FFCP PHASE1:Hg19::chr11:2017862..2017869,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=4713 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-61bp_to_ENST00000436715_5end | |||
|cluster_id=chr11:2017862..2017869,- | |||
|coexpression_cluster_id=C227 | |||
|description=CAGE_peak_28_at_H19_5end | |||
|id=chr11:2017862..2017869,- | |||
|ontology_enrichment_celltype=CL:0000188!7.79e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.95e-19;19!CL:0002577;2.72e-09;3!CL:0002541;3.20e-09;3!CL:0000669;7.82e-07;4!CL:0002536;8.32e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.12e-19,19;CL:0002577,2.73e-09,3;CL:0002541,3.77e-09,3;CL:0000669,7.99e-07,4;CL:0002536,8.10e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.73e-07;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!6.98e-14!14;UBERON:0000158!6.98e-14!14;UBERON:0001737!1.01e-12!9;UBERON:0000478!4.57e-12!24;UBERON:0001557!8.11e-12!19;UBERON:0004923!1.72e-11!57;UBERON:0003104!6.86e-11!238;UBERON:0009142!6.86e-11!238;UBERON:0003124!2.62e-10!7;UBERON:0000481!5.91e-09!347;UBERON:0004119!7.20e-09!169;UBERON:0000925!7.20e-09!169;UBERON:0006595!7.20e-09!169;UBERON:0004457!8.07e-09!12;UBERON:0000042!8.07e-09!12;UBERON:0000077!9.14e-09!130;UBERON:0000064!4.78e-08!219;UBERON:0004921!8.86e-08!129;UBERON:0004185!8.86e-08!129;UBERON:0001041!1.37e-07!98;UBERON:0002100!1.45e-07!216;UBERON:0000926!1.85e-07!448;UBERON:0004120!1.85e-07!448;UBERON:0006603!1.85e-07!448;UBERON:0009569!3.66e-07!113;UBERON:0001007!5.26e-07!155;UBERON:0001555!5.26e-07!155;UBERON:0007026!5.26e-07!155;UBERON:0000072!8.25e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;8.18e-24;9!UBERON:0001557;8.18e-24;9!UBERON:0000478;5.54e-20;24!UBERON:0005631;1.44e-17;10!UBERON:0000158;1.44e-17;10!UBERON:0001987;1.76e-11;4!UBERON:0000305;1.77e-10;7!UBERON:0003124;3.20e-09;3!UBERON:0000920;3.20e-09;3!UBERON:0001134;9.63e-09;16!UBERON:0002036;9.63e-09;16!UBERON:0001723;1.06e-08;3!UBERON:0001033;1.06e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.06e-27,14;UBERON:0000158,4.06e-27,14;UBERON:0001737,8.45e-24,9;UBERON:0001557,1.27e-21,19;UBERON:0000478,5.87e-20,24;UBERON:0003124,5.59e-19,7;UBERON:0001987,1.54e-11,4;UBERON:0004340,1.54e-11,4;UBERON:0000305,1.72e-10,7;UBERON:0000920,3.77e-09,3;UBERON:0004871,4.12e-09,8;UBERON:0001041,5.54e-09,87;UBERON:0001723,9.33e-09,3;UBERON:0001033,9.33e-09,3;UBERON:0010056,9.33e-09,3;UBERON:0000072,4.92e-08,47;UBERON:0004923,1.04e-07,66 | |||
|phase1_expression=0.54503513781167,0.428201047781966,0.422863212287913,3.00219895059391,0.893922188854576,2.61701557230111,0,0,0,0.982935746006035,1.39560233594486,10.9220686065086,8.96807725976742,1.48519623552056,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.511450247374121,0,0,0,0.795285947051099,2.43317435151318,0.0945348171640679,0,0,0.130979075497713,1.09288586487763,2.22470665670658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80338800071154,0,0,1.55605517699883,0,0,0,0,0.468642863667593,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0,0,0,0,0,0,0.348581828608555,0.10366105501537,0,0,0,0,0,0,0,7.21671480243048,7.24914167335837,6.50729780685401,4.74264082749294,7.40790109914181,6.64357733511071,6.20224017536756,4.31687223275761,7.31019598198142,0,1.40241773803446,4.5273141246454,5.88034845542168,0,0,0,0,0,0.171567810298526,0,0,0,1.20364978706088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857867961948885,26.0458370587893,0.823240336780769,0,1.06617584622764,0.791951872933429,0,0,0,0,0,0,0,0,0,0.868687840005475,1.64381058040307,2.50685348535854,0,0,0,0,0,0,0,0,0,0,0,0,1.59498939234882,0.500170521059677,0,0,0,0,0,0.300946099727719,0,0,0,0.553107505625109,0,5.09083009403126,11.3237329857582,0,0,0,8.79069957194152,28.2940247167845,4.5358543999452,2.48107807818777,0.153461973288062,0.841980283299221,0.768834895534206,0.511707249066704,0.482561763430822,10