UBERON:0000925!2.48e-12!169;UBERON:0006595!2.48e-12!169;UBERON:0001007!1.32e-11!155;UBERON:0001555!1.32e-11!155;UBERON:0007026!1.32e-11!155;UBERON:0004921!4.98e-11!129;UBERON:0004185!4.98e-11!129;UBERON:0001052!1.98e-10!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;4.32e-39;17!UBERON:0005409;1.96e-30;22!UBERON:0000059;1.67e-25;11!UBERON:0002108;5.39e-21;4!UBERON:0001155;2.05e-20;9!UBERON:0004921;6.19e-19;33!UBERON:0002110;1.42e-15;3!UBERON:0002294;1.08e-14;7!UBERON:0001173;1.08e-14;7!UBERON:0001154;1.57e-12;1!UBERON:0001153;1.57e-12;1!UBERON:0009854;1.57e-12;1!UBERON:0001764;3.85e-12;1!UBERON:0001825;3.85e-12;1!UBERON:0004907;8.13e-10;5!UBERON:0001555;7.75e-08;54!UBERON:0001007;9.31e-08;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.21e-39,17;UBERON:0005409,7.69e-27,25;UBERON:0000059,1.67e-25,11;UBERON:0002108,5.21e-21,4;UBERON:0001155,2.05e-20,9;UBERON:0002110,1.22e-15,3;UBERON:0006242,1.22e-15,3;UBERON:0001154,1.57e-12,1;UBERON:0001153,1.57e-12,1;UBERON:0001045,1.57e-12,1;UBERON:0001764,4.31e-12,1;UBERON:0001825,4.31e-12,1;UBERON:0002294,1.41e-11,9;UBERON:0001173,1.41e-11,9;UBERON:0004912,1.41e-11,9;UBERON:0004907,8.13e-10,5;UBERON:0001007,9.73e-08,145;UBERON:0001555,9.73e-08,145;UBERON:0007026,9.73e-08,145;UBERON:0004119,7.21e-07,160;UBERON:0000925,7.21e-07,160;UBERON:0006595,7.21e-07,160 | |||
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| ||
|short_description=p1@PPP1R14D | |short_description=p1@PPP1R14D | ||
}} | }} |
Latest revision as of 13:51, 17 September 2015
Short description: | p1@PPP1R14D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PPP1R14D_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 0bp_to_ENST00000299174, ENST00000427255, NM_001130143, NM_017726, uc001zmy.2, uc001zmz.2_5end |
EntrezGene: | PPP1R14D |
HGNC: | 14953 |
UniProt: | Q9NXH3E9PAT1Q4V755 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 9.54e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.21e-39 | 17 |
gastrointestinal system | 7.69e-27 | 25 |
large intestine | 1.67e-25 | 11 |
small intestine | 5.21e-21 | 4 |
colon | 2.05e-20 | 9 |
gallbladder | 1.22e-15 | 3 |
gall bladder primordium | 1.22e-15 | 3 |
vermiform appendix | 1.57e-12 | 1 |
caecum | 1.57e-12 | 1 |
midgut | 1.57e-12 | 1 |
maxillary sinus | 4.31e-12 | 1 |
paranasal sinus | 4.31e-12 | 1 |
biliary system | 1.41e-11 | 9 |
biliary tree | 1.41e-11 | 9 |
biliary bud | 1.41e-11 | 9 |
lower digestive tract | 8.13e-10 | 5 |
digestive system | 9.73e-08 | 145 |
digestive tract | 9.73e-08 | 145 |
primitive gut | 9.73e-08 | 145 |
endoderm-derived structure | 7.21e-07 | 160 |
endoderm | 7.21e-07 | 160 |
presumptive endoderm | 7.21e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 4.31e-12 | 1 |
maxillary sinus cancer | 4.31e-12 | 1 |
clear cell adenocarcinoma | 7.61e-07 | 2 |
signet ring cell adenocarcinoma | 8.06e-07 | 2 |