FFCP PHASE1:Hg19::chr8:22014255..22014266,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:22014255..22014266,- to FFCP PHASE1:Hg19::chr8:22014255..22014266,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=203190 | |EntrezGene=203190 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18711 | |HGNC=18711 | ||
|TSSclassifier=strong | |||
|UniProt=A5PLP2 | |UniProt=A5PLP2 | ||
|association_with_transcript=0bp_to_ENST00000424267_5end | |||
|cluster_id=chr8:22014255..22014266,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_LGI3_5end | |||
|id=chr8:22014255..22014266,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.14e-20;82!UBERON:0006241;6.46e-14;3!UBERON:0003057;6.46e-14;3!UBERON:0002532;7.37e-07;206!UBERON:0010316;7.37e-07;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.22e-79!57;UBERON:0005068!1.22e-79!57;UBERON:0006241!1.22e-79!57;UBERON:0007135!1.22e-79!57;UBERON:0002616!7.92e-65!59;UBERON:0001017!5.08e-64!82;UBERON:0005743!1.53e-63!86;UBERON:0002780!7.21e-62!41;UBERON:0001890!7.21e-62!41;UBERON:0006240!7.21e-62!41;UBERON:0001893!1.42e-60!34;UBERON:0002020!2.30e-60!34;UBERON:0003528!2.30e-60!34;UBERON:0003080!3.11e-60!42;UBERON:0000955!5.29e-60!69;UBERON:0006238!5.29e-60!69;UBERON:0000073!1.28e-59!94;UBERON:0001016!1.28e-59!94;UBERON:0003075!5.75e-58!86;UBERON:0007284!5.75e-58!86;UBERON:0007023!5.80e-58!115;UBERON:0002791!1.44e-57!33;UBERON:0001869!6.10e-55!32;UBERON:0002346!6.31e-55!90;UBERON:0003056!5.62e-42!61;UBERON:0002619!7.72e-42!22;UBERON:0001950!1.17e-36!20;UBERON:0000956!1.95e-36!25;UBERON:0000203!1.95e-36!25;UBERON:0000153!8.90e-35!129;UBERON:0007811!8.90e-35!129;UBERON:0000033!3.09e-33!123;UBERON:0004121!1.48e-31!169;UBERON:0000924!1.44e-30!173;UBERON:0006601!1.44e-30!173;UBERON:0002308!1.10e-26!9;UBERON:0000125!1.10e-26!9;UBERON:0002420!3.31e-26!9;UBERON:0007245!3.31e-26!9;UBERON:0010009!3.31e-26!9;UBERON:0010011!3.31e-26!9;UBERON:0000454!3.31e-26!9;UBERON:0009663!7.45e-21!7;UBERON:0000200!5.71e-20!6;UBERON:0003076!1.60e-19!15;UBERON:0003057!1.60e-19!15;UBERON:0000025!2.42e-16!194;UBERON:0000349!2.86e-15!5;UBERON:0004732!6.19e-15!13;UBERON:0002298!2.01e-14!8;UBERON:0001871!4.53e-14!7;UBERON:0000369!1.12e-12!4;UBERON:0002435!1.12e-12!4;UBERON:0000204!1.12e-12!4;UBERON:0010082!1.12e-12!4;UBERON:0004733!2.15e-12!12;UBERON:0002028!2.15e-12!12;UBERON:0007277!2.15e-12!12;UBERON:0004111!3.00e-11!241;UBERON:0001872!6.20e-11!5;UBERON:0000988!9.16e-11!3;UBERON:0000483!1.43e-10!309;UBERON:0000064!1.68e-10!219;UBERON:0002771!1.74e-10