FFCP PHASE1:Hg19::chr17:73553885..73553901,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3993 | |EntrezGene=3993 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6629 | |HGNC=6629 | ||
|TSSclassifier=strong | |||
|UniProt=G3V1I9 | |UniProt=G3V1I9 | ||
|association_with_transcript=0bp_to_ENST00000545227,uc002joj.2_5end | |association_with_transcript=0bp_to_ENST00000545227,uc002joj.2_5end | ||
|cluster_id=chr17:73553885..73553901,+ | |||
|coexpression_cluster_id=C783 | |||
|description=CAGE_peak_3_at_LLGL2_5end | |description=CAGE_peak_3_at_LLGL2_5end | ||
|id=chr17:73553885..73553901,+ | |id=chr17:73553885..73553901,+ | ||
|ontology_enrichment_celltype=CL:0000181!5.99e-20!12;CL:0000417!5.99e-20!12;CL:0000668!5.99e-20!12;CL:0000414!5.99e-20!12;CL:0000412!5.99e-20!12;CL:0000182!5.99e-20!12;CL:0000066!5.65e-08!254 | |ontology_enrichment_celltype=CL:0000181!5.99e-20!12;CL:0000417!5.99e-20!12;CL:0000668!5.99e-20!12;CL:0000414!5.99e-20!12;CL:0000412!5.99e-20!12;CL:0000182!5.99e-20!12;CL:0000066!5.65e-08!254 | ||
|ontology_enrichment_celltype_v019=CL:0000182;6.88e-32;12!CL:0002535;3.57e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.83e-32,12;CL:0002535,3.43e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.27e-22;11!UBERON:0009497;3.32e-19;13!UBERON:0001041;1.70e-08;30!UBERON:0003104;3.66e-08;31 | |||
|ontology_enrichment_disease=DOID:305!1.61e-09!106;DOID:0050687!4.43e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!1.07e-16!55;UBERON:0005173!1.07e-16!55;UBERON:0002107!5.61e-16!19;UBERON:0006925!5.61e-16!19;UBERON:0008836!5.61e-16!19;UBERON:0002417!1.00e-14!61;UBERON:0000916!1.00e-14!61;UBERON:0008835!1.28e-13!22;UBERON:0003894!1.28e-13!22;UBERON:0001737!5.47e-13!9;UBERON:0009854!5.74e-13!23;UBERON:0007499!7.99e-12!25;UBERON:0009497!7.99e-12!25;UBERON:0000015!7.99e-12!25;UBERON:0002423!7.99e-12!25;UBERON:0006235!7.99e-12!25;UBERON:0004161!7.99e-12!25;UBERON:0005057!2.56e-11!26;UBERON:0009856!2.56e-11!26;UBERON:0004921!2.17e-10!129;UBERON:0004185!2.17e-10!129;UBERON:0005177!2.52e-09!107;UBERON:0002365!2.79e-09!31;UBERON:0002330!2.79e-09!31;UBERON:0001041!3.08e-09!98;UBERON:0003929!5.37e-09!54;UBERON:0009569!1.23e-08!113;UBERON:0000077!4.18e-08!130;UBERON:0002368!4.52e-08!35;UBERON:0001007!6.20e-08!155;UBERON:0001555!6.20e-08!155;UBERON:0007026!6.20e-08!155;UBERON:0002113!1.18e-07!27;UBERON:0003918!1.18e-07!27;UBERON:0005095!1.18e-07!27;UBERON:0007687!1.18e-07!27;UBERON:0005911!1.95e-07!82;UBERON:0000466!2.22e-07!126;UBERON:0006947!2.83e-07!3;UBERON:0004054!2.83e-07!3;UBERON:0006554!3.85e-07!44;UBERON:0003104!4.43e-07!238;UBERON:0009142!4.43e-07!238;UBERON:0001008!5.97e-07!45;UBERON:0004119!6.22e-07!169;UBERON:0000925!6.22e-07!169;UBERON:0006595!6.22e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;8.98e-29;19!UBERON:0006925;8.98e-29;19!UBERON:0002423;7.57e-22;25!UBERON:0002365;4.11e-17;31!UBERON:0002330;4.11e-17;31!UBERON:0002368;1.56e-14;33!UBERON:0000949;8.45e-12;43!UBERON:0006955;3.57e-09;2!UBERON:0004801;3.57e-09;2!UBERON:0002530;7.76e-07;57!UBERON:0005172;8.65e-07;52!UBERON:0005173;8.65e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,8.57e-29,19;UBERON:0006925,8.57e-29,19;UBERON:0008836,8.57e-29,19;UBERON:0008835,7.39e-25,22;UBERON:0003894,7.39e-25,22;UBERON:0009854,8.98e-24,23;UBERON:0007499,7.30e-22,25;UBERON:0009497,7.30e-22,25;UBERON:0000015,7.30e-22,25;UBERON:0002423,7.30e-22,25;UBERON:0006235,7.30e-22,25;UBERON:0004161,7.30e-22,25;UBERON:0009856,5.11e-21,26;UBERON:0002365,1.32e-17,31;UBERON:0002330,1.32e-17,31;UBERON:0002368,1.42e-15,35;UBERON:0000949,4.55e-12,45;UBERON:0003929,5.12e-10,54;UBERON:0005172,5.12e-10,54;UBERON:0005173,5.12e-10,54;UBERON:0006955,3.43e-09,2;UBERON:0004801,3.43e-09,2;UBERON:0002530,3.81e-09,59;UBERON:0002417,5.47e-09,60;UBERON:0000916,5.47e-09,60;UBERON:0001041,3.69e-08,87 | |||
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|short_description=p3@LLGL2 | |short_description=p3@LLGL2 | ||
}} | }} |
Latest revision as of 11:20, 17 September 2015
Short description: | p3@LLGL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LLGL2_5end |
Coexpression cluster: | C783_argyrophil_Hepatocyte_liver_gastrointestinal_hepatocellular_adenocarcinoma_Intestinal |
Association with transcript: | 0bp_to_ENST00000545227, uc002joj.2_5end |
EntrezGene: | LLGL2 |
HGNC: | 6629 |
UniProt: | G3V1I9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.83e-32 | 12 |
epithelial cell of cervix | 3.43e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
liver | 8.57e-29 | 19 |
digestive gland | 8.57e-29 | 19 |
liver bud | 8.57e-29 | 19 |
hepatic diverticulum | 7.39e-25 | 22 |
liver primordium | 7.39e-25 | 22 |
digestive tract diverticulum | 8.98e-24 | 23 |
epithelial sac | 7.30e-22 | 25 |
epithelium of foregut-midgut junction | 7.30e-22 | 25 |
anatomical boundary | 7.30e-22 | 25 |
hepatobiliary system | 7.30e-22 | 25 |
foregut-midgut junction | 7.30e-22 | 25 |
septum transversum | 7.30e-22 | 25 |
sac | 5.11e-21 | 26 |
exocrine gland | 1.32e-17 | 31 |
exocrine system | 1.32e-17 | 31 |
endocrine gland | 1.42e-15 | 35 |
endocrine system | 4.55e-12 | 45 |
gut epithelium | 5.12e-10 | 54 |
abdomen element | 5.12e-10 | 54 |
abdominal segment element | 5.12e-10 | 54 |
uterine epithelium | 3.43e-09 | 2 |
cervix epithelium | 3.43e-09 | 2 |
gland | 3.81e-09 | 59 |
abdominal segment of trunk | 5.47e-09 | 60 |
abdomen | 5.47e-09 | 60 |
foregut | 3.69e-08 | 87 |