FFCP PHASE1:Hg19::chr2:45169024..45169033,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:45169024..45169033,+
|short_description=p12@SIX3
|description=CAGE_peak_12_at_SIX3_5end
|association_with_transcript=-3bp_to_NM_005413,uc002run.1_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6496 | |EntrezGene=6496 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10889 | |HGNC=10889 | ||
|TSSclassifier=strong | |||
|UniProt=O95343 | |UniProt=O95343 | ||
|association_with_transcript=-3bp_to_NM_005413,uc002run.1_5end | |||
|cluster_id=chr2:45169024..45169033,+ | |||
|coexpression_cluster_id=C1905 | |||
|description=CAGE_peak_12_at_SIX3_5end | |||
|id=chr2:45169024..45169033,+ | |||
|ontology_enrichment_celltype=CL:0002586!2.08e-09!3;CL:0000064!2.40e-09!3;CL:0005012!2.40e-09!3;CL:0000067!2.40e-09!3;CL:0002304!2.40e-09!3;CL:0000306!2.21e-07!4;CL:0002222!2.21e-07!4;CL:0002224!2.21e-07!4;CL:0000149!3.83e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000306;1.81e-09;4!CL:0002222;1.81e-09;4!CL:0002224;1.81e-09;4!CL:0000333;9.54e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,2.15e-09,4;CL:0002222,2.15e-09,4;CL:0002224,2.15e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0010122;5.36e-19;2!UBERON:0003056;1.45e-12;3 | |||
|ontology_enrichment_disease=DOID:171!9.86e-10!10;DOID:169!5.02e-08!6;DOID:5409!9.92e-07!4 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p12@SIX3 | |||
}} | }} |
Latest revision as of 09:38, 17 September 2015
Short description: | p12@SIX3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_SIX3_5end |
Coexpression cluster: | C1905_caudate_putamen_embryonic_pituitary_globus_cord_rhabdomyosarcoma |
Association with transcript: | -3bp_to_NM_005413, uc002run.1_5end |
EntrezGene: | SIX3 |
HGNC: | 10889 |
UniProt: | O95343 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 2.15e-09 | 4 |
vertebrate lens cell | 2.15e-09 | 4 |
lens epithelial cell | 2.15e-09 | 4 |