FFCP PHASE1:Hg19::chr17:73553885..73553901,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3993 | |EntrezGene=3993 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6629 | |HGNC=6629 | ||
|TSSclassifier=strong | |||
|UniProt=G3V1I9 | |UniProt=G3V1I9 | ||
|association_with_transcript=0bp_to_ENST00000545227,uc002joj.2_5end | |association_with_transcript=0bp_to_ENST00000545227,uc002joj.2_5end | ||
|cluster_id=chr17:73553885..73553901,+ | |||
|coexpression_cluster_id=C783 | |||
|description=CAGE_peak_3_at_LLGL2_5end | |description=CAGE_peak_3_at_LLGL2_5end | ||
|id=chr17:73553885..73553901,+ | |id=chr17:73553885..73553901,+ | ||
|ontology_enrichment_celltype=CL:0000181!5.99e-20!12;CL:0000417!5.99e-20!12;CL:0000668!5.99e-20!12;CL:0000414!5.99e-20!12;CL:0000412!5.99e-20!12;CL:0000182!5.99e-20!12;CL:0000066!5.65e-08!254 | |ontology_enrichment_celltype=CL:0000181!5.99e-20!12;CL:0000417!5.99e-20!12;CL:0000668!5.99e-20!12;CL:0000414!5.99e-20!12;CL:0000412!5.99e-20!12;CL:0000182!5.99e-20!12;CL:0000066!5.65e-08!254 | ||
|ontology_enrichment_celltype_v019=CL:0000182;6.88e-32;12!CL:0002535;3.57e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.83e-32,12;CL:0002535,3.43e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.27e-22;11!UBERON:0009497;3.32e-19;13!UBERON:0001041;1.70e-08;30!UBERON:0003104;3.66e-08;31 | |||
|ontology_enrichment_disease=DOID:305!1.61e-09!106;DOID:0050687!4.43e-07!143 | |ontology_enrichment_disease=DOID:305!1.61e-09!106;DOID:0050687!4.43e-07!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p3@LLGL2 | |short_description=p3@LLGL2 | ||
}} | }} |
Latest revision as of 11:20, 17 September 2015
Short description: | p3@LLGL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LLGL2_5end |
Coexpression cluster: | C783_argyrophil_Hepatocyte_liver_gastrointestinal_hepatocellular_adenocarcinoma_Intestinal |
Association with transcript: | 0bp_to_ENST00000545227, uc002joj.2_5end |
EntrezGene: | LLGL2 |
HGNC: | 6629 |
UniProt: | G3V1I9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.83e-32 | 12 |
epithelial cell of cervix | 3.43e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
liver | 8.57e-29 | 19 |
digestive gland | 8.57e-29 | 19 |
liver bud | 8.57e-29 | 19 |
hepatic diverticulum | 7.39e-25 | 22 |
liver primordium | 7.39e-25 | 22 |
digestive tract diverticulum | 8.98e-24 | 23 |
epithelial sac | 7.30e-22 | 25 |
epithelium of foregut-midgut junction | 7.30e-22 | 25 |
anatomical boundary | 7.30e-22 | 25 |
hepatobiliary system | 7.30e-22 | 25 |
foregut-midgut junction | 7.30e-22 | 25 |
septum transversum | 7.30e-22 | 25 |
sac | 5.11e-21 | 26 |
exocrine gland | 1.32e-17 | 31 |
exocrine system | 1.32e-17 | 31 |
endocrine gland | 1.42e-15 | 35 |
endocrine system | 4.55e-12 | 45 |
gut epithelium | 5.12e-10 | 54 |
abdomen element | 5.12e-10 | 54 |
abdominal segment element | 5.12e-10 | 54 |
uterine epithelium | 3.43e-09 | 2 |
cervix epithelium | 3.43e-09 | 2 |
gland | 3.81e-09 | 59 |
abdominal segment of trunk | 5.47e-09 | 60 |
abdomen | 5.47e-09 | 60 |
foregut | 3.69e-08 | 87 |