FFCP PHASE1:Hg19::chr5:176057576..176057590,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6620 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11140 | |||
|TSSclassifier=strong | |||
|UniProt=Q16143 | |||
|association_with_transcript=-19bp_to_NM_001001502,NM_003085,uc003mep.2,uc003meq.2_5end | |||
|cluster_id=chr5:176057576..176057590,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_SNCB_5end | |||
|id=chr5:176057576..176057590,- | |||
|ontology_enrichment_celltype=CL:0002322!9.26e-07!5 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.94e-20;82!UBERON:0006215;1.80e-10;3!UBERON:0010122;8.13e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.02e-58!82;UBERON:0001049!7.15e-58!57;UBERON:0005068!7.15e-58!57;UBERON:0006241!7.15e-58!57;UBERON:0007135!7.15e-58!57;UBERON:0005743!1.35e-56!86;UBERON:0000073!3.00e-56!94;UBERON:0001016!3.00e-56!94;UBERON:0000955!1.81e-48!69;UBERON:0006238!1.81e-48!69;UBERON:0002616!6.63e-48!59;UBERON:0003075!1.78e-46!86;UBERON:0007284!1.78e-46!86;UBERON:0002780!1.27e-43!41;UBERON:0001890!1.27e-43!41;UBERON:0006240!1.27e-43!41;UBERON:0002346!1.49e-43!90;UBERON:0003080!2.70e-42!42;UBERON:0001893!5.48e-37!34;UBERON:0002020!5.63e-37!34;UBERON:0003528!5.63e-37!34;UBERON:0002791!2.01e-35!33;UBERON:0001869!1.79e-34!32;UBERON:0007023!3.07e-34!115;UBERON:0004121!2.80e-32!169;UBERON:0000924!5.28e-31!173;UBERON:0006601!5.28e-31!173;UBERON:0003056!2.26e-30!61;UBERON:0002619!3.21e-29!22;UBERON:0000033!1.59e-26!123;UBERON:0001950!2.24e-26!20;UBERON:0000956!5.84e-25!25;UBERON:0000203!5.84e-25!25;UBERON:0000153!1.85e-24!129;UBERON:0007811!1.85e-24!129;UBERON:0000025!3.37e-16!194;UBERON:0003076!4.27e-16!15;UBERON:0003057!4.27e-16!15;UBERON:0002308!1.26e-13!9;UBERON:0002420!1.26e-13!9;UBERON:0000125!1.26e-13!9;UBERON:0007245!1.26e-13!9;UBERON:0010009!1.26e-13!9;UBERON:0010011!1.26e-13!9;UBERON:0000454!1.26e-13!9;UBERON:0000119!6.90e-13!312;UBERON:0004111!8.88e-13!241;UBERON:0000483!1.05e-12!309;UBERON:0004733!2.51e-12!12;UBERON:0002028!2.51e-12!12;UBERON:0007277!2.51e-12!12;UBERON:0004732!3.64e-11!13;UBERON:0009663!8.18e-11!7;UBERON:0000200!1.05e-10!6;UBERON:0001871!4.44e-10!7;UBERON:0000477!9.05e-10!286;UBERON:0002298!1.16e-09!8;UBERON:0000064!1.27e-09!219;UBERON:0002021!6.08e-09!5;UBERON:0000349!9.02e-09!5;UBERON:0002680!1.92e-08!9;UBERON:0001895!1.92e-08!9;UBERON:0010092!1.92e-08!9;UBERON:0000475!5.82e-08!365;UBERON:0001894!6.18e-08!7;UBERON:0006222!6.18e-08!7;UBERON:0000369!5.04e-07!4;UBERON:0002435!5.04e-07!4;UBERON:0000204!5.04e-07!4;UBERON:0010082!5.04e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;5.55e-64;34!UBERON:0003528;2.72e-63;34!UBERON:0002020;2.72e-63;34!UBERON:0001869;3.08e-63;32!UBERON:0002791;1.17e-62;32!UBERON:0002619;1.58e-58;22!UBERON:0002780;1.97e-56;41!UBERON:0001890;1.97e-56;41!UBERON:0000073;2.66e-54;53!UBERON:0002616;2.66e-54;53!UBERON:0001950;1.03e-52;20!UBERON:0000956;4.33e-51;25!UBERON:0000203;4.33e-51;25!UBERON:0000955;4.23e-39;68!UBERON:0001017;2.56e-36;75!UBERON:0001016;7.75e-28;83!UBERON:0002420;7.05e-26;9!UBERON:0007245;7.05e-26;9!UBERON:0010009;7.05e-26;9!UBERON:0010011;7.05e-26;9!UBERON:0000454;7.05e-26;9!UBERON:0000125;7.27e-26;9!UBERON:0002308;7.27e-26;9!UBERON:0009663;3.46e-20;7!UBERON:0004733;3.76e-20;12!UBERON:0002028;3.76e-20;12!UBERON:0000200;4.98e-20;6!UBERON:0002298;1.02e-18;6!UBERON:0004732;1.83e-18;13!UBERON:0002021;2.32e-16;5!UBERON:0001871;2.81e-16;6!UBERON:0000349;4.10e-16;5!UBERON:0007023;3.19e-15;114!UBERON:0002680;1.28e-12;9!UBERON:0001895;1.28e-12;9!UBERON:0000369;1.58e-12;4!UBERON:0002435;1.58e-12;4!UBERON:0000204