FFCP PHASE1:Hg19::chr6:17393604..17393619,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10486 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20039 | |||
|TSSclassifier=strong | |||
|UniProt=P40123,Q5JPJ8 | |||
|association_with_transcript=-116bp_to_NM_006366,uc003ncb.2,uc010jpk.1,uc011dja.1,uc011djb.1,uc011djc.1,uc011djd.1_5end | |||
|cluster_id=chr6:17393604..17393619,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_5_at_CAP2_5end | |||
|id=chr6:17393604..17393619,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.19e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!3.47e-28!86;UBERON:0000073!1.29e-27!94;UBERON:0001016!1.29e-27!94;UBERON:0001017!1.04e-26!82;UBERON:0001049!8.40e-25!57;UBERON:0005068!8.40e-25!57;UBERON:0006241!8.40e-25!57;UBERON:0007135!8.40e-25!57;UBERON:0007023!4.76e-23!115;UBERON:0003075!1.47e-22!86;UBERON:0007284!1.47e-22!86;UBERON:0000955!2.23e-21!69;UBERON:0006238!2.23e-21!69;UBERON:0002346!1.59e-20!90;UBERON:0000033!1.79e-20!123;UBERON:0004121!2.08e-20!169;UBERON:0002616!4.31e-20!59;UBERON:0000153!8.79e-20!129;UBERON:0007811!8.79e-20!129;UBERON:0000924!3.42e-19!173;UBERON:0006601!3.42e-19!173;UBERON:0003080!1.48e-17!42;UBERON:0002780!5.22e-17!41;UBERON:0001890!5.22e-17!41;UBERON:0006240!5.22e-17!41;UBERON:0000475!6.46e-17!365;UBERON:0002020!9.17e-16!34;UBERON:0003528!9.17e-16!34;UBERON:0001869!2.35e-15!32;UBERON:0001893!2.40e-15!34;UBERON:0002791!1.10e-14!33;UBERON:0000481!1.36e-14!347;UBERON:0003056!2.22e-14!61;UBERON:0001950!3.42e-14!20;UBERON:0002619!1.59e-13!22;UBERON:0000468!2.76e-12!659;UBERON:0000956!6.22e-12!25;UBERON:0000203!6.22e-12!25;UBERON:0000477!1.53e-11!286;UBERON:0004111!2.11e-10!241;UBERON:0000467!3.09e-10!625;UBERON:0000480!4.54e-10!626;UBERON:0000064!4.58e-10!219;UBERON:0000483!4.26e-09!309;UBERON:0000119!9.76e-09!312;UBERON:0000025!1.02e-08!194;UBERON:0003076!1.75e-08!15;UBERON:0003057!1.75e-08!15;UBERON:0000922!2.41e-08!612;UBERON:0000062!3.17e-08!511;UBERON:0002050!1.30e-07!605;UBERON:0005423!1.30e-07!605;UBERON:0000923!1.78e-07!604;UBERON:0005291!1.78e-07!604;UBERON:0006598!1.78e-07!604;UBERON:0002532!1.78e-07!604;UBERON:0004733!5.62e-07!12;UBERON:0002028!5.62e-07!12;UBERON:0007277!5.62e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.63e-34;20!UBERON:0002619;5.48e-34;22!UBERON:0001869;6.31e-30;32!UBERON:0003528;2.00e-29;34!UBERON:0002020;2.00e-29;34!UBERON:0000956;2.92e-29;25!UBERON:0000203;2.92e-29;25!UBERON:0002791;1.05e-27;32!UBERON:0001893;2.05e-27;34!UBERON:0000073;4.09e-25;53!UBERON:0002616;4.09e-25;53!UBERON:0002780;1.54e-23;41!UBERON:0001890;1.54e-23;41!UBERON:0000955;4.33e-18;68!UBERON:0001017;4.87e-18;75!UBERON:0001016;3.16e-15;83!UBERON:0000200;2.37e-12;6!UBERON:0002298;2.15e-11;6!UBERON:0004733;2.46e-11;12!UBERON:0002028;2.46e-11;12!UBERON:0001871;2.08e-10;6!UBERON:0002021;2.39e-10;5!UBERON:0004732;2.62e-10;13!UBERON:0001872;4.82e-10;5!UBERON:0007023;2.01e-08;114!UBERON:0002680;2.28e-07;9!UBERON:0001895;2.28e-07;9!UBERON:0011216;3.17e-07;132!UBERON:0000988;4.00e-07;3!UBERON:0001870;6.05e-07;3!UBERON:0000369;6.25e-07;4!UBERON:0002435;6.25e-07;4!UBERON:0000204;6.25e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.31e-47,56;UBERON:0005068,3.31e-47,56;UBERON:0006241,3.31e-47,56;UBERON:0007135,3.31e-47,56;UBERON:0000073,4.26e-45,53;UBERON:0002616,4.26e-45,53;UBERON:0001017,1.96e-41,81;UBERON:0000955,3.04e-38,68;UBERON:0006238