FFCP PHASE1:Hg19::chr13:36944250..36944280,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23111 | |EntrezGene=23111 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18514 | |HGNC=18514 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=9bp_to_ENST00000494062_5end | |association_with_transcript=9bp_to_ENST00000494062_5end | ||
|cluster_id=chr13:36944250..36944280,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_8_at_SPG20_5end | |description=CAGE_peak_8_at_SPG20_5end | ||
|id=chr13:36944250..36944280,- | |id=chr13:36944250..36944280,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.87e-21;82!UBERON:0006241;7.95e-14;3!UBERON:0003057;7.95e-14;3!UBERON:0006215;1.43e-12;3!UBERON:0010122;1.49e-09;2!UBERON:0002532;1.90e-07;206!UBERON:0010316;1.90e-07;206 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.03e-92!57;UBERON:0005068!1.03e-92!57;UBERON:0006241!1.03e-92!57;UBERON:0007135!1.03e-92!57;UBERON:0001017!1.74e-78!82;UBERON:0002616!2.10e-75!59;UBERON:0005743!1.91e-74!86;UBERON:0000073!4.46e-70!94;UBERON:0001016!4.46e-70!94;UBERON:0000955!7.77e-70!69;UBERON:0006238!7.77e-70!69;UBERON:0003075!5.75e-65!86;UBERON:0007284!5.75e-65!86;UBERON:0002780!6.71e-62!41;UBERON:0001890!6.71e-62!41;UBERON:0006240!6.71e-62!41;UBERON:0002346!1.14e-61!90;UBERON:0003080!2.75e-60!42;UBERON:0007023!2.86e-60!115;UBERON:0001893!4.78e-59!34;UBERON:0002020!5.57e-59!34;UBERON:0003528!5.57e-59!34;UBERON:0002791!7.13e-56!33;UBERON:0001869!2.05e-52!32;UBERON:0003056!1.53e-39!61;UBERON:0000033!1.05e-37!123;UBERON:0002619!3.29e-36!22;UBERON:0000153!1.57e-35!129;UBERON:0007811!1.57e-35!129;UBERON:0004121!6.41e-35!169;UBERON:0000924!6.94e-34!173;UBERON:0006601!6.94e-34!173;UBERON:0003076!7.29e-33!15;UBERON:0003057!7.29e-33!15;UBERON:0002308!1.98e-32!9;UBERON:0000125!1.98e-32!9;UBERON:0000956!1.44e-31!25;UBERON:0000203!1.44e-31!25;UBERON:0001950!2.58e-30!20;UBERON:0004732!1.27e-26!13;UBERON:0009663!1.89e-25!7;UBERON:0002420!1.91e-25!9;UBERON:0007245!1.91e-25!9;UBERON:0010009!1.91e-25!9;UBERON:0010011!1.91e-25!9;UBERON:0000454!1.91e-25!9;UBERON:0004733!2.77e-23!12;UBERON:0002028!2.77e-23!12;UBERON:0007277!2.77e-23!12;UBERON:0002298!7.63e-23!8;UBERON:0000025!9.69e-21!194;UBERON:0004111!7.45e-16!241;UBERON:0000200!4.98e-15!6;UBERON:0000369!9.64e-15!4;UBERON:0002435!9.64e-15!4;UBERON:0000204!9.64e-15!4;UBERON:0010082!9.64e-15!4;UBERON:0000483!1.75e-14!309;UBERON:0000119!3.03e-14!312;UBERON:0002680!5.54e-14!9;UBERON:0001895!5.54e-14!9;UBERON:0010092!5.54e-14!9;UBERON:0000477!1.19e-13!286;UBERON:0000064!1.19e-12!219;UBERON:0000988!2.35e-12!3;UBERON:0006331!2.63e-12!3;UBERON:0000475!2.87e-12!365;UBERON:0001896!4.59e-12!3;UBERON:0005290!4.59e-12!3;UBERON:0010096!4.59e-12!3;UBERON:0000349!5.72e-12!5;UBERON:0002240!7.67e-12!3;UBERON:0002771!1.70e-11!3;UBERON:0001872!1.81e-11!5;UBERON:0005383!1.90e-11!3;UBERON:0005382!1.90e-11!3;UBERON:0001871!3.56e-11!7;UBERON:0005162!5.22e-09!2;UBERON:0000122!5.22e-09!2;UBERON:0001897!6.81e-09!2;UBERON:0001875!7.35e-09!2;UBERON:0006514!7.35e-09!2;UBERON:0002148!1.07e-08!2;UBERON:0009662!1.07e-08!2;UBERON:0001954!2.80e-08!2;UBERON:0003022!2.80e-08!2;UBERON:0002421!2.80e-08!2;UBERON:0002600!2.80e-08!2;UBERON:0001873!3.01e-08!2;UBERON:0010122!3.01e-08!2;UBERON:0000062!5.01e-08!511;UBERON:0002360!9.75e-08!2;UBERON:0000094!9.75e-08!2;UBERON:0007645!9.75e-08!2;UBERON:0005174!2.93e-07!5;UBERON:0001137!2.93e-07!5;UBERON:0002021!4.38e-07!5 | 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| ||
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|short_description=p8@SPG20 | |short_description=p8@SPG20 | ||
}} | }} |
Latest revision as of 05:52, 17 September 2015
Short description: | p8@SPG20 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SPG20_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 9bp_to_ENST00000494062_5end |
EntrezGene: | SPG20 |
HGNC: | 18514 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data