FFCP PHASE1:Hg19::chr4:25657465..25657481,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10568 | |EntrezGene=10568 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11020 | |HGNC=11020 | ||
|TSSclassifier=strong | |||
|UniProt=O95436 | |UniProt=O95436 | ||
|association_with_transcript=0bp_to_ENST00000382051_5end | |association_with_transcript=0bp_to_ENST00000382051_5end | ||
|cluster_id=chr4:25657465..25657481,+ | |||
|coexpression_cluster_id=C95 | |coexpression_cluster_id=C95 | ||
|description=CAGE_peak_1_at_SLC34A2_5end | |description=CAGE_peak_1_at_SLC34A2_5end | ||
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|ontology_enrichment_celltype=CL:1000507!4.25e-09!12;CL:1000494!4.25e-09!12;CL:1000449!5.39e-09!16;CL:0000039!1.28e-07!7;CL:0000586!1.28e-07!7;CL:1000497!1.29e-07!18;CL:0002518!1.29e-07!18 | |ontology_enrichment_celltype=CL:1000507!4.25e-09!12;CL:1000494!4.25e-09!12;CL:1000449!5.39e-09!16;CL:0000039!1.28e-07!7;CL:0000586!1.28e-07!7;CL:1000497!1.29e-07!18;CL:0002518!1.29e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:1000507;1.41e-15;10!CL:1000494;1.41e-15;10!CL:1000449;5.33e-12;15!CL:1000497;2.88e-10;17!CL:0002518;2.88e-10;17!CL:0002681;2.25e-08;12!CL:0002584;2.25e-08;12 | |ontology_enrichment_celltype_v019=CL:1000507;1.41e-15;10!CL:1000494;1.41e-15;10!CL:1000449;5.33e-12;15!CL:1000497;2.88e-10;17!CL:0002518;2.88e-10;17!CL:0002681;2.25e-08;12!CL:0002584;2.25e-08;12 | ||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.40e-15,10;CL:1000494,1.40e-15,10;CL:1000449,5.31e-12,15;CL:1000497,2.87e-10,17;CL:0002518,2.87e-10,17;CL:0002681,2.38e-08,12;CL:0002584,2.38e-08,12 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004211;1.41e-15;10!UBERON:0009773;1.41e-15;10!UBERON:0001231;1.41e-15;10!UBERON:0004810;1.41e-15;10!UBERON:0006555;5.33e-12;15!UBERON:0004819;5.33e-12;15!UBERON:0001285;5.33e-12;15!UBERON:0007684;5.33e-12;15!UBERON:0002113;1.98e-11;24!UBERON:0011143;1.98e-11;24!UBERON:0006554;6.21e-11;30!UBERON:0001008;6.21e-11;30!UBERON:0000489;4.31e-10;29!UBERON:0001225;2.25e-08;12!UBERON:0008987;2.25e-08;12!UBERON:0001851;5.57e-08;15!UBERON:0005172;3.41e-07;52!UBERON:0005173;3.41e-07;52 | |ontology_enrichment_uberon_v019=UBERON:0004211;1.41e-15;10!UBERON:0009773;1.41e-15;10!UBERON:0001231;1.41e-15;10!UBERON:0004810;1.41e-15;10!UBERON:0006555;5.33e-12;15!UBERON:0004819;5.33e-12;15!UBERON:0001285;5.33e-12;15!UBERON:0007684;5.33e-12;15!UBERON:0002113;1.98e-11;24!UBERON:0011143;1.98e-11;24!UBERON:0006554;6.21e-11;30!UBERON:0001008;6.21e-11;30!UBERON:0000489;4.31e-10;29!UBERON:0001225;2.25e-08;12!UBERON:0008987;2.25e-08;12!UBERON:0001851;5.57e-08;15!UBERON:0005172;3.41e-07;52!UBERON:0005173;3.41e-07;52 | ||
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| ||
|short_description=p1@SLC34A2 | |short_description=p1@SLC34A2 | ||
}} | }} |
Latest revision as of 10:38, 17 September 2015
Short description: | p1@SLC34A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC34A2_5end |
Coexpression cluster: | C95_lung_aorta_trachea_penis_Alveolar_throat_endometrioid |
Association with transcript: | 0bp_to_ENST00000382051_5end |
EntrezGene: | SLC34A2 |
HGNC: | 11020 |
UniProt: | O95436 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.40e-15 | 10 |
nephron tubule epithelial cell | 1.40e-15 | 10 |
epithelial cell of nephron | 5.31e-12 | 15 |
kidney cell | 2.87e-10 | 17 |
kidney epithelial cell | 2.87e-10 | 17 |
kidney cortical cell | 2.38e-08 | 12 |
renal cortical epithelial cell | 2.38e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 1.40e-15 | 10 |
kidney | 5.26e-14 | 26 |
kidney mesenchyme | 5.26e-14 | 26 |
upper urinary tract | 5.26e-14 | 26 |
kidney rudiment | 5.26e-14 | 26 |
kidney field | 5.26e-14 | 26 |
excretory tube | 2.32e-13 | 16 |
kidney epithelium | 2.32e-13 | 16 |
trunk region element | 1.38e-12 | 101 |
cavitated compound organ | 2.00e-12 | 31 |
nephron epithelium | 5.31e-12 | 15 |
renal tubule | 5.31e-12 | 15 |
nephron tubule | 5.31e-12 | 15 |
nephron | 5.31e-12 | 15 |
uriniferous tubule | 5.31e-12 | 15 |
nephrogenic mesenchyme | 5.31e-12 | 15 |
abdomen element | 5.30e-11 | 54 |
abdominal segment element | 5.30e-11 | 54 |
urinary system structure | 9.16e-11 | 47 |
renal system | 2.02e-10 | 48 |
adult organism | 2.70e-10 | 114 |
abdominal segment of trunk | 2.79e-09 | 60 |
abdomen | 2.79e-09 | 60 |
cortex of kidney | 2.38e-08 | 12 |
renal parenchyma | 2.38e-08 | 12 |
compound organ | 3.24e-08 | 68 |
subdivision of trunk | 4.16e-08 | 112 |
cortex | 5.66e-08 | 15 |
anatomical cavity | 3.08e-07 | 61 |