FFCP PHASE1:Hg19::chr11:2160369..2160383,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3481 | |EntrezGene=3481 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5466 | |HGNC=5466 | ||
|TSSclassifier=strong | |||
|UniProt=P01344 | |UniProt=P01344 | ||
|association_with_transcript=-165bp_to_ENST00000381406,NM_000612,uc001lvg.2_5end | |association_with_transcript=-165bp_to_ENST00000381406,NM_000612,uc001lvg.2_5end | ||
|cluster_id=chr11:2160369..2160383,- | |||
|coexpression_cluster_id=C172 | |coexpression_cluster_id=C172 | ||
|description=CAGE_peak_20_at_IGF2_5end | |description=CAGE_peak_20_at_IGF2_5end | ||
|id=chr11:2160369..2160383,- | |id=chr11:2160369..2160383,- | ||
|ontology_enrichment_celltype=CL:0000349;2.65e-13;19 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0000349;2.65e-13;19 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,3.12e-13,19 | |||
|ontology_enrichment_development_v019=UBERON:0003104;2.47e-10;31 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000478;2.09e-13;24!UBERON:0005631;2.87e-13;10!UBERON:0000158;2.87e-13;10!UBERON:0000922;9.53e-10;49!UBERON:0000305;1.39e-08;7!UBERON:0001987;5.12e-08;4!UBERON:0005409;1.90e-07;22!UBERON:0000160;5.99e-07;17!UBERON:0000077;8.45e-07;27 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.24e-16!115;UBERON:0005631!4.46e-14!14;UBERON:0000158!4.46e-14!14;UBERON:0004119!1.88e-11!169;UBERON:0000925!1.88e-11!169;UBERON:0006595!1.88e-11!169;UBERON:0000478!1.45e-09!24;UBERON:0000481!5.31e-09!347;UBERON:0004921!1.10e-08!129;UBERON:0004185!1.10e-08!129;UBERON:0003124!1.64e-08!7;UBERON:0000468!3.65e-08!659;UBERON:0001007!4.63e-08!155;UBERON:0001555!4.63e-08!155;UBERON:0007026!4.63e-08!155;UBERON:0000077!9.45e-08!130;UBERON:0004923!1.90e-07!57;UBERON:0005409!2.10e-07!35;UBERON:0000305!3.25e-07!7;UBERON:0000160!3.99e-07!27;UBERON:0000062!4.45e-07!511;UBERON:0001046!4.97e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;2.09e-13;24!UBERON:0005631;2.87e-13;10!UBERON:0000158;2.87e-13;10!UBERON:0000922;9.53e-10;49!UBERON:0000305;1.39e-08;7!UBERON:0001987;5.12e-08;4!UBERON:0005409;1.90e-07;22!UBERON:0000160;5.99e-07;17!UBERON:0000077;8.45e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.93e-19,14;UBERON:0000158,1.93e-19,14;UBERON:0000478,2.42e-13,24;UBERON:0003124,7.55e-13,7;UBERON:0000305,1.71e-08,7;UBERON:0004119,1.79e-08,160;UBERON:0000925,1.79e-08,160;UBERON:0006595,1.79e-08,160;UBERON:0004923,2.05e-08,66;UBERON:0001987,5.13e-08,4;UBERON:0004340,5.13e-08,4;UBERON:0004871,2.67e-07,8;UBERON:0005409,2.69e-07,25;UBERON:0001046,3.43e-07,19;UBERON:0007023,6.16e-07,114;UBERON:0000160,6.33e-07,17 | |||
|phase1_expression=2.36181893051724,0.642301571672949,0.140954404095971,2.00146596706261,2.68176656656373,0,0,0,0,0.737201809504527,0.697801167972428,5.67947567538448,31.388270409186,0.123766352960047,0.662794751455832,0,0,0,0,0.246242116153576,0.612002073732759,1.25381888591235,0,0,0,0,0,0,0,0,3.56077083626975,0,0,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869079113764942,0,0,0,0,0,0.654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0,0.66944122552934,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0.560677600142307,0,0,0,0.134710672069688,0,7.87058623753643,9.79499071615998,0,0,0,0,0,0,0,0,0,0,7.12801714369232,3.4617370098998,0,0,0,0.250237039743928,0,0,0,1.20190447125277,0,0,0.427114777637135,0,0,0,0,0,0,0,0,0.0920498986422993,0.161646056818812,0,0,0,0,0,0,0,0,2.5562667431294,1.0366105501537,0.504641701751257,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,2.94017422771084,0,0,1.77236972004421,0,24.7206761471658,0,0.109750285408626,0,0,0.277765335475589,0.325808305310325,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0.112131084345361,3.48768055066624,0,0,0,0,0.797814349754612,1.04007436911366,0,0,0,0.428933980974443,37.4408907720096,0.823240336780769,0,0.710783897485092,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0.61642896765115,0.179060963239896,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,1.50051156317903,1.08506009479894,0.207970861530807,0,0,0.234282829985426,7.52365249319297,4.5481500811197,11.3820378421755,0,0.184369168541703,0,102.795607667939,106.031317957554,0,0,0,69.7193414326