;1.58e-12;4!UBERON:0011216;5.47e-12;132!UBERON:0001872;2.28e-11;5!UBERON:0001870;6.70e-11;3!UBERON:0000988;1.51e-10;3!UBERON:0001896;6.78e-10;3!UBERON:0005290;6.78e-10;3!UBERON:0005383;1.51e-09;3!UBERON:0005382;1.51e-09;3!UBERON:0010314;6.43e-08;132!UBERON:0002784;7.27e-08;4!UBERON:0002702;9.27e-08;2!UBERON:0001905;1.11e-07;2!UBERON:0002757;1.11e-07;2!UBERON:0010134;1.11e-07;2!UBERON:0005408;1.11e-07;2!UBERON:0001899;1.11e-07;2!UBERON:0001894;1.52e-07;7!UBERON:0002771;1.64e-07;2!UBERON:0001954;2.05e-07;2!UBERON:0003022;2.05e-07;2!UBERON:0002421;2.05e-07;2!UBERON:0002600;2.05e-07;2!UBERON:0001876;2.16e-07;2!UBERON:0002148;2.23e-07;2!UBERON:0006331;2.23e-07;2!UBERON:0009662;2.23e-07;2!UBERON:0001875;6.87e-07;2!UBERON:0006514;6.87e-07;2!UBERON:0001873;8.13e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.36e-104,56;UBERON:0005068,2.36e-104,56;UBERON:0006241,2.36e-104,56;UBERON:0007135,2.36e-104,56;UBERON:0000073,1.11e-100,53;UBERON:0002616,1.11e-100,53;UBERON:0001017,7.08e-90,81;UBERON:0000955,1.71e-87,68;UBERON:0006238,1.71e-87,68;UBERON:0002780,1.15e-80,41;UBERON:0001890,1.15e-80,41;UBERON:0003080,1.15e-80,41;UBERON:0006240,1.15e-80,41;UBERON:0001016,6.87e-80,89;UBERON:0001893,8.56e-76,34;UBERON:0003528,9.04e-76,34;UBERON:0002020,9.04e-76,34;UBERON:0003075,1.58e-71,82;UBERON:0007284,1.58e-71,82;UBERON:0001869,1.18e-70,32;UBERON:0002791,5.87e-70,32;UBERON:0002346,1.04e-67,86;UBERON:0002619,1.29e-58,22;UBERON:0010371,1.20e-56,104;UBERON:0003056,4.60e-55,61;UBERON:0001950,8.06e-53,20;UBERON:0000956,3.62e-51,25;UBERON:0000203,3.62e-51,25;UBERON:0007023,1.65e-49,114;UBERON:0010314,1.49e-44,132;UBERON:0004121,5.16e-40,171;UBERON:0000924,5.16e-40,171;UBERON:0006601,5.16e-40,171;UBERON:0011216,1.45e-30,223;UBERON:0000025,1.26e-29,192;UBERON:0002420,6.54e-26,9;UBERON:0000125,6.54e-26,9;UBERON:0007245,6.54e-26,9;UBERON:0002308,6.54e-26,9;UBERON:0010009,6.54e-26,9;UBERON:0010011,6.54e-26,9;UBERON:0000454,6.54e-26,9;UBERON:0003076,1.60e-23,15;UBERON:0003057,1.60e-23,15;UBERON:0004111,2.45e-21,240;UBERON:0009663,3.21e-20,7;UBERON:0004733,3.80e-20,12;UBERON:0002028,3.80e-20,12;UBERON:0007277,3.80e-20,12;UBERON:0000200,5.32e-20,6;UBERON:0002298,9.41e-19,6;UBERON:0004732,1.85e-18,13;UBERON:0002021,1.91e-16,5;UBERON:0001871,2.89e-16,6;UBERON:0000349,4.23e-16,5;UBERON:0000483,5.36e-16,306;UBERON:0000119,1.00e-15,309;UBERON:0002680,1.34e-12,9;UBERON:0001895,1.34e-12,9;UBERON:0010092,1.34e-12,9;UBERON:0000369,1.38e-12,4;UBERON:0002435,1.38e-12,4;UBERON:0000204,1.38e-12,4;UBERON:0010082,1.38e-12,4;UBERON:0001872,2.14e-11,5;UBERON:0001870,6.38e-11,3;UBERON:0000988,1.49e-10,3;UBERON:0001896,6.37e-10,3;UBERON:0005290,6.37e-10,3;UBERON:0010096,6.37e-10,3;UBERON:0005383,1.33e-09,3;UBERON:0005382,1.33e-09,3;UBERON:0000923,6.40e-08,560;UBERON:0010316,6.40e-08,560;UBERON:0005291,6.40e-08,560;UBERON:0006598,6.40e-08,560;UBERON:0010317,6.40e-08,560;UBERON:0002532,6.40e-08,560;UBERON:0002784,7.63e-08,4;UBERON:0002702,8.97e-08,2;UBERON:0002050,9.07e-08,564;UBERON:0001905,1.13e-07,2;UBERON:0002757,1.13e-07,2;UBERON:0010134,1.13e-07,2;UBERON:0005408,1.13e-07,2;UBERON:0001899,1.13e-07,2;UBERON:0001894,1.57e-07,7;UBERON:0006222,1.57e-07,7;UBERON:0002771,1.78e-07,2;UBERON:0000922,2.07e-07,592;UBERON:0001876,2.16e-07,2;UBERON:0001954,2.16e-07,2;UBERON:0002148,2.16e-07,2;UBERON:0006331,2.16e-07,2;UBERON:0009662,2.16e-07,2;UBERON:0003022,2.16e-07,2;UBERON:0002421,2.16e-07,2;UBERON:0002600,2.16e-07,2;UBERON:0005423,3.78e-07,581;UBERON:0001875,6.27e-07,2;UBERON:0006514,6.27e-07,2;UBERON:0001873,7.31e-07,2;UBERON:0010122,7.31e