FFCP PHASE1:Hg19::chr3:190580477..190580489,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=647309 | |EntrezGene=647309 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=40049 | |HGNC=40049 | ||
|TSSclassifier=strong | |||
|UniProt=G5E9I9,A6NCL1 | |UniProt=G5E9I9,A6NCL1 | ||
|association_with_transcript=-12bp_to_ENST00000456552,NM_001146686,uc011bsl.1_5end | |association_with_transcript=-12bp_to_ENST00000456552,NM_001146686,uc011bsl.1_5end | ||
|cluster_id=chr3:190580477..190580489,- | |||
|coexpression_cluster_id=C158 | |coexpression_cluster_id=C158 | ||
|description=CAGE_peak_2_at_GMNC_5end | |description=CAGE_peak_2_at_GMNC_5end | ||
|id=chr3:190580477..190580489,- | |id=chr3:190580477..190580489,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002564;1.40e-09;3!CL:0000515;2.38e-09;3!CL:0000056;3.22e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002564,1.40e-09,3;CL:0000515,3.83e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0006241;4.00e-09;3!UBERON:0003057;4.00e-09;3!UBERON:0006222;1.85e-07;1!CL:0000515;3.22e-07;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.55e-24!57;UBERON:0005068!3.55e-24!57;UBERON:0006241!3.55e-24!57;UBERON:0007135!3.55e-24!57;UBERON:0007023!3.62e-23!115;UBERON:0001017!6.10e-20!82;UBERON:0002616!1.30e-19!59;UBERON:0000955!1.31e-18!69;UBERON:0006238!1.31e-18!69;UBERON:0005743!1.77e-18!86;UBERON:0003075!5.94e-17!86;UBERON:0007284!5.94e-17!86;UBERON:0002780!6.87e-17!41;UBERON:0001890!6.87e-17!41;UBERON:0006240!6.87e-17!41;UBERON:0000073!9.14e-17!94;UBERON:0001016!9.14e-17!94;UBERON:0003080!2.54e-16!42;UBERON:0002346!1.05e-15!90;UBERON:0001893!5.41e-14!34;UBERON:0002020!6.21e-14!34;UBERON:0003528!6.21e-14!34;UBERON:0002791!3.60e-13!33;UBERON:0001869!7.98e-12!32;UBERON:0003056!4.81e-10!61;UBERON:0002619!1.85e-09!22;UBERON:0002298!1.94e-09!8;UBERON:0003076!3.14e-09!15;UBERON:0003057!3.14e-09!15;UBERON:0004121!3.80e-09!169;UBERON:0000475!3.84e-09!365;UBERON:0001950!7.62e-09!20;UBERON:0000924!1.16e-08!173;UBERON:0006601!1.16e-08!173;UBERON:0000153!1.54e-08!129;UBERON:0007811!1.54e-08!129;UBERON:0002308!2.28e-08!9;UBERON:0000125!2.28e-08!9;UBERON:0000033!3.21e-08!123;UBERON:0000956!5.61e-08!25;UBERON:0000203!5.61e-08!25;UBERON:0000025!1.11e-07!194;UBERON:0004733!2.06e-07!12;UBERON:0002028!2.06e-07!12;UBERON:0007277!2.06e-07!12;UBERON:0002417!7.62e-07!61;UBERON:0000916!7.62e-07!61 | |ontology_enrichment_uberon=UBERON:0001049!3.55e-24!57;UBERON:0005068!3.55e-24!57;UBERON:0006241!3.55e-24!57;UBERON:0007135!3.55e-24!57;UBERON:0007023!3.62e-23!115;UBERON:0001017!6.10e-20!82;UBERON:0002616!1.30e-19!59;UBERON:0000955!1.31e-18!69;UBERON:0006238!1.31e-18!69;UBERON:0005743!1.77e-18!86;UBERON:0003075!5.94e-17!86;UBERON:0007284!5.94e-17!86;UBERON:0002780!6.87e-17!41;UBERON:0001890!6.87e-17!41;UBERON:0006240!6.87e-17!41;UBERON:0000073!9.14e-17!94;UBERON:0001016!9.14e-17!94;UBERON:0003080!2.54e-16!42;UBERON:0002346!1.05e-15!90;UBERON:0001893!5.41e-14!34;UBERON:0002020!6.21e-14!34;UBERON:0003528!6.21e-14!34;UBERON:0002791!3.60e-13!33;UBERON:0001869!7.98e-12!32;UBERON:0003056!4.81e-10!61;UBERON:0002619!1.85e-09!22;UBERON:0002298!1.94e-09!8;UBERON:0003076!3.14e-09!15;UBERON:0003057!3.14e-09!15;UBERON:0004121!3.80e-09!169;UBERON:0000475!3.84e-09!365;UBERON:0001950!7.62e-09!20;UBERON:0000924!1.16e-08!173;UBERON:0006601!1.16e-08!173;UBERON:0000153!1.54e-08!129;UBERON:0007811!1.54e-08!129;UBERON:0002308!2.28e-08!9;UBERON:0000125!2.28e-08!9;UBERON:0000033!3.21e-08!123;UBERON:0000956!5.61e-08!25;UBERON:0000203!5.61e-08!25;UBERON:0000025!1.11e-07!194;UBERON:0004733!2.06e-07!12;UBERON:0002028!2.06e-07!12;UBERON:0007277!2.06e-