,3.04e-38,68;UBERON:0001016,1.52e-37,89;UBERON:0003075,1.61e-36,82;UBERON:0007284,1.61e-36,82;UBERON:0001950,7.76e-35,20;UBERON:0003528,1.20e-34,34;UBERON:0002020,1.20e-34,34;UBERON:0002619,2.86e-34,22;UBERON:0002346,3.59e-34,86;UBERON:0002780,3.66e-34,41;UBERON:0001890,3.66e-34,41;UBERON:0003080,3.66e-34,41;UBERON:0006240,3.66e-34,41;UBERON:0001869,4.12e-34,32;UBERON:0001893,1.14e-31,34;UBERON:0002791,3.36e-31,32;UBERON:0000956,1.66e-29,25;UBERON:0000203,1.66e-29,25;UBERON:0007023,2.81e-28,114;UBERON:0010371,7.27e-26,104;UBERON:0003056,1.10e-24,61;UBERON:0010314,6.12e-22,132;UBERON:0004121,8.63e-21,171;UBERON:0000924,8.63e-21,171;UBERON:0006601,8.63e-21,171;UBERON:0011216,1.51e-19,223;UBERON:0003076,8.34e-14,15;UBERON:0003057,8.34e-14,15;UBERON:0000200,2.17e-12,6;UBERON:0002298,6.58e-12,6;UBERON:0004733,6.68e-12,12;UBERON:0002028,6.68e-12,12;UBERON:0007277,6.68e-12,12;UBERON:0004732,7.99e-11,13;UBERON:0000025,8.39e-11,192;UBERON:0002021,1.32e-10,5;UBERON:0001871,1.81e-10,6;UBERON:0001872,4.49e-10,5;UBERON:0004111,2.31e-09,240;UBERON:0002680,1.33e-07,9;UBERON:0001895,1.33e-07,9;UBERON:0010092,1.33e-07,9;UBERON:0000369,3.15e-07,4;UBERON:0002435,3.15e-07,4;UBERON:0000204,3.15e-07,4;UBERON:0010082,3.15e-07,4;UBERON:0000988,3.23e-07,3;UBERON:0000483,4.71e-07,306;UBERON:0000125,5.94e-07,9;UBERON:0002308,5.94e-07,9;UBERON:0001870,6.32e-07,3;UBERON:0000119,7.50e-07,309;UBERON:0002420,8.99e-07,9;UBERON:0007245,8.99e-07,9;UBERON:0010009,8.99e-07,9;UBERON:0010011,8.99e-07,9;UBERON:0000454,8.99e-07,9 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.281908808191942,2.00146596706261,0,0,2.53299878168311,0,0,0,0,0,0,0,0,0.672325146451775,1.20538905604795,0,0.487932798790507,0.369363174230364,0.204000691244253,0.313454721478088,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0.722878304769133,0,0.289693037921647,0,0,0.189069634328136,0,0.790513071238134,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71153252537342,0.66944122552934,0,0,0,0.367663080345869,0,0.267899184852239,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0.993943903390637,0.506522046658319,1.72131935057184,0,0,0.560677600142307,0,0.74000264525148,0.311211035399766,0.269421344139376,0,0,0,0,0,0.570471821544449,0,0.117434498643765,0,0,0.204154171254893,0.491337269247072,0,0,0.494533858557114,0,0,0.168336113954066,0,0.277064115484183,0.877955241761676,0,1.05166641234618,0.340296549480063,0.538168907066586,0.213557388818567,0,0.300091096084402,0.206105058476878,1.54584324027377,0.18611685633159,0.337552664482532,0.292311015483596,0,0.368199594569197,0.484938170456436,1.06502877754984,0.604512589365842,0.169560592310488,0.386521706326594,0.272746120590835,0.286804595389004,0.243947412259191,0.265059536642971,0.232387885739037,0.725627385107593,0,0.36497735907583,0,0,0,0,0,0.709840800239063,0.674338760312407,1.44606617930089,0.772057809126758,1.30727666455444,0.71181185733329,0.539325232640658,1.37355025587742,0.769494313892781,0,0,0,0,0,0,0,0,0.245976877086227,0.343135620597051,0.329250856225877,0,0,0.0925884451585296,0,0,0,0.34779121492523,0.587043471179108,0,0,0.190254152234598,0.790204397959275,0,0,0,0,0,0.335964256397719,0.283550194484773,0.179117045405697,0.581267877027924,0.766765358330422,0,0,0,0,0,0.063497894292169,0,0,0,0.205654985406647,0,0,0,0,0.07333828582095,0.517086863031111,0,0,0.797814349754612,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