!3;UBERON:0006331!2.24e-10!3;UBERON:0000119!2.29e-10!312;UBERON:0002240!4.76e-10!3;UBERON:0000477!4.85e-10!286;UBERON:0005383!9.10e-10!3;UBERON:0005382!9.10e-10!3;UBERON:0002680!8.40e-09!9;UBERON:0001895!8.40e-09!9;UBERON:0010092!8.40e-09!9;UBERON:0000475!1.56e-08!365;UBERON:0001870!7.38e-08!2;UBERON:0005162!7.62e-08!2;UBERON:0000122!7.62e-08!2;UBERON:0001897!1.33e-07!2;UBERON:0002148!1.56e-07!2;UBERON:0009662!1.56e-07!2;UBERON:0001873!4.56e-07!2;UBERON:0002360!4.56e-07!2;UBERON:0000094!4.56e-07!2;UBERON:0007645!4.56e-07!2;UBERON:0010122!4.56e-07!2;UBERON:0001875!4.70e-07!2;UBERON:0006514!4.70e-07!2;UBERON:0001876!4.85e-07!2;UBERON:0001954!5.48e-07!2;UBERON:0003022!5.48e-07!2;UBERON:0002421!5.48e-07!2;UBERON:0002600!5.48e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;7.60e-59;34!UBERON:0003528;2.13e-57;34!UBERON:0002020;2.13e-57;34!UBERON:0001869;4.54e-54;32!UBERON:0002791;8.36e-54;32!UBERON:0000073;5.81e-50;53!UBERON:0002616;5.81e-50;53!UBERON:0002780;1.40e-49;41!UBERON:0001890;1.40e-49;41!UBERON:0002619;1.41e-48;22!UBERON:0001950;3.33e-47;20!UBERON:0000956;1.54e-42;25!UBERON:0000203;1.54e-42;25!UBERON:0001017;1.53e-34;75!UBERON:0000955;4.66e-34;68!UBERON:0000125;2.28e-30;9!UBERON:0002308;2.28e-30;9!UBERON:0000200;2.00e-28;6!UBERON:0001016;3.13e-27;83!UBERON:0002420;5.14e-23;9!UBERON:0007245;5.14e-23;9!UBERON:0010009;5.14e-23;9!UBERON:0010011;5.14e-23;9!UBERON:0000454;5.14e-23;9!UBERON:0009663;3.99e-22;7!UBERON:0002298;1.78e-19;6!UBERON:0004732;7.02e-17;13!UBERON:0007023;6.75e-16;114!UBERON:0001872;2.26e-15;5!UBERON:0000988;7.43e-15;3!UBERON:0001870;9.39e-15;3!UBERON:0002240;6.46e-14;3!UBERON:0005174;6.46e-14;3!UBERON:0001137;6.46e-14;3!UBERON:0004733;1.79e-13;12!UBERON:0002028;1.79e-13;12!UBERON:0011216;4.78e-12;132!UBERON:0001871;6.18e-11;6!UBERON:0005162;1.14e-10;2!UBERON:0000122;1.14e-10;2!UBERON:0000369;1.45e-10;4!UBERON:0002435;1.45e-10;4!UBERON:0000204;1.45e-10;4!UBERON:0002771;1.70e-10;2!UBERON:0002702;1.92e-10;2!UBERON:0001897;2.60e-10;2!UBERON:0010225;2.60e-10;2!UBERON:0002148;3.68e-10;2!UBERON:0006331;3.68e-10;2!UBERON:0009662;3.68e-10;2!UBERON:0001875;1.32e-09;2!UBERON:0006514;1.32e-09;2!UBERON:0002021;3.14e-09;5!UBERON:0000349;1.52e-08;5!UBERON:0002680;1.75e-08;9!UBERON:0001895;1.75e-08;9!UBERON:0010314;2.78e-08;132!UBERON:0001896;3.83e-07;3!UBERON:0005290;3.83e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.77e-97,56;UBERON:0005068,1.77e-97,56;UBERON:0006241,1.77e-97,56;UBERON:0007135,1.77e-97,56;UBERON:0000073,2.50e-86,53;UBERON:0002616,2.50e-86,53;UBERON:0001017,3.98e-77,81;UBERON:0002780,4.19e-74,41;UBERON:0001890,4.19e-74,41;UBERON:0003080,4.19e-74,41;UBERON:0006240,4.19e-74,41;UBERON:0000955,6.66e-74,68;UBERON:0006238,6.66e-74,68;UBERON:0001016,6.67e-73,89;UBERON:0001893,1.80e-70,34;UBERON:0003528,3.39e-70,34;UBERON:0002020,3.39e-70,34;UBERON:0003075,9.79e-69,82;UBERON:0007284,9.79e-69,82;UBERON:0002346,3.17e-65,86;UBERON:0001869,1.08e-62,32;UBERON:0002791,2.19e-62,32;UBERON:0007023,3.68e-54,114;UBERON:0010371,9.80e-53,104;UBERON:0003056,2.90e-52,61;UBERON:0002619,1.19e-48,22;UBERON:0001950,2.78e-47,20;UBERON:0000956,1.32e-42,25;UBERON:0000203,1.32e-42,25;UBERON:0010314,1.70e-42,132;UBERON:0004121,7.93e-35,171;UBERON:0000924,7.93e-35,171;UBERON:0006601,7.93e-35,171;UBERON:0000125,2.38e-30,9;UBERON:0002308,2.38e-30,9;UBERON:0000200,2.53e-28,6;UBERON:0011216,2.10e-26,223;UBERON:0000025,1.92e-23,192;UBERON:0003076,3.42e-23,15;UBERON:0003057,3.42e-23,15;UBERON:0002420,5.15e-23,9;UBERON:0007245,5.15e-23,9;UBERON:0010009,5.15e-23,9;UBERON:0010011,5.15e-23,9;UBERON:0000454,5.15e-23,9;UBERON:0009663,4.84e-22,7;UBERON:0002298,1.47e-19,6;UBERON:0004111,3.05e-17,240;UBERON:0004732,6.86e-17,13;UBERON:0001872,2.39e-15,5;UBERON:0000988,6.31e-15,3;UBERON:0001870,8.36e-15,3;UBERON:0002240,6.92e-14,3;UBERON:0005174,6.92e-14,3;UBERON:0001137,6.92e-14,3;UBERON:0004733,1.74e-13,12;UBERON:0002028,1.74e-13,12;UBERON:0007277,1.74e-13,12;UBERON:0000483,6.45e-13,306;UBERON:0000119,1.02e-12,309;UBERON:0001871,5.87e-11,6;UBERON:0005162,1.09e-10,2;UBERON:0000122,1.09e-10,2;UBERON:0000369,1.53e-10,4;UBERON:0002435,1.53e-10,4;UBERON:0000204,1.53e-10,4;UBERON:0010082,1.53e-10,4;UBERON:0002771,2.01e-10,2;UBERON:0002702,2.01e-10,2;UBERON:0001897,2.42e-10,2;UBERON:0010225,2.42e-10,2;UBERON:0002148,3.06e-10,2;UBERON:0006331,3.06e-10,2;UBERON:0009662,3.06e-10,2;UBERON:0001875,1.51e-09,2;UBERON:0006514,1.51e-09,2;UBERON:0002021,2.93e-09,5;UBERON:0000349,1.46e-08,5;UBERON:0002680,1.75e-08,9;UBERON:0001895,1.75e-08,9;UBERON:0010092,1.75e-08,9;UBERON:0001896,3.66e-07,3;UBERON:0005290,3.66e-07,3;UBERON:0010096,3.66e-07,3 | |||
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|short_description=p2@LGI3 | |||
}} | }} |
Latest revision as of 10:17, 17 September 2015
Short description: | p2@LGI3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LGI3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000424267_5end |
EntrezGene: | LGI3 |
HGNC: | 18711 |
UniProt: | A5PLP2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data