FFCP PHASE1:Hg19::chr1:153599706..153599730,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6284 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10490 | |||
|TSSclassifier=strong | |||
|UniProt=Q99584 | |||
|association_with_transcript=13bp_to_ENST00000392623,NM_001024212,uc001fcg.2,uc009woh.2_5end | |||
|cluster_id=chr1:153599706..153599730,- | |||
|description=CAGE_peak_6_at_S100A13_5end | |||
|id=chr1:153599706..153599730,- | |||
|ontology_enrichment_celltype=CL:0000055!7.36e-22!180;CL:0000220!3.69e-13!246;CL:0002321!7.09e-13!248;CL:0000183!4.07e-12!59;CL:0000680!2.16e-11!57;CL:0000056!2.16e-11!57;CL:0000355!2.16e-11!57;CL:0000359!2.07e-10!32;CL:0000187!3.60e-10!54;CL:0000057!1.56e-09!75;CL:0000192!2.00e-09!42;CL:0000514!2.00e-09!42;CL:0000066!5.33e-09!254;CL:1000497!1.20e-08!18;CL:0002518!1.20e-08!18;CL:0000393!3.60e-08!60;CL:0000211!3.60e-08!60;CL:0000222!8.29e-08!119;CL:1000449!1.04e-07!16;CL:0000499!1.71e-07!27;CL:1000507!8.92e-07!12;CL:1000494!8.92e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000359;8.67e-12;32!CL:1000497;4.83e-10;17!CL:0002518;4.83e-10;17!CL:1000507;4.61e-09;10!CL:1000494;4.61e-09;10!CL:1000449;6.10e-09;15!CL:0002681;5.17e-07;12!CL:0002584;5.17e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,4.63e-12,32;CL:1000497,5.09e-10,17;CL:0002518,5.09e-10,17;CL:0000680,1.33e-09,58;CL:0000056,1.33e-09,58;CL:0000355,1.33e-09,58;CL:1000507,4.48e-09,10;CL:1000494,4.48e-09,10;CL:1000449,6.76e-09,15;CL:0002321,9.01e-09,250;CL:0000192,1.21e-08,43;CL:0000514,1.21e-08,43;CL:0000187,2.53e-08,55;CL:0000057,2.78e-08,76;CL:0002681,5.95e-07,12;CL:0002584,5.95e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:193!2.57e-07!29;DOID:120!5.06e-07!27 | |||
|ontology_enrichment_disease_v019=DOID:193;1.31e-07;29!DOID:120;3.22e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:193,1.34e-07,29;DOID:120,3.05e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0000475!1.88e-17!365;UBERON:0000914!7.75e-16!83;UBERON:0002329!7.75e-16!83;UBERON:0003077!7.75e-16!83;UBERON:0003059!7.75e-16!83;UBERON:0007282!7.75e-16!83;UBERON:0009618!7.75e-16!83;UBERON:0007285!7.75e-16!83;UBERON:0000486!1.49e-15!82;UBERON:0002100!3.48e-15!216;UBERON:0004290!7.42e-14!70;UBERON:0005256!9.43e-13!143;UBERON:0000481!2.65e-12!347;UBERON:0003104!4.51e-12!238;UBERON:0009142!4.51e-12!238;UBERON:0001134!2.45e-10!61;UBERON:0002036!2.45e-10!61;UBERON:0003082!2.45e-10!61;UBERON:0000468!5.10e-10!659;UBERON:0002385!6.41e-10!63;UBERON:0001015!6.41e-10!63;UBERON:0000383!6.41e-10!63;UBERON:0003886!5.24e-09!63;UBERON:0000467!9.11e-09!625;UBERON:0000480!1.45e-08!626;UBERON:0003133!3.96e-08!48;UBERON:0002553!4.81e-08!70;UBERON:0000464!5.25e-08!104;UBERON:0002113!7.24e-08!27;UBERON:0003918!7.24e-08!27;UBERON:0005095!7.24e-08!27;UBERON:0007687!7.24e-08!27;UBERON:0000119!7.66e-08!312;UBERON:0004211!1.04e-07!16;UBERON:0001285!1.04e-07!16;UBERON:0007684!1.04e-07!16;UBERON:0003220!1.04e-07!16;UBERON:0004208!1.04e-07!16;UBERON:0002097!1.21e-07!40;UBERON:0003134!1.33e-07!37;UBERON:0000474!1.33e-07!37;UBERON:0006555!1.55e-07!17;UBERON:0005103!1.55e-07!17;UBERON:0000083!1.55e-07!17;UBERON:0009201!1.55e-07!17;UBERON:0004819!1.55e-07!17;UBERON:0006553!1.55e-07!17;UBERON:0003074!1.55e-07!17;UBERON:0003060!1.55e-07!17;UBERON:0003100!1.83e-07!41;UBERON:0003103!2.35e-07!69;UBERON:0000064!2.43e-07!219;UBERON:0003102!2.69e-07!95;UBERON:0000080!2.70e-07!18;UBERON:0002120!2.70e-07!18;UBERON:0004875!2.70e-07!18;UBERON:0005721!2.70e-07!18;UBERON:0005754!2.70e-07!18;UBERON:0007297!2.70e-07!18;UBERON:0005156!2.72e-07!59;UBERON:0000990!2.72e-07!59;UBERON:0002199!2.76e-07!45;UBERON:0002416!2.76e-07!45;UBERON:0000483!3.63e-07!309;UBERON:0004876!5.94e-07!20;UBERON:0009773!8.92e-07!12;UBERON:0001231!8.92e-07!12;UBERON:0004810!8.92e