FFCP PHASE1:Hg19::chr5:173473709..173473755,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51617 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=47bp_to_ENST00000519717_5end | |||
|cluster_id=chr5:173473709..173473755,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_HMP19_5end | |||
|id=chr5:173473709..173473755,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.59e-17;82!UBERON:0010122;1.05e-11;2!UBERON:0006215;3.13e-07;3 | |||
|ontology_enrichment_disease=DOID:169!6.24e-07!6 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.23e-86!57;UBERON:0005068!1.23e-86!57;UBERON:0006241!1.23e-86!57;UBERON:0007135!1.23e-86!57;UBERON:0001017!7.33e-81!82;UBERON:0000073!1.04e-79!94;UBERON:0001016!1.04e-79!94;UBERON:0005743!1.50e-79!86;UBERON:0002616!4.30e-72!59;UBERON:0002020!3.57e-70!34;UBERON:0003528!3.57e-70!34;UBERON:0001893!6.11e-70!34;UBERON:0000955!2.70e-69!69;UBERON:0006238!2.70e-69!69;UBERON:0002780!2.99e-69!41;UBERON:0001890!2.99e-69!41;UBERON:0006240!2.99e-69!41;UBERON:0002791!2.07e-67!33;UBERON:0003080!2.09e-67!42;UBERON:0001869!2.32e-65!32;UBERON:0003075!1.47e-61!86;UBERON:0007284!1.47e-61!86;UBERON:0002346!7.12e-61!90;UBERON:0002619!3.12e-54!22;UBERON:0007023!1.40e-53!115;UBERON:0001950!3.78e-49!20;UBERON:0000956!3.24e-47!25;UBERON:0000203!3.24e-47!25;UBERON:0003056!2.50e-46!61;UBERON:0000924!6.23e-39!173;UBERON:0006601!6.23e-39!173;UBERON:0004121!1.43e-38!169;UBERON:0000033!1.41e-37!123;UBERON:0000153!2.87e-35!129;UBERON:0007811!2.87e-35!129;UBERON:0002420!1.02e-24!9;UBERON:0007245!1.02e-24!9;UBERON:0010009!1.02e-24!9;UBERON:0010011!1.02e-24!9;UBERON:0000454!1.02e-24!9;UBERON:0002308!2.40e-24!9;UBERON:0000125!2.40e-24!9;UBERON:0000025!7.86e-24!194;UBERON:0003076!2.14e-19!15;UBERON:0003057!2.14e-19!15;UBERON:0009663!2.40e-19!7;UBERON:0001871!7.89e-17!7;UBERON:0004111!1.15e-16!241;UBERON:0000200!3.84e-16!6;UBERON:0000349!8.56e-15!5;UBERON:0001872!4.01e-14!5;UBERON:0002021!9.51e-14!5;UBERON:0000064!1.16e-13!219;UBERON:0000477!1.30e-13!286;UBERON:0004733!2.57e-13!12;UBERON:0002028!2.57e-13!12;UBERON:0007277!2.57e-13!12;UBERON:0000369!8.15e-13!4;UBERON:0002435!8.15e-13!4;UBERON:0000204!8.15e-13!4;UBERON:0010082!8.15e-13!4;UBERON:0000483!2.40e-12!309;UBERON:0004732!3.53e-12!13;UBERON:0000119!4.21e-12!312;UBERON:0002298!9.39e-12!8;UBERON:0002680!1.75e-10!9;UBERON:0001895!1.75e-10!9;UBERON:0010092!1.75e-10!9;UBERON:0005383!4.43e-10!3;UBERON:0005382!4.43e-10!3;UBERON:0000475!3.06e-09!365;UBERON:0000988!3.30e-09!3;UBERON:0006331!8.53e-09!3;UBERON:0002771!1.21e-08!3;UBERON:0002240!2.39e-08!3;UBERON:0000922!4.72e-08!612;UBERON:0000062!2.62e-07!511;UBERON:0000923!2.97e-07!604;UBERON:0005291!2.97e-07!604;UBERON:0006598!2.97e-07!604;UBERON:0002532!2.97e-07!604;UBERON:0001873!2.97e-07!2;UBERON:0010122!2.97e-07!2;UBERON:0002050!3.24e-07!605;UBERON:0005423!3.24e-07!605;UBERON:0001876!4.60e-07!2;UBERON:0001870!8.60e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.99e-75;32!UBERON:0003528;1.37e-73;34!UBERON:0002020;1