FFCP PHASE1:Hg19::chr20:58411232..58411249,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=116154 | |EntrezGene=116154 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15833 | |HGNC=15833 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=165bp_to_uc002yay.2_5end | |association_with_transcript=165bp_to_uc002yay.2_5end | ||
|cluster_id=chr20:58411232..58411249,+ | |||
|coexpression_cluster_id=C4057 | |||
|description=CAGE_peak_15_at_PHACTR3_5end | |description=CAGE_peak_15_at_PHACTR3_5end | ||
|id=chr20:58411232..58411249,+ | |id=chr20:58411232..58411249,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002327;1.50e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,1.44e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0005425;5.97e-34;1!UBERON:0009847;1.96e-12;3!UBERON:0003353;1.96e-12;3!UBERON:0003056;2.74e-12;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.94e-19!57;UBERON:0005068!4.94e-19!57;UBERON:0006241!4.94e-19!57;UBERON:0007135!4.94e-19!57;UBERON:0003076!5.79e-19!15;UBERON:0003057!5.79e-19!15;UBERON:0007023!8.93e-16!115;UBERON:0005743!7.89e-14!86;UBERON:0000073!1.41e-13!94;UBERON:0001016!1.41e-13!94;UBERON:0004732!1.99e-13!13;UBERON:0001017!3.24e-13!82;UBERON:0002240!1.49e-12!3;UBERON:0003075!1.53e-12!86;UBERON:0007284!1.53e-12!86;UBERON:0002616!2.31e-12!59;UBERON:0001896!6.20e-12!3;UBERON:0005290!6.20e-12!3;UBERON:0010096!6.20e-12!3;UBERON:0002346!8.75e-12!90;UBERON:0002298!2.06e-11!8;UBERON:0000955!2.42e-11!69;UBERON:0006238!2.42e-11!69;UBERON:0004733!1.19e-10!12;UBERON:0002028!1.19e-10!12;UBERON:0007277!1.19e-10!12;UBERON:0004121!1.20e-10!169;UBERON:0000924!2.95e-10!173;UBERON:0006601!2.95e-10!173;UBERON:0000007!1.66e-09!2;UBERON:0005162!4.53e-09!2;UBERON:0000122!4.53e-09!2;UBERON:0001876!5.98e-09!2;UBERON:0000153!1.13e-08!129;UBERON:0007811!1.13e-08!129;UBERON:0005174!1.07e-07!5;UBERON:0001137!1.07e-07!5;UBERON:0000033!2.46e-07!123;UBERON:0002780!3.33e-07!41;UBERON:0001890!3.33e-07!41;UBERON:0006240!3.33e-07!41;UBERON:0005153!3.61e-07!37;UBERON:0004111!3.82e-07!241;UBERON:0000475!4.73e-07!365;UBERON:0000025!5.29e-07!194;UBERON:0003080!5.40e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;5.53e-66;2!UBERON:0000941;5.97e-34;1!UBERON:0001785;5.97e-34;1!UBERON:0002464;5.97e-34;1!UBERON:0004904;5.97e-34;1!UBERON:0001021;5.97e-34;1!UBERON:0003296;1.17e-33;4!UBERON:0010133;1.17e-33;4!UBERON:0001894;9.48e-20;7!UBERON:0003714;9.86e-18;2!UBERON:0005162;9.86e-18;2!UBERON:0000122;9.86e-18;2!UBERON:0001911;1.50e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,5.53e-66,2;UBERON:0000941,7.06e-34,1;UBERON:0001785,7.06e-34,1;UBERON:0002464,7.06e-34,1;UBERON:0004904,7.06e-34,1;UBERON:0001021,7.06e-34,1;UBERON:0003902,7.06e-34,1;UBERON:0005425,7.06e-34,1;UBERON:0003296,1.17e-33,4;UBERON:0010133,1.17e-33,4;UBERON:0001894,9.49e-20,7;UBERON:0006222,9.49e-20,7;UBERON:0003714,1.07e-17,2;UBERON:0005162,1.07e-17,2;UBERON:0000122,1.07e-17,2;UBERON:0001911,1.44e-09,4;UBERON:0005333,1.44e-09,4;UBERON:0008425,1.44e-09,4;UBERON:0005311,1.44e-09,4;UBERON:0001781,1.57e-09,4;UBERON:0002530,1.63e-09,59;UBERON:0000966,8.97e-07,6;UBERON:0005388,8.97e-07,6;UBERON:0001802,8.97e-07,6 | |||
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| ||
|short_description=p15@PHACTR3 | |short_description=p15@PHACTR3 | ||
}} | }} |
Latest revision as of 08:07, 17 September 2015
Short description: | p15@PHACTR3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_PHACTR3_5end |
Coexpression cluster: | C4057_prostate_smallcell_Mammary_mucinous_pituitary_Keratinocyte_bile |
Association with transcript: | 165bp_to_uc002yay.2_5end |
EntrezGene: | PHACTR3 |
HGNC: | 15833 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 1.44e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 5.53e-66 | 2 |
cranial nerve II | 7.06e-34 | 1 |
cranial nerve | 7.06e-34 | 1 |
nerve trunk | 7.06e-34 | 1 |
nerve connecting eye with brain | 7.06e-34 | 1 |
nerve | 7.06e-34 | 1 |
retinal neural layer | 7.06e-34 | 1 |
presumptive neural retina | 7.06e-34 | 1 |
gland of diencephalon | 1.17e-33 | 4 |
neuroendocrine gland | 1.17e-33 | 4 |
diencephalon | 9.49e-20 | 7 |
future diencephalon | 9.49e-20 | 7 |
neural tissue | 1.07e-17 | 2 |
multi cell component structure | 1.07e-17 | 2 |
neuron projection bundle | 1.07e-17 | 2 |
mammary gland | 1.44e-09 | 4 |
mammary bud | 1.44e-09 | 4 |
mammary ridge | 1.44e-09 | 4 |
mammary placode | 1.44e-09 | 4 |
layer of retina | 1.57e-09 | 4 |
gland | 1.63e-09 | 59 |
retina | 8.97e-07 | 6 |
photoreceptor array | 8.97e-07 | 6 |
posterior segment of eyeball | 8.97e-07 | 6 |