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40545596294053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52054421143703,1.95249646038536,0,0,0.0892997282840798,0,0,0,0.949265659568129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.272746120590835,0,0.243947412259191,0.265059536642971,0.580969714347592,0.414644220061482,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0.201057944823262,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0.253991577168676,0,1.17217447210047,0,0,0,0.285826432630578,0,0,0.1466765716419,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0.773288812777695,0.837581326671744,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0.340187410553031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0.464845549297286,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0.144269212976445,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18448939149124,0,0,0,0,0,12.9239194209619,7.45547906975718,0,0,0,0,0.276283915531148,0.251932747854276,0,0,0,0,0,0,0,0,0,33.9266461133326,23.8414012275958,7.98455192004777,0,0,0,0.1137934482855,0,0,3.10269035917318,0.583209226766509,0.868124974666461,4.42870692906919,1.80894657938112,9.15490417902499,9.84155413387899,19.5061428509341,19.5253003467036,0,0,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,2.15683625538167,0,9.83910672046424,0,0,0,0,0,4.89716418608784,0.568679216656392,0,0.103688191397247,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.7956311160055,0,0,20.4493870937488,0,0,0,0,0,0,0.171594997861965,0,0,0,0.271808412147228,0,0,0,6.60462317580768,1.77976992559591,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,14.3141344165675,6.40156008724405,0,0.137539436597234,0,0,0,20.2903519237802,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0.326587360109409,0,0,0,0,0,0,13.3161445052397,6.6116300871345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.9492272394057,14.2770729935297,15.6488663383125,4.58727356552057,3.99344585532668,10.3080028882697,0,0,0,0,0,0,1.01444720027578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,9.67809053062115,0,0,0,0,0,0,0,0,0,0,0.736423801007363,0,0,0.255788742607303,0.107824811396682,0,0,0,0,0,0,0,0.0788617450012534,2.40171224485641,0,0,14.5158048717999,9.91876034279095,9.89729926154338,24.8190800731314,2.52071696221718,32.0198078909329,15.0172350437622,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,27.3527217704498,19.5269524653462,14.8814493480853,25.6199873183384,0,0,0,0,0,18.2138624198618,12.1062139998777,0,0.455324382702595,0,0,0,23.1776789450996,30.7816580274134,0.118193840883968,0,0,5.49904564706007,0,0,0,0,10.2211458172619,0.632054446930906,0,0,0,0,0,0,0,0.473328002922261,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0.596852325484105,0.475680363110274,0,1.42922671769058,0.452888530700021,0.154348316215889,0,0,0,0,5.10402014498858,0.594092800654172,9.2984260068348,0,0,0.0644578879735772,0,0,0,0,0,0,1.00337708206016,0,28.4204428998023,2.61810414204226,0,0,0,0,0,0,0,0.101988829741982,0.26721740526556,0,0.250707539292375,0.151557396436479,0.267964130156178,4.1458471972939,0.517164979309476,0,0,0,0,0,0,0.202117188958219,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@SNCB | |||
}} |
Latest revision as of 05:02, 17 September 2015
Short description: | p3@SNCB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SNCB_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -19bp_to_NM_001001502, NM_003085, uc003mep.2, uc003meq.2_5end |
EntrezGene: | SNCB |
HGNC: | 11140 |
UniProt: | Q16143 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data