.37e-73;34!UBERON:0002619;4.56e-73;22!UBERON:0002791;4.20e-70;32!UBERON:0001893;4.93e-68;34!UBERON:0001950;3.62e-64;20!UBERON:0000956;3.90e-64;25!UBERON:0000203;3.90e-64;25!UBERON:0002780;3.30e-54;41!UBERON:0001890;3.30e-54;41!UBERON:0000073;6.31e-47;53!UBERON:0002616;6.31e-47;53!UBERON:0000955;5.40e-39;68!UBERON:0001017;6.06e-31;75!UBERON:0001016;1.15e-27;83!UBERON:0000349;3.91e-25;5!UBERON:0001872;2.76e-24;5!UBERON:0000369;1.36e-21;4!UBERON:0002435;1.36e-21;4!UBERON:0000204;1.36e-21;4!UBERON:0002420;1.53e-20;9!UBERON:0007245;1.53e-20;9!UBERON:0010009;1.53e-20;9!UBERON:0010011;1.53e-20;9!UBERON:0000454;1.53e-20;9!UBERON:0000125;3.47e-20;9!UBERON:0002308;3.47e-20;9!UBERON:0001871;3.26e-18;6!UBERON:0005383;9.82e-17;3!UBERON:0005382;9.82e-17;3!UBERON:0002021;7.72e-16;5!UBERON:0000988;4.27e-15;3!UBERON:0004733;8.47e-14;12!UBERON:0002028;8.47e-14;12!UBERON:0007023;2.71e-13;114!UBERON:0000200;3.18e-13;6!UBERON:0002680;3.95e-13;9!UBERON:0001895;3.95e-13;9!UBERON:0002298;5.13e-13;6!UBERON:0004732;1.08e-12;13!UBERON:0009663;2.21e-12;7!UBERON:0001873;1.05e-11;2!UBERON:0001876;2.79e-11;2!UBERON:0001954;9.53e-11;2!UBERON:0002148;9.53e-11;2!UBERON:0006331;9.53e-11;2!UBERON:0009662;9.53e-11;2!UBERON:0003022;9.53e-11;2!UBERON:0002421;9.53e-11;2!UBERON:0002600;9.53e-11;2!UBERON:0011216;3.82e-10;132!UBERON:0010314;1.84e-07;132!UBERON:0001870;1.93e-07;3!UBERON:0001874;9.90e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.31e-87,53;UBERON:0002616,7.31e-87,53;UBERON:0003528,3.67e-83,34;UBERON:0002020,3.67e-83,34;UBERON:0001049,6.09e-82,56;UBERON:0005068,6.09e-82,56;UBERON:0006241,6.09e-82,56;UBERON:0007135,6.09e-82,56;UBERON:0001869,2.19e-81,32;UBERON:0000955,1.23e-79,68;UBERON:0006238,1.23e-79,68;UBERON:0001893,2.00e-76,34;UBERON:0002791,1.17e-74,32;UBERON:0001017,1.82e-74,81;UBERON:0002780,3.12e-74,41;UBERON:0001890,3.12e-74,41;UBERON:0003080,3.12e-74,41;UBERON:0006240,3.12e-74,41;UBERON:0002619,8.72e-73,22;UBERON:0001016,2.65e-70,89;UBERON:0001950,5.81e-64,20;UBERON:0000956,6.91e-64,25;UBERON:0000203,6.91e-64,25;UBERON:0003075,3.49e-54,82;UBERON:0007284,3.49e-54,82;UBERON:0002346,2.20e-51,86;UBERON:0003056,2.10e-48,61;UBERON:0010371,2.01e-41,104;UBERON:0007023,4.31e-40,114;UBERON:0004121,9.07e-34,171;UBERON:0000924,9.07e-34,171;UBERON:0006601,9.07e-34,171;UBERON:0010314,1.49e-33,132;UBERON:0011216,2.41e-29,223;UBERON:0000349,3.65e-25,5;UBERON:0001872,5.77e-24,5;UBERON:0000369,1.26e-21,4;UBERON:0002435,1.26e-21,4;UBERON:0000204,1.26e-21,4;UBERON:0010082,1.26e-21,4;UBERON:0000025,4.95e-21,192;UBERON:0002420,1.26e-20,9;UBERON:0007245,1.26e-20,9;UBERON:0010009,1.26e-20,9;UBERON:0010011,1.26e-20,9;UBERON:0000454,1.26e-20,9;UBERON:0000125,3.54e-20,9;UBERON:0002308,3.54e-20,9;UBERON:0001871,2.84e-18,6;UBERON:0005383,9.60e-17,3;UBERON:0005382,9.60e-17,3;UBERON:0002021,1.28e-15,5;UBERON:0004111,1.86e-15,240;UBERON:0000988,3.43e-15,3;UBERON:0004733,8.30e-14,12;UBERON:0002028,8.30e-14,12;UBERON:0007277,8.30e-14,12;UBERON:0000200,2.98e-13,6;UBERON:0002298,3.74e-13,6;UBERON:0002680,4.46e-13,9;UBERON:0001895,4.46e-13,9;UBERON:0010092,4.46e-13,9;UBERON:0004732,1.05e-12,13;UBERON:0009663,2.12e-12,7;UBERON:0001873,1.03e-11,2;UBERON:0010122,1.03e-11,2;UBERON:0001876,2.22e-11,2;UBERON:0003076,6.18e-11,15;UBERON:0003057,6.18e-11,15;UBERON:0002148,1.05e-10,2;UBERON:0006331,1.05e-10,2;UBERON:0009662,1.05e-10,2;UBERON:0001954,1.16e-10,2;UBERON:0003022,1.16e-10,2;UBERON:0002421,1.16e-10,2;UBERON:0002600,1.16e-10,2;UBERON:0000483,1.23e-10,306;UBERON:0000119,1.82e-10,309;UBERON:0001870,1.54e-07,3;UBERON:0000923,3.53e-07,560;UBERON:0010316,3.53e-07,560;UBERON:0005291,3.53e-07,560;UBERON:0006598,3.53e-07,560;UBERON:0010317,3.53e-07,560;UBERON:0002532,3.53e-07,560;UBERON:0002050,4.52e-07,564;UBERON:0001874,9.91e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0.670065061337395,1.91381625495949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97659059106519,2.53204949538923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90799823828566,2.04089815956073,3.99227596002388,0,0,0,0,0,0,0,0,0,4.42870692906919,5.78862905401958,1.52581736317083,0.552896299656123,1.18219047581419,1.97446857438575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.876214728748802,0,3.27970224015475,0,0,0,0,0,5.50930970934882,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,2.59574263419103,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.958337652243951,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,1.59045937961861,2.04305109167363,0,0,0,0,0,2.91597871958518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55139547633861,2.24795422962573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,2.19647276823534,0.625954653532499,0,0.332787154610557,1.8628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646948868380091,0,0.218419276384028,0,0.212574920101683,0,1.11728983594649,0,0,3.20228299314188,0,0,3.91798273088403,1.41696576325585,0.478901577171454,2.05116364240755,2.26864526599546,1.31398779682014,1.77623210195036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68843961545987,1.56215619722769,1.03343398250592,1.45856363445986,3.82882366312754,0,0,0,0,0,0,0,0,0,0,0,1.90315252335129,2.10472875401117,0,0,0,8.64135744538011,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.701818390386317,0,0,0,0.219881033490858,0.603851374266694,0.154348316215889,0,0.940634592723046,0,0.235676547101626,0.785233868459781,0.297046400327086,0.8453114551668,0,0,0.0644578879735772,0,0,0,0,0,0,0.286679166302903,0,2.3117106664911,3.49080552272302,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,1.65833887891756,0.827463966895162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p3@HMP19 | |||
}} |
Latest revision as of 02:42, 17 September 2015
Short description: | p3@HMP19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HMP19_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 47bp_to_ENST00000519717_5end |
EntrezGene: | HMP19 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data