FFCP PHASE1:Hg19::chr11:2011185..2011202,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100133545 | |EntrezGene=100133545 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=42812 | |HGNC=42812 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-35bp_to_ENST00000419080,NR_024471,uc010qxh.1_5end | |association_with_transcript=-35bp_to_ENST00000419080,NR_024471,uc010qxh.1_5end | ||
|cluster_id=chr11:2011185..2011202,- | |||
|coexpression_cluster_id=C323 | |coexpression_cluster_id=C323 | ||
|description=CAGE_peak_1_at_MRPL23-AS1_5end | |description=CAGE_peak_1_at_MRPL23-AS1_5end | ||
|id=chr11:2011185..2011202,- | |id=chr11:2011185..2011202,- | ||
|ontology_enrichment_celltype=CL:0000349!1.31e-10!3;CL:0002577!1.31e-10!3;CL:0002536!2.22e-07!2 | |ontology_enrichment_celltype=CL:0000349!1.31e-10!3;CL:0002577!1.31e-10!3;CL:0002536!2.22e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000349;1.13e-31;19!CL:0002577;4.23e-17;3!CL:0002536;1.45e-11;2!CL:0002537;3.44e-10;5!CL:0002541;8.62e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.10e-31,19;CL:0002577,4.24e-17,3;CL:0002536,1.45e-11,2;CL:0002537,3.24e-10,5;CL:0002541,8.63e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;8.91e-08;11 | |||
|ontology_enrichment_disease=DOID:305!2.77e-09!106;DOID:3119!3.99e-09!14;DOID:0050687!1.60e-07!143 | |ontology_enrichment_disease=DOID:305!2.77e-09!106;DOID:3119!3.99e-09!14;DOID:0050687!1.60e-07!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!3.16e-25!14;UBERON:0000158!3.16e-25!14;UBERON:0001737!1.39e-24!9;UBERON:0001557!4.05e-19!19;UBERON:0000077!1.40e-16!130;UBERON:0000478!2.55e-16!24;UBERON:0003124!9.71e-16!7;UBERON:0004921!4.38e-14!129;UBERON:0004185!4.38e-14!129;UBERON:0004119!1.45e-13!169;UBERON:0000925!1.45e-13!169;UBERON:0006595!1.45e-13!169;UBERON:0001987!5.48e-13!4;UBERON:0004340!5.48e-13!4;UBERON:0000305!2.40e-11!7;UBERON:0001007!2.79e-11!155;UBERON:0001555!2.79e-11!155;UBERON:0007026!2.79e-11!155;UBERON:0001041!1.99e-10!98;UBERON:0004871!7.23e-10!8;UBERON:0004923!1.25e-09!57;UBERON:0000072!8.06e-09!46;UBERON:0000065!2.02e-08!53;UBERON:0008947!3.97e-08!38;UBERON:0003258!3.97e-08!38;UBERON:0000064!5.38e-08!219;UBERON:0001052!2.96e-07!4;UBERON:0003104!4.96e-07!238;UBERON:0009142!4.96e-07!238 | |ontology_enrichment_uberon=UBERON:0005631!3.16e-25!14;UBERON:0000158!3.16e-25!14;UBERON:0001737!1.39e-24!9;UBERON:0001557!4.05e-19!19;UBERON:0000077!1.40e-16!130;UBERON:0000478!2.55e-16!24;UBERON:0003124!9.71e-16!7;UBERON:0004921!4.38e-14!129;UBERON:0004185!4.38e-14!129;UBERON:0004119!1.45e-13!169;UBERON:0000925!1.45e-13!169;UBERON:0006595!1.45e-13!169;UBERON:0001987!5.48e-13!4;UBERON:0004340!5.48e-13!4;UBERON:0000305!2.40e-11!7;UBERON:0001007!2.79e-11!155;UBERON:0001555!2.79e-11!155;UBERON:0007026!2.79e-11!155;UBERON:0001041!1.99e-10!98;UBERON:0004871!7.23e-10!8;UBERON:0004923!1.25e-09!57;UBERON:0000072!8.06e-09!46;UBERON:0000065!2.02e-08!53;UBERON:0008947!3.97e-08!38;UBERON:0003258!3.97e-08!38;UBERON:0000064!5.38e-08!219;UBERON:0001052!2.96e-07!4;UBERON:0003104!4.96e-07!238;UBERON:0009142!4.96e-07!238 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;6.57e-25;10!UBERON:0000158;6.57e-25;10!UBERON:0000478;1.32e-24;24!UBERON:0001737;7.03e-19;9!UBERON:0001557;7.03e-19;9!UBERON:0000305;7.70e-19;7!UBERON:0001987;6.03e-13;4!UBERON:0003124;8.62e-08;3!UBERON:0000920;8.62e-08;3!UBERON:0001723;1.69e-07;3!UBERON:0001033;1.69e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.71e-36,14;UBERON:0000158,3.71e-36,14;UBERON:0000478,1.29e-24,24;UBERON:0001737,5.09e-19,9;UBERON:0003124,6.19e-19,7;UBERON:0000305,7.17e-19,7;UBERON:0004871,1.76e-16,8;UBERON:0001557,2.94e-15,19;UBERON:0001987,6.03e-13,4;UBERON:0004340,6.03e-13,4;UBERON:0004921,7.65e-11,118;UBERON:0004119,3.24e-10,160;UBERON:0000925,3.24e-10,160;UBERON:0006595,3.24e-10,160;UBERON:0004923,5.11e-09,66;UBERON:0001007,4.30e-08,145;UBERON:0001555,4.30e-08,145;UBERON:0007026,4.30e-08,145;UBERON:0000920,8.63e-08,3;UBERON:0001723,1.74e-07,3;UBERON:0001033,1.74e-07,3;UBERON:0010056,1.74e-07,3;UBERON:0001041,5.53e-07,87;UBERON:0000072,6.75e-07,47 | |||
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| ||
|short_description=p1@MRPL23-AS1 | |short_description=p1@MRPL23-AS1 | ||
}} | }} |
Latest revision as of 05:57, 17 September 2015
Short description: | p1@MRPL23-AS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MRPL23-AS1_5end |
Coexpression cluster: | C323_Placental_Amniotic_neuroblastoma_amniotic_chorionic_hairy_locus |
Association with transcript: | -35bp_to_ENST00000419080, NR_024471, uc010qxh.1_5end |
EntrezGene: | MRPL23-AS1 |
HGNC: | 42812 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.10e-31 | 19 |
placental epithelial cell | 4.24e-17 | 3 |
amniotic epithelial cell | 1.45e-11 | 2 |
amnion mesenchymal stem cell | 3.24e-10 | 5 |
chorionic membrane mesenchymal stem cell | 8.63e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 3.71e-36 | 14 |
membranous layer | 3.71e-36 | 14 |
extraembryonic structure | 1.29e-24 | 24 |
larynx | 5.09e-19 | 9 |
chorion | 6.19e-19 | 7 |
amnion | 7.17e-19 | 7 |
somatic layer of lateral plate mesoderm | 1.76e-16 | 8 |
upper respiratory tract | 2.94e-15 | 19 |
placenta | 6.03e-13 | 4 |
allantois | 6.03e-13 | 4 |
subdivision of digestive tract | 7.65e-11 | 118 |
endoderm-derived structure | 3.24e-10 | 160 |
endoderm | 3.24e-10 | 160 |
presumptive endoderm | 3.24e-10 | 160 |
organ component layer | 5.11e-09 | 66 |
digestive system | 4.30e-08 | 145 |
digestive tract | 4.30e-08 | 145 |
primitive gut | 4.30e-08 | 145 |
egg chorion | 8.63e-08 | 3 |
tongue | 1.74e-07 | 3 |
gustatory system | 1.74e-07 | 3 |
future tongue | 1.74e-07 | 3 |
foregut | 5.53e-07 | 87 |
segment of respiratory tract | 6.75e-07 | 47 |