397,58.252403828674,46.2657148794411,0.248107807818777,0,0,0,1.02341449813341,0.160853921143607,0,0,0,0,0.519254429183621,0,104.785142795936,0.601519410909855,0.184161977871793,0.114814448164607,0,1.04899531967539,0,0,0,0,0,0,0.170093705276516,0,4.62681758070868,0.270946437543853,0,0,0,0,0.219259876645935,0,0,0.328014645699706,0,24.8328838071011,0,0,0,0,0,2.32009723901093,0.154048617114644,0,0,0,0.580066775656914,0.0852266274161009,11.8412607410161,0.495854746082934,1.34533047155574,0,0.6069466851333,0,0,0,0,0,0,0,0.143124886741991,0.372158369359667,1.2655176988749,0.38126038784765,0,2.1396949401696,0,0,0.359744915166629,0,0.117812402345686,0,0,0,0.975267478179181,0,0,2.18399858252777,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0.379473173765715,1.39973888097993,0.0962221127255121,0.670302275535787,0,26.5485518190517,3.87454835404107,1.68471475667626,1.7737206141467,0.918893600827838,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46174797895425,0,0,0,0,7.76493350141038,0,0,0,84.0380586276669,166.59718594711,61.4321404198464,0,0,0,0,0.211125408127993,0.597743964753209,3.31540698637377,0.251932747854276,0,0,0,0,0,0,3.45251919729268,0,0,1.93866549219044,0.463840490809256,0,0,0,19.5749885367394,0,0,0,0,0,0,0.885741385813839,0,0,0.110579259931225,0,1.75508317723178,0,0,8.38757817691388,0,21.6730070124777,0,0,64.7572354255797,30.3188034160164,539.431193330858,0,0,0,0,0,0,0,0,0,0,2.26164914294305,0,0,4.42287822516696,54.3816828990927,0,0,0,0.134802265961354,70.6268329622934,0.234264445725339,0,0.19566461893209,0,0.394584402849391,19.3585145677862,0.30607276163049,2.52746318513952,0,0,0.664653872707185,0.330991955875499,0.313932918407225,0,0,0,0,0.0979923974143777,0,27.7815402504828,0,0,0,0,1.45483524732629,0.264768380074501,4.06765333404958,0,0,0,0.195551382734803,0,0.213452994739353,5.79447867788178,0,0,74.3006340742307,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,3.89572720819862,5.74298419661451,1.39775300349294,0.429226048136571,5.13294352116307,4.50129265661066,0,0,10.3993800645535,11.0437250230763,13.480708770837,9.25218326238639,0,0,0,0,0,0,0,0,0,0,1.33969702408637,3.30463905250488,0,0,0,13.579211201094,7.94510364438518,0,0,0,0,0,0,0,0,1.75862680413699,186.834713366232,0,0,0,0,0.854299300541557,2.82967749179399,0.828478110694391,0.496166021811951,0,0,0,2.72008901684737,6.0165574565448,1.83807346058077,2.29510841496863,0,0,0,0,1.14681839138014,0.443716206147409,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40016658797892,0,0,2.52369796457302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,1.70254786070051,0,0,4.97661808026378,0,0,0,0.327628914576042,0,0,0,0,0.318004350653419,0,0,1.76337971845342,0.3062454773532,0,0,0,0.205116364240755,0.504143392443436,0,0,8.56616521554926,0,0,0,0,0,0,4.37615688655804,8.19792579006904,0,0.781514011233092,0,0,0,0,0.781078098613847,0.206686796501184,0.126831620387814,1.09394961803644,0.548257766857182,0.992422356778588,0,0,0.535701835878287,0,1.82089681270989,1.13831095675649,60.3176117105944,0,0,0,0,0,0,1.56986185701028,0,16.2557854721998,7.30526976407596,0,0,2.287249413653,0,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| ||
|short_description=p20@IGF2 | |short_description=p20@IGF2 | ||
}} | }} |
Latest revision as of 08:42, 17 September 2015
Short description: | p20@IGF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_IGF2_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | -165bp_to_ENST00000381406, NM_000612, uc001lvg.2_5end |
EntrezGene: | IGF2 |
HGNC: | 5466 |
UniProt: | P01344 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 3.12e-13 | 19 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.93e-19 | 14 |
membranous layer | 1.93e-19 | 14 |
extraembryonic structure | 2.42e-13 | 24 |
chorion | 7.55e-13 | 7 |
amnion | 1.71e-08 | 7 |
endoderm-derived structure | 1.79e-08 | 160 |
endoderm | 1.79e-08 | 160 |
presumptive endoderm | 1.79e-08 | 160 |
organ component layer | 2.05e-08 | 66 |
placenta | 5.13e-08 | 4 |
allantois | 5.13e-08 | 4 |
somatic layer of lateral plate mesoderm | 2.67e-07 | 8 |
gastrointestinal system | 2.69e-07 | 25 |
hindgut | 3.43e-07 | 19 |
adult organism | 6.16e-07 | 114 |
intestine | 6.33e-07 | 17 |