,1.09970290300263,0,0,0,1.4377491329495,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,1.01637849688985,2.60279707715243,0.773288812777695,2.17771144934653,0.637938751653163,0,0,0,0.12269149171914,0,0,0.207970861530807,0.356857977594324,0.473107245101804,0.937131319941706,0.601892199455438,0,0,0,0.184369168541703,0,0,0.343143423810856,0,0,0,0,0,0,0.992431231275107,1.68808170616869,0.841980283299221,1.40953064181271,0.511707249066704,0.482561763430822,0,0.308419387605311,0,0,0.519254429183621,0,0.483437798366489,0,0.276242966807689,0.229628896329213,0,0.262248829918848,0,0.231046011313244,0,0,0,0,0,0.431831832204279,0,0.270946437543853,0,0.509752546090077,0.831076008928724,0,0,0,1.02580050046556,0.328014645699706,1.95227036798582,2.26690225624989,0.54941678891006,1.07262349896764,0,0,0,1.06337790121334,0,0.15350367472613,0.275673144969061,0,0,0.170453254832202,1.4245125703478,0.495854746082934,0.192190067365106,0.255225424989168,0.6069466851333,0,0.31481234683064,0,0,1.06461206063404,0,0.37064843820784,0.572499546967965,0,0,0.571890581771475,0.255897791311334,0.42793898803392,0.318203247925937,0.78494864019923,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0.421258456238981,0.48763373908959,0.487426979262569,0,0.272999822815972,0,0,0.551365343546124,0,0.876901770507525,0,0,0.608731130888112,0.30982349809975,0.563391205064483,0,0.196498082026242,0.35667105148125,0,0.633322905892992,0,0.379473173765715,0,0.384888450902048,0,0,1.50630081242847,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.427296284509893,1.92495971052672,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0.293016358543788,0.849523652246594,0,0.284136146806413,0,0,0,2.98244294329889,2.11004124615769,0.333926115068718,0,0,0.398495976502139,0.276283915531148,1.25966373927138,0.409074730008619,0,0.311039587661807,0.0898683511473268,0,0,1.28236427328014,0,0,2.90799823828566,2.04089815956073,9.98068990005971,1.04171104434093,0.0874599999961957,1.44999915086959,0,0.254253650292766,0,0,0.583209226766509,0.173624994933292,1.77148277162768,1.20596438625408,3.05163472634166,1.54810963903714,1.77328571372128,2.63262476584767,0.32681539055697,0,0.692552326534174,1.48124672601102,0.46112780877612,0.179515288819544,0,0.31900115973192,0.366390373607449,0,0,0,0,0,0,0,0,0,0.632994193584081,0.163232808159148,0.141353071433941,0,0,0.176915129006678,1.22206028986725,0,0,0,0.67401132980677,2.40773294189637,2.34264445725339,0,0,0.485560759068186,0.789168805698781,0,7.34574627913176,0.126373159256976,0.300646838828985,0.518440956986236,0.664653872707185,0.661983911750998,0.313932918407225,0,0,0.138674673013139,0,0.587954384486266,0.261177619741208,0.52418000472609,0.51595809741485,0.19351266257817,0.365446585430928,0.492692742319255,0.484945082442097,0.264768380074501,0.451961481561065,0.137041924646751,0.397429223405979,2.34249945036751,0.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| |||
|short_description=p5@CAP2 | |||
}} |
Latest revision as of 00:32, 17 September 2015
Short description: | p5@CAP2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CAP2_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -116bp_to_NM_006366, uc003ncb.2, uc010jpk.1, uc011dja.1, uc011djb.1, uc011djc.1, uc011djd.1_5end |
EntrezGene: | CAP2 |
HGNC: | 20039 |
UniProt: | P40123Q5JPJ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data