.3892646511494,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0.170093705276516,0,3.08454505380579,0.541892875087706,3.01013864312912,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,1.35339005608971,0.462145851343933,0.767518373630648,0.137836572484531,0.429680979473094,1.16013355131383,0.170453254832202,2.67096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632758849437452,0,0,0.42793898803392,0,0,0,0,0,0,0,0,1.95053495635836,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0.573645408816206,2.94747123039363,0,0,0.211107635297664,0.329294892959902,0.75894634753143,1.39973888097993,0.192444225451024,0,0,0.470719003883896,0.43050537267123,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,28.4105936837851,21.38145701995,41.1595340812971,0,0,0,0,0,0,0,2.51932747854276,0,0,0,0,0,0,0.690503839458535,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,1.79515288819544,1.95565269459615,18.8210684241832,2.10674464824283,37.3124343213044,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,11.236087062183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57254001417827,0,0.0967563312890851,0,0,0.193978032976839,0,1.58186518546373,0,0,0,0.195551382734803,0,0,14.1864822803312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.403100834920358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.944182586429966,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,0.293104467356165,7.95041333473328,0,0,0,0,0,0.943225830597996,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,2.00013882331577,0.343395705182793,1.34699795506368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.09734283307391,0,0.54604819096007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589848616738702,0.183428598521679,6.70048863671962,0,0,0,0.676892955143315,0,0,4.7143205006656,0,0.739280431085226,0,0,0,0,0,0,0.992422356778588,0,0.383287282918786,0,0,0,0,2.7497734750418,0,0.171488009437418,0,0,0,0,0.235479278551542,0,0.560544326627578,1.82631744101899,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0.9164274741762,0,0,0,0,0,4.53200186031526,1.43727929598746,0,1.94284397223656,0,0,0,0,0,0,0,0.655678681511872,0,0.735444965261716,1.17838273550813,0,0,0,0,0.187967835959707,1.16024198352439,0,0.178553938605658,0,0,0,0,0,0.157771562193185,0,0,1.5870805215462,1.11598505450025,0,6.05677186973305,0,0.109265571963696,0,0,0,0,0,0.303114792872958,0,0,0,2.55880778281177,0.952257725854961,0,0.0620747142958579,0,0.0636471582781649,0.606351566874658,1.52401723527873,11.6359322368996,3.09819443867103,0.143444410785353,2.66128285236811,0,0,0,0,2.34640942403454,0,0.406896178315738,0.665756774185513,0,0 | |||
|short_description=p28@H19 | |||
}} |
Latest revision as of 06:35, 17 September 2015
Short description: | p28@H19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_28_at_H19_5end |
Coexpression cluster: | C227_chorionic_amniotic_Mesenchymal_Placental_gastric_diaphragm_tongue |
Association with transcript: | -61bp_to_ENST00000436715_5end |
EntrezGene: | NA |
HGNC: | 4713 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.12e-19 | 19 |
placental epithelial cell | 2.73e-09 | 3 |
chorionic membrane mesenchymal stem cell | 3.77e-09 | 3 |
pericyte cell | 7.99e-07 | 4 |
amniotic epithelial cell | 8.10e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 4.06e-27 | 14 |
membranous layer | 4.06e-27 | 14 |
larynx | 8.45e-24 | 9 |
upper respiratory tract | 1.27e-21 | 19 |
extraembryonic structure | 5.87e-20 | 24 |
chorion | 5.59e-19 | 7 |
placenta | 1.54e-11 | 4 |
allantois | 1.54e-11 | 4 |
amnion | 1.72e-10 | 7 |
egg chorion | 3.77e-09 | 3 |
somatic layer of lateral plate mesoderm | 4.12e-09 | 8 |
foregut | 5.54e-09 | 87 |
tongue | 9.33e-09 | 3 |
gustatory system | 9.33e-09 | 3 |
future tongue | 9.33e-09 | 3 |
segment of respiratory tract | 4.92e-08 | 47 |
organ component layer | 1.04e-07 | 66 |