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;2.27e-09;24!UBERON:0011143;2.27e-09;24!UBERON:0004211;4.61e-09;10!UBERON:0009773;4.61e-09;10!UBERON:0001231;4.61e-09;10!UBERON:0004810;4.61e-09;10!UBERON:0006555;6.10e-09;15!UBERON:0004819;6.10e-09;15!UBERON:0001285;6.10e-09;15!UBERON:0007684;6.10e-09;15!UBERON:0006554;2.95e-07;30!UBERON:0001008;2.95e-07;30!UBERON:0001225;5.17e-07;12!UBERON:0008987;5.17e-07;12!UBERON:0000489;6.33e-07;29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.08e-14,78;UBERON:0000486,1.23e-13,83;UBERON:0002329,8.53e-13,71;UBERON:0003059,8.53e-13,71;UBERON:0007282,8.53e-13,71;UBERON:0004290,8.53e-13,71;UBERON:0009618,8.53e-13,71;UBERON:0007524,1.97e-12,73;UBERON:0003077,2.38e-12,72;UBERON:0007285,2.38e-12,72;UBERON:0002100,4.62e-12,199;UBERON:0003104,2.59e-09,160;UBERON:0009142,2.59e-09,160;UBERON:0004810,4.48e-09,10;UBERON:0001134,5.39e-09,62;UBERON:0002036,5.39e-09,62;UBERON:0003082,5.39e-09,62;UBERON:0004211,6.76e-09,15;UBERON:0009773,6.76e-09,15;UBERON:0001231,6.76e-09,15;UBERON:0001285,6.76e-09,15;UBERON:0007684,6.76e-09,15;UBERON:0004208,6.76e-09,15;UBERON:0002113,1.14e-08,26;UBERON:0003918,1.14e-08,26;UBERON:0011143,1.14e-08,26;UBERON:0005095,1.14e-08,26;UBERON:0007687,1.14e-08,26;UBERON:0006555,1.14e-08,16;UBERON:0004819,1.14e-08,16;UBERON:0002385,2.91e-08,64;UBERON:0001015,2.91e-08,64;UBERON:0000383,2.91e-08,64;UBERON:0002097,3.72e-07,41;UBERON:0001225,5.95e-07,12;UBERON:0008987,5.95e-07,12;UBERON:0002199,8.09e-07,46;UBERON:0002416,8.09e-07,46 | |||
|phase1_expression=5.26867299884614,1.2846031433459,2.67813367782345,6.00439790118782,2.68176656656373,6.10636966870258,0,1.26343974685366,0.522371256399677,0.245733936501509,3.48900583986214,2.40285509343189,4.48403862988371,2.59909341216098,4.63956326019082,3.36162573225888,2.41077811209591,5.11217063271161,2.43966399395253,14.4051637949842,15.9120539170517,6.26909442956176,1.43117993565528,2.73748850145768,1.38096903554283,0,0,0,0,0,0.309632246632152,4.59710612239464,4.51808878167375,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,1.53435074212236,1.0843174571537,3.50936537445123,1.15877215168659,0.795285947051099,0.973269740605272,4.34860158954712,3.99112915432615,3.33772185633879,0.982343066232845,5.82872461268068,5.93255108455087,0,0,0,0,0,0,0.39752481473341,0,0.694281003215189,1.13061588384802,0.419499436209906,0,0,1.29208379584664,0.71153252537342,0,1.20848795132744,0,0.732186172644509,0.367663080345869,0,0,0,0,0,0,0,0,0,1.3082821564276,8.94549513051573,2.40597972162702,0.529636723252875,0.573673241497627,1.06400514659507,2.24271040056923,0,2.4666754841716,0,0.67355336034844,1.14423332179421,4.23800797405808,5.18558332031999,0.468642863667593,2.49728061464256,2.85235910772225,2.69007624993242,5.63685593490071,5.82742599725274,7.02254033511243,1.22492502752936,1.47401180774122,1.13658359293342,0,0.989067717114227,1.82032272387605,1.43723628363248,0.673344455816265,0.375355559615893,1.38532057742091,3.95079858792754,3.98434134538726,3.00476117813194,0.907457465280168,0.89694817844431,2.13557388818567,3.17897851739343,3.00091096084402,1.95799805553034,2.57640540045629,4.83903826462134,0.843881661206331,2.33848812386877,1.7670364197088,1.84099797284599,1.2931684545505,1.77504796258307,5.94437379543078,0.847802961552438,10.0495643644914,2.45471508531751,3.72845974005705,0.121973706129595,0.265059536642971,0.232387885739037,0.414644220061482,0.252320850875628,0.36497735907583,43.8058690523485,66.8970575720601,51.1099209004178,5.10804720835177,10.8281922250438,2.24782920075703,1.34867752062481,1.68707720918437,3.08823123650703,2.17879444092406,1.18635309555548,4.44943316928543,2.74710051175484,0.769494313892781,0,1.40241773803446,3.7041661019826,2.94017422771084,0,0,0,0,0.245976877086227,4.80389868835872,1.64625