FFCP PHASE1:Hg19::chr1:26680570..26680632,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55057 | |EntrezGene=55057 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17295 | |HGNC=17295 | ||
|TSSclassifier=strong | |||
|UniProt=E7EX92,E7ET48,F5H7C3,Q8N1P7,Q9NWG5 | |UniProt=E7EX92,E7ET48,F5H7C3,Q8N1P7,Q9NWG5 | ||
|association_with_transcript=0bp_to_ENST00000374207,ENST00000475866,ENST00000538018,NM_001039775,uc009vsi.1_5end | |association_with_transcript=0bp_to_ENST00000374207,ENST00000475866,ENST00000538018,NM_001039775,uc009vsi.1_5end | ||
|cluster_id=chr1:26680570..26680632,- | |||
|coexpression_cluster_id=C665 | |coexpression_cluster_id=C665 | ||
|description=CAGE_peak_1_at_AIM1L_5end | |description=CAGE_peak_1_at_AIM1L_5end | ||
|id=chr1:26680570..26680632,- | |id=chr1:26680570..26680632,- | ||
|ontology_enrichment_celltype=CL:0000066!1.70e-30!254;CL:0002076!8.42e-27!43;CL:0000223!9.48e-24!59;CL:0002368!2.40e-14!13;CL:0002251!6.94e-12!21;CL:0002202!1.61e-10!9;CL:0002632!1.61e-10!9;CL:0002159!1.04e-08!13 | |ontology_enrichment_celltype=CL:0000066!1.70e-30!254;CL:0002076!8.42e-27!43;CL:0000223!9.48e-24!59;CL:0002368!2.40e-14!13;CL:0002251!6.94e-12!21;CL:0002202!1.61e-10!9;CL:0002632!1.61e-10!9;CL:0002159!1.04e-08!13 | ||
|ontology_enrichment_celltype_v019=CL:0002076;5.65e-25;42!CL:0002368;7.75e-18;13!CL:0002251;2.38e-14;20!CL:0002202;5.98e-13;9!CL:0002632;5.98e-13;9!CL:0002159;4.80e-10;14!CL:0000349;1.92e-08;19!CL:0000622;7.71e-08;5!CL:0000244;1.11e-07;4!CL:0000731;1.11e-07;4!CL:0000082;2.79e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,7.04e-32,42;CL:0000066,1.12e-27,253;CL:0000223,8.79e-25,58;CL:0002368,8.69e-18,13;CL:0002251,2.09e-14,20;CL:0002202,6.26e-13,9;CL:0002632,6.26e-13,9;CL:0002159,5.09e-10,14;CL:0000349,1.84e-08,19;CL:0000622,7.42e-08,5;CL:0000244,1.05e-07,4;CL:0000731,1.05e-07,4;CL:0000082,2.87e-07,19 | |||
|ontology_enrichment_development_v019=CL:0000223;9.65e-14;58 | |||
|ontology_enrichment_disease=DOID:305!2.14e-16!106;DOID:1749!6.98e-12!14;DOID:0050687!2.63e-10!143;DOID:299!3.29e-08!25 | |ontology_enrichment_disease=DOID:305!2.14e-16!106;DOID:1749!6.98e-12!14;DOID:0050687!2.63e-10!143;DOID:299!3.29e-08!25 | ||
|ontology_enrichment_disease_v019=DOID:1749;8.21e-13;14!DOID:299;2.95e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,9.00e-13,14;DOID:305,5.02e-11,106;DOID:0050687,1.95e-07,143;DOID:299,3.00e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.24e-28!169;UBERON:0000925!1.24e-28!169;UBERON:0006595!1.24e-28!169;UBERON:0001007!9.00e-20!155;UBERON:0001555!9.00e-20!155;UBERON:0007026!9.00e-20!155;UBERON:0000077!2.30e-19!130;UBERON:0004921!5.53e-18!129;UBERON:0004185!5.53e-18!129;UBERON:0001004!9.05e-18!72;UBERON:0000161!1.94e-12!35;UBERON:0000464!3.63e-12!104;UBERON:0005631!4.04e-12!14;UBERON:0000158!4.04e-12!14;UBERON:0000065!1.04e-11!53;UBERON:0000466!1.13e-11!126;UBERON:0001041!1.70e-11!98;UBERON:0005911!2.11e-11!82;UBERON:0000062!5.17e-10!511;UBERON:0000166!6.80e-10!21;UBERON:0000072!3.14e-09!46;UBERON:0003124!3.68e-09!7;UBERON:0007196!5.98e-09!14;UBERON:0001558!5.98e-09!14;UBERON:0005181!6.01e-09!35;UBERON:0000344!7.56e-09!12;UBERON:0005178!2.02e-08!34;UBERON:0002224!2.02e-08!34;UBERON:0000064!4.06e-08!219;UBERON:0003104!1.55e-07!238;UBERON:0009142!1.55e-07!238;UBERON:0005153!1.80e-07!37;UBERON:0005177!1.83e-07!107;UBERON:0000165!1.86e-07!28;UBERON:0000930!1.86e-07!28;UBERON:0005910!2.14e-07!6;UBERON:0001008!3.07e-07!45;UBERON:0004807!4.27e-07!28;UBERON:0008947!4.41e-07!38;UBERON:0003258!4.41e-07!38;UBERON:0000365!5.67e-07!5 | |ontology_enrichment_uberon=UBERON:0004119!1.24e-28!169;UBERON:0000925!1.24e-28!169;UBERON:0006595!1.24e-28!169;UBERON:0001007!9.00e-20!155;UBERON:0001555!9.00e-20!155;UBERON:0007026!9.00e-20!155;UBERON:0000077!2.30e-19!130;UBERON:0004921!5.53e-18!129;UBERON:0004185!5.53e-18!129;UBERON:0001004!9.05e-18!72;UBERON:0000161!1.94e-12!35;UBERON:0000464!3.63e-12!104;UBERON:0005631!4.04e-12!14;UBERON:0000158!4.04e-12!14;UBERON:0000065!1.04e-11!53;UBERON:0000466!1.13e-11!126;UBERON:0001041!1.70e-11!98;UBERON:0005911!2.11e-11!82;UBERON:0000062!5.17e-10!511;UBERON:0000166!6.80e-10!21;UBERON:0000072!3.14e-09!46;UBERON:0003124!3.68e-09!7;UBERON:0007196!5.98e-09!14;UBERON:0001558!5.98e-09!14;UBERON:0005181!6.01e-09!35;UBERON:0000344!7.56e-09!12;UBERON:0005178!2.02e-08!34;UBERON:0002224!2.02e-08!34;UBERON:0000064!4.06e-08!219;UBERON:0003104!1.55e-07!238;UBERON:0009142!1.55e-07!238;UBERON:0005153!1.80e-07!37;UBERON:0005177!1.83e-07!107;UBERON:0000165!1.86e-07!28;UBERON:0000930!1.86e-07!28;UBERON:0005910!2.14e-07!6;UBERON:0001008!3.07e-07!45;UBERON:0004807!4.27e-07!28;UBERON:0008947!4.41e-07!38;UBERON:0003258!4.41e-07!38;UBERON:0000365!5.67e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0005911;1.44e-10;36!UBERON:0004807;2.19e-10;22!UBERON:0007196;2.53e-10;15!UBERON:0001558;2.53e-10;15!UBERON:0005178;4.45e-10;34!UBERON:0002224;4.45e-10;34!UBERON:0005631;6.29e-10;10!UBERON:0000158;6.29e-10;10!UBERON:0005181;1.27e-09;35!UBERON:0000478;9.01e-09;24!UBERON:0004921;1.66e-08;33!UBERON:0002294;6.05e-08;7!UBERON:0001173;6.05e-08;7!UBERON:0000165;1.11e-07;28!UBERON:0000344;1.15e-07;20!UBERON:0000161;2.03e-07;19!UBERON:0000166;2.03e-07;19!UBERON:0001041;2.08e-07;14!UBERON:0004802;2.79e-07;19!UBERON:0000115;2.79e-07;19!UBERON:0001555;3.94e-07;54!UBERON:0001987;4.33e-07;4!UBERON:0002048;4.63e-07;22!UBERON:0000117;4.63e-07;22!UBERON:0000171;4.63e-07;22!UBERON:0000170;4.63e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.58e-26,160;UBERON:0000925,3.58e-26,160;UBERON:0006595,3.58e-26,160;UBERON:0001007,2.65e-17,145;UBERON:0001555,2.65e-17,145;UBERON:0007026,2.65e-17,145;UBERON:0004921,2.99e-15,118;UBERON:0005631,3.13e-15,14;UBERON:0000158,3.13e-15,14;UBERON:0001004,4.23e-14,74;UBERON:0000161,6.12e-12,36;UBERON:0005911,1.77e-11,82;UBERON:0005178,2.32e-11,34;UBERON:0002224,2.32e-11,34;UBERON:0003124,3.32e-11,7;UBERON:0005181,6.87e-11,35;UBERON:0001041,7.91e-11,87;UBERON:0000065,8.22e-11,54;UBERON:0007196,2.39e-10,15;UBERON:0001558,2.39e-10,15;UBERON:0001008,3.05e-10,48;UBERON:0006554,1.46e-09,47;UBERON:0000166,3.58e-09,22;UBERON:0000478,8.82e-09,24;UBERON:0005153,2.79e-08,37;UBERON:0003102,5.23e-08,99;UBERON:0000072,6.98e-08,47;UBERON:0000344,1.12e-07,20;UBERON:0005157,1.23e-07,47;UBERON:0004807,2.05e-07,28;UBERON:0005177,2.41e-07,101;UBERON:0000165,2.59e-07,29;UBERON:0000930,2.59e-07,29;UBERON:0004802,2.87e-07,19;UBERON:0000115,2.87e-07,19;UBERON:0001987,4.17e-07,4;UBERON:0004340,4.17e-07,4;UBERON:0004923,4.56e-07,66;UBERON:0008947,4.60e-07,38;UBERON:0003258,4.60e-07,38;UBERON:0002048,4.91e-07,22;UBERON:0000117,4.91e-07,22;UBERON:0000171,4.91e-07,22;UBERON:0000170,4.91e-07,22;UBERON:0005597,4.91e-07,22;UBERON:0000118,4.91e-07,22 | |||
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| ||
|short_description=p1@AIM1L | |short_description=p1@AIM1L | ||
}} | }} |
Latest revision as of 05:37, 17 September 2015
Short description: | p1@AIM1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AIM1L_5end |
Coexpression cluster: | C665_amniotic_esophagus_tongue_Corneal_tonsil_salivary_Urothelial |
Association with transcript: | 0bp_to_ENST00000374207, ENST00000475866, ENST00000538018, NM_001039775, uc009vsi.1_5end |
EntrezGene: | AIM1L |
HGNC: | 17295 |
UniProt: | E7EX92E7ET48F5H7C3Q8N1P7Q9NWG5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 7.04e-32 | 42 |
epithelial cell | 1.12e-27 | 253 |
endodermal cell | 8.79e-25 | 58 |
respiratory epithelial cell | 8.69e-18 | 13 |
epithelial cell of alimentary canal | 2.09e-14 | 20 |
epithelial cell of tracheobronchial tree | 6.26e-13 | 9 |
epithelial cell of lower respiratory tract | 6.26e-13 | 9 |
general ecto-epithelial cell | 5.09e-10 | 14 |
extraembryonic cell | 1.84e-08 | 19 |
acinar cell | 7.42e-08 | 5 |
transitional epithelial cell | 1.05e-07 | 4 |
urothelial cell | 1.05e-07 | 4 |
epithelial cell of lung | 2.87e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 9.00e-13 | 14 |
carcinoma | 5.02e-11 | 106 |
cell type cancer | 1.95e-07 | 143 |
adenocarcinoma | 3.00e-07 | 25 |