07!12;UBERON:0002417!7.62e-07!61;UBERON:0000916!7.62e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0001897;3.06e-13;2!UBERON:0010225;3.06e-13;2!UBERON:0011135;2.64e-12;5!UBERON:0002216;2.64e-12;5!UBERON:0011134;2.64e-12;5!UBERON:0002209;2.64e-12;5!UBERON:0002213;2.64e-12;5!UBERON:0007844;2.64e-12;5!UBERON:0011138;2.64e-12;5!UBERON:0001130;2.64e-12;5!UBERON:0001066;2.64e-12;5!UBERON:0001468;2.64e-12;5!UBERON:0000073;6.11e-10;53!UBERON:0002616;6.11e-10;53!UBERON:0002298;6.27e-10;6!UBERON:0002242;1.40e-09;3!UBERON:0001896;2.38e-09;3!UBERON:0005290;2.38e-09;3!UBERON:0002240;4.00e-09;3!UBERON:0005174;4.00e-09;3!UBERON:0001137;4.00e-09;3!UBERON:0001894;1.95e-08;7!UBERON:0002780;3.00e-08;41!UBERON:0001890;3.00e-08;41!UBERON:0007195;5.05e-08;1!UBERON:0004905;7.33e-08;8!UBERON:0000982;7.33e-08;8!UBERON:0004770;7.33e-08;8!UBERON:0002336;8.27e-08;1!UBERON:0011215;8.27e-08;1!UBERON:0001018;8.27e-08;1!UBERON:0002473;8.27e-08;1!UBERON:0005340;8.27e-08;1!UBERON:0003544;8.27e-08;1!UBERON:0005970;8.27e-08;1!UBERON:0002316;8.27e-08;1!UBERON:0001020;8.27e-08;1!UBERON:0002437;8.27e-08;1!UBERON:0001301;1.85e-07;1!UBERON:0002784;4.75e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,6.96e-16,56;UBERON:0005068,6.96e-16,56;UBERON:0006241,6.96e-16,56;UBERON:0007135,6.96e-16,56;UBERON:0001897,1.54e-13,2;UBERON:0010225,1.54e-13,2;UBERON:0011135,2.54e-12,5;UBERON:0002216,2.54e-12,5;UBERON:0011134,2.54e-12,5;UBERON:0002209,2.54e-12,5;UBERON:0002213,2.54e-12,5;UBERON:0005856,2.54e-12,5;UBERON:0005866,2.54e-12,5;UBERON:0005863,2.54e-12,5;UBERON:0007844,2.54e-12,5;UBERON:0011138,2.54e-12,5;UBERON:0001130,2.54e-12,5;UBERON:0001066,2.54e-12,5;UBERON:0001468,2.54e-12,5;UBERON:0000073,5.99e-12,53;UBERON:0002616,5.99e-12,53;UBERON:0007023,8.92e-11,114;UBERON:0003076,3.09e-10,15;UBERON:0003057,3.09e-10,15;UBERON:0001017,3.99e-10,81;UBERON:0003075,3.99e-10,82;UBERON:0007284,3.99e-10,82;UBERON:0002298,5.55e-10,6;UBERON:0002242,1.40e-09,3;UBERON:0003068,1.40e-09,3;UBERON:0002328,1.40e-09,3;UBERON:0004880,1.40e-09,3;UBERON:0002346,1.51e-09,86;UBERON:0001896,1.89e-09,3;UBERON:0005290,1.89e-09,3;UBERON:0010096,1.89e-09,3;UBERON:0002240,3.26e-09,3;UBERON:0005174,3.26e-09,3;UBERON:0001137,3.26e-09,3;UBERON:0001016,6.79e-09,89;UBERON:0000955,9.09e-09,68;UBERON:0006238,9.09e-09,68;UBERON:0001894,1.61e-08,7;UBERON:0006222,1.61e-08,7;UBERON:0002780,2.32e-08,41;UBERON:0001890,2.32e-08,41;UBERON:0003080,2.32e-08,41;UBERON:0006240,2.32e-08,41;UBERON:0007195,4.89e-08,1;UBERON:0004905,7.17e-08,8;UBERON:0000982,7.17e-08,8;UBERON:0004770,7.17e-08,8;UBERON:0002336,7.76e-08,1;UBERON:0011215,7.76e-08,1;UBERON:0001018,7.76e-08,1;UBERON:0002473,7.76e-08,1;UBERON:0005340,7.76e-08,1;UBERON:0003544,7.76e-08,1;UBERON:0005970,7.76e-08,1;UBERON:0002316,7.76e-08,1;UBERON:0001020,7.76e-08,1;UBERON:0002437,7.76e-08,1;UBERON:0010371,1.71e-07,104;UBERON:0001301,2.17e-07,1;UBERON:0002784,3.38e-07,4;UBERON:0011216,5.16e-07,223;UBERON:0000025,8.04e-07,192 | |||
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| ||
|short_description=p2@GMNC | |short_description=p2@GMNC | ||
}} | }} |
Latest revision as of 10:13, 17 September 2015
Short description: | p2@GMNC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GMNC_5end |
Coexpression cluster: | C158_adrenal_gastric_temporal_parietal_duodenum_caudate_putamen |
Association with transcript: | -12bp_to_ENST00000456552, NM_001146686, uc011bsl.1_5end |
EntrezGene: | GMNC |
HGNC: | 40049 |
UniProt: | G5E9I9A6NCL1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nucleus pulposus cell of intervertebral disc | 1.40e-09 | 3 |
skeletal muscle myoblast | 3.83e-07 | 4 |