428112938,2.24803506515239,1.00528972411631,0.648119116109707,0,3.11980435583874,10.1031939417691,1.73895607462615,1.99594780200897,0.144366447761074,0.925971025153221,0.190254152234598,0.790204397959275,0,0,0,0,15.9347517777521,3.19166043577833,2.26840155587818,3.04498977189684,0.581267877027924,1.91691339582606,0,0,0,0,0,0.253991577168676,0.763976851116555,1.17217447210047,0,0.822619941626588,2.10240140490742,0,11.1009773501907,3.48768055066624,11.1474194447844,0.517086863031111,7.15312891703765,4.22651376278,1.86156681609409,1.04007436911366,0.257207374262142,0,1.8649552531127,0,0.542621605391443,0.823240336780769,3.58309802723109,0.355391948742546,0.791951872933429,1.80863626235752,2.61460037580088,1.09970290300263,0,0,0,3.59437283237374,4.59447743336456,7.13184525203592,5.64647096003559,4.72595541865882,7.34149949283572,0,0,0,0,0.508189248444927,1.30139853857622,0,0,0.637938751653163,0,0,0,1.47229790062968,2.50085260529839,1.89885516589815,2.70362119990049,6.0665856191035,4.57337003598411,3.27995961979597,3.31040709700491,0,1.03473071292505,1.99267679560631,3.31864503375066,1.91143951829782,15.859893754482,12.01001983338,0,0,0,13.9438682865279,13.3148351608398,13.3051729065059,5.95458738765064,2.14846762603287,6.45518217196069,5.50998341799514,2.04682899626681,2.73451665944133,13.3576259800492,2.00472601943452,2.66342587969691,3.94210348866284,0.519254429183621,5.92672930145792,0.362578348774867,4.81215528727884,1.47329582297434,0.459257792658427,0.364182336013434,1.83574180943194,14.8895872259446,15.8651594435094,18.8243944602445,11.6911379722609,4.64427167128653,1.13733384070897,0.850468526382578,4.96606607034921,4.62681758070868,11.6506968143857,26.5895580143072,14.2730712905221,17.4525961875032,19.4771036608295,0,0,0.256450125116389,0.328014645699706,0,0.206082023295445,3.84591752237042,2.47528499761764,1.14853107599234,0.650060246036521,1.6068392984416,0.870036464629098,1.3864375540318,2.45605879561807,1.92971201478343,0.859361958946189,1.30515024522806,1.61930592090592,0.890320356467374,1.15699440752685,0.768760269460425,0.510450849978337,1.11273558941105,2.78907329578371,1.25924938732256,4.1822236209636,4.62050370264133,6.91997839412128,6.08953094452551,4.633105477598,4.00749682877575,8.18748412591268,3.16379424718726,1.33441135746677,3.07077349573601,0.42793898803392,3.5002357271853,3.13979456079692,0.359744915166629,0.54907405947211,0.589062011728432,11.3222189681057,4.75530963519025,12.2164952309305,0.48763373908959,5.60541026151954,10.5650146756755,0.9554993798559,0.424216295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| |||
|short_description=p6@S100A13 | |||
}} |
Latest revision as of 06:42, 17 September 2015
Short description: | p6@S100A13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_S100A13_5end |
Coexpression cluster: | NA |
Association with transcript: | 13bp_to_ENST00000392623, NM_001024212, uc001fcg.2, uc009woh.2_5end |
EntrezGene: | S100A13 |
HGNC: | 10490 |
UniProt: | Q99584 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 4.63e-12 | 32 |
kidney cell | 5.09e-10 | 17 |
kidney epithelial cell | 5.09e-10 | 17 |
muscle precursor cell | 1.33e-09 | 58 |
myoblast | 1.33e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.33e-09 | 58 |
kidney tubule cell | 4.48e-09 | 10 |
nephron tubule epithelial cell | 4.48e-09 | 10 |
epithelial cell of nephron | 6.76e-09 | 15 |
embryonic cell | 9.01e-09 | 250 |
smooth muscle cell | 1.21e-08 | 43 |
smooth muscle myoblast | 1.21e-08 | 43 |
muscle cell | 2.53e-08 | 55 |
fibroblast | 2.78e-08 | 76 |
kidney cortical cell | 5.95e-07 | 12 |
renal cortical epithelial cell | 5.95e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
reproductive organ cancer | 1.34e-07 | 29 |
female reproductive organ cancer | 3